Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G2817 Fragaria x ananassa HOM05D005514 ORTHO05D006563 6.3e-211 737.3 392 100.0
FAN19G0406 Fragaria x ananassa HOM05D005514 ORTHO05D006563 1.0e-200 703.4 392 96.2
FvH4_1g04330 Fragaria vesca HOM05D005514 ORTHO05D006563 5.9e-185 651.0 392 90.8
FAN23G0542 Fragaria x ananassa HOM05D005514 ORTHO05D006563 8.0e-166 587.4 301 96.0
RcHm_v2.0_Chr2g0089981 Rosa chinensis HOM05D005514 ORTHO05D006563 5.8e-164 581.3 356 82.3
MD02G1042900 Malus domestica HOM05D005514 ORTHO05D006563 3.2e-130 469.2 362 69.3
Prupe.7G234000 Prunus persica HOM05D005514 ORTHO05D006563 1.0e-120 437.6 301 75.4
QL02p045925 Quercus lobata HOM05D005514 ORTHO05D006563 3.7e-118 429.1 377 63.4
Thecc.09G107100 Theobroma cacao HOM05D005514 ORTHO05D006563 2.7e-113 412.9 360 63.1
CiPaw.04G162600 Carya illinoinensis HOM05D005514 ORTHO05D006563 2.6e-108 396.4 364 60.7
Duzib168G0165 Durio zibethinus HOM05D005514 ORTHO05D006563 3.4e-108 396.0 361 59.3
CANSAT02G0006 Cannabis sativa HOM05D005514 ORTHO05D006563 1.7e-107 393.7 360 60.3
CiPaw.03G229100 Carya illinoinensis HOM05D005514 ORTHO05D006563 7.2e-106 388.3 361 62.6
AUR62010955 Chenopodium quinoa HOM05D005514 ORTHO05D006563 2.1e-105 386.7 363 59.0
MD15G1181700 Malus domestica HOM05D005514 ORTHO05D006563 1.9e-103 380.2 308 65.6
Dinv36656 Davidia involucrata HOM05D005514 ORTHO05D006563 4.1e-101 372.5 308 66.6
Gohir.D08G262600 Gossypium hirsutum HOM05D005514 ORTHO05D006563 5.3e-101 372.1 364 58.2
Sabra06G0124000 Salix brachista HOM05D005514 ORTHO05D006563 3.4e-100 369.4 359 59.3
Gorai.004G280600 Gossypium raimondii HOM05D005514 ORTHO05D006563 8.5e-99 364.8 362 58.0
Cfa003235 Carpinus fangiana HOM05D005514 ORTHO05D006563 5.5e-98 362.1 310 64.8
Dinv41624 Davidia involucrata HOM05D005514 ORTHO05D006563 2.7e-97 359.8 307 65.1
Oeu002248.1 Olea europaea HOM05D005514 ORTHO05D006563 6.1e-97 358.6 366 57.9
Duzib150G0489 Durio zibethinus HOM05D005514 ORTHO05D006563 6.7e-96 355.1 361 56.5
Phvul.004G165700 Phaseolus vulgaris HOM05D005514 ORTHO05D006563 8.8e-96 354.8 362 56.6
Gohir.A08G241800 Gossypium hirsutum HOM05D005514 ORTHO05D006563 1.1e-95 354.4 363 58.4
Hma1.2p1_1151F.1_g261950 Hydrangea macrophylla HOM05D005514 ORTHO05D006563 4.4e-95 352.4 358 56.1
CSS0000167 Camellia sinensis var. sinensis HOM05D005514 ORTHO05D006563 9.7e-95 351.3 334 62.0
EL10Ac8g18440 Beta vulgaris HOM05D005514 ORTHO05D006563 1.3e-94 350.9 364 55.5
Glyma.09G192400 Glycine max HOM05D005514 ORTHO05D006563 1.3e-94 350.9 362 56.4
CsaV3_1G045730 Cucumis sativus L. HOM05D005514 ORTHO05D006563 1.4e-93 347.4 375 53.6
MELO3C024688.2 Cucumis melo HOM05D005514 ORTHO05D006563 1.8e-93 347.1 375 53.3
Ciclev10008655m.g Citrus clementina HOM05D005514 ORTHO05D006563 3.1e-93 346.3 377 55.4
Ca_25539_v3 Cicer arietinum L. HOM05D005514 ORTHO05D006563 7.7e-92 341.7 370 54.1
Manes.03G023100 Manihot esculenta HOM05D005514 ORTHO05D006563 1.0e-91 341.3 304 63.2
Eucgr.C01267 Eucalyptus grandis HOM05D005514 ORTHO05D006563 3.8e-91 339.3 360 52.8
Atru.chr7.1371 Acer truncatum HOM05D005514 ORTHO05D006563 5.0e-91 339.0 377 54.6
Hund09218 Selenicereus undatus HOM05D005514 ORTHO05D006563 1.9e-90 337.0 395 53.4
Glyma.07G084500 Glycine max HOM05D005514 ORTHO05D006563 2.1e-89 333.6 366 54.6
VMungo0464G0467 Vigna mungo HOM05D005514 ORTHO05D006563 4.7e-89 332.4 308 61.4
Cc06_g09930 Coffea canephora HOM05D005514 ORTHO05D006563 2.6e-87 326.6 299 60.5
ClCG06G008760 Citrullus lanatus HOM05D005514 ORTHO05D006563 7.4e-87 325.1 323 56.3
Lalb_Chr24g0397401 Lupinus albus HOM05D005514 ORTHO05D006563 7.4e-87 325.1 310 59.7
vmacro06229 Vaccinium macrocarpon HOM05D005514 ORTHO05D006563 3.7e-86 322.8 320 59.7
Nitab4.5_0000952g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 4.8e-86 322.4 358 53.4
Nitab4.5_0000010g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 6.3e-86 322.0 352 53.1
Lalb_Chr22g0352701 Lupinus albus HOM05D005514 ORTHO05D006563 9.1e-85 318.2 363 54.0
Lj2g0026530 Lotus japonicus HOM05D005514 ORTHO05D006563 7.7e-84 315.1 410 49.0
Actinidia32673 Actinidia chinensis HOM05D005514 ORTHO05D006563 2.9e-83 313.2 332 57.8
Ah.07g205470 Amaranthus hybridus HOM05D005514 ORTHO05D006563 2.5e-82 310.1 366 51.1
Sed0026603 Sechium edule HOM05D005514 ORTHO05D006563 5.5e-82 308.9 435 44.8
Actinidia07405 Actinidia chinensis HOM05D005514 ORTHO05D006563 2.7e-81 306.6 364 55.2
Psat1g044240 Pisum sativum HOM05D005514 ORTHO05D006563 2.7e-81 306.6 384 51.8
Peaxi162Scf00031g00232 Petunia axillaris HOM05D005514 ORTHO05D006563 3.6e-81 306.2 346 51.2
arahy.Tifrunner.gnm1.ann1.LW2ZPS Arachis hypogaea HOM05D005514 ORTHO05D006563 4.7e-81 305.8 306 57.5
AUR62021464 Chenopodium quinoa HOM05D005514 ORTHO05D006563 2.3e-80 303.5 363 51.5
arahy.Tifrunner.gnm1.ann1.7WD3SA Arachis hypogaea HOM05D005514 ORTHO05D006563 3.0e-80 303.1 306 57.2
CAN.G148.5 Capsicum annuum HOM05D005514 ORTHO05D006563 3.0e-80 303.1 351 51.0
TAR383G0343 Trochodendron aralioides HOM05D001777 ORTHO05D001809 5.2e-80 302.4 359 51.5
Potri.006G160500 Populus trichocarpa HOM05D005514 ORTHO05D006563 3.7e-78 296.2 359 52.6
Potri.018G083100 Populus trichocarpa HOM05D005514 ORTHO05D006563 1.4e-77 294.3 377 50.9
MSTRG.10624 Avicennia marina HOM05D005514 ORTHO05D006563 1.8e-77 293.9 348 49.7
Sed0015833 Sechium edule HOM05D005514 ORTHO05D006563 4.1e-77 292.7 372 49.7
Lalb_Chr14g0371621 Lupinus albus HOM05D005514 ORTHO05D006563 5.3e-77 292.4 309 56.3
Cpa.g.sc23.79 Carica papaya HOM05D005514 ORTHO05D006563 7.0e-77 292.0 358 47.2
Medtr6g087890 Medicago truncatula HOM05D005514 ORTHO05D006563 5.9e-76 288.9 369 51.8
Oeu064593.1 Olea europaea HOM05D005514 ORTHO05D006563 5.9e-76 288.9 332 53.6
Nn2g11677 Nelumbo nucifera HOM05D005514 ORTHO05D006563 6.8e-72 275.4 364 47.8
Haze_25771 Corylus avellana HOM05D005514 ORTHO05D006563 1.5e-71 274.2 231 66.7
COL.COLO4_34823 Corchorus olitorius HOM05D005514 ORTHO05D006563 4.4e-71 272.7 305 49.8
TPR.G10049 Trifolium pratense HOM05D005514 ORTHO05D006563 8.3e-70 268.5 407 45.9
HanXRQChr10g0318661 Helianthus annuus HOM05D005514 ORTHO05D006563 1.8e-69 267.3 373 48.3
Sc18g0001310 Simmondsia chinensis HOM05D005514 ORTHO05D006563 4.1e-69 266.2 364 50.0
TWI23G1143 Tripterygium wilfordii HOM05D005514 ORTHO05D006563 5.4e-69 265.8 342 48.8
Solyc05g018340.4 Solanum lycopersicum HOM05D005514 ORTHO05D006563 5.9e-68 262.3 358 47.8
Sopen05g015140 Solanum pennellii HOM05D005514 ORTHO05D006563 5.9e-68 262.3 358 47.8
TAR624G0612 Trochodendron aralioides HOM05D005514 ORTHO05D006563 5.5e-66 255.8 278 52.9
PGSC0003DMG400027426 Solanum tuberosum HOM05D005514 ORTHO05D006563 1.2e-63 248.1 308 50.0
ECA234G0189 Erigeron canadensis HOM05D005514 ORTHO05D006563 4.9e-62 242.7 387 44.2
MSTRG.26360 Avicennia marina HOM05D005514 ORTHO05D006563 1.1e-61 241.5 298 48.3
PSO782G4531 Papaver somniferum HOM05D005514 ORTHO05D006563 1.4e-61 241.1 397 43.6
DCAR_028696 Daucus carota HOM05D005514 ORTHO05D006563 2.0e-60 237.3 399 42.4
GSVIVG01015362001 Vitis vinifera HOM05D005514 ORTHO05D006563 7.8e-60 235.3 174 68.4
MBI04_g19180_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 1.1e-58 231.5 309 47.9
MBI14_g08031_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 3.6e-57 226.5 313 47.9
PGR142G2557 Punica granatum HOM05D005514 ORTHO05D006563 5.2e-56 222.6 360 44.4
PSO566G0157 Papaver somniferum HOM05D005514 ORTHO05D006563 1.5e-55 221.1 388 43.3
Rhsim03G0240000 Rhododendron simsii HOM05D005514 ORTHO05D006563 4.9e-54 216.1 225 57.8
Aqoxy7G01583 Aquilegia oxysepala HOM05D005514 ORTHO05D006563 1.8e-53 214.2 274 51.8
THA.LOC104804022 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 3.0e-51 206.8 367 44.4
THA.LOC104820053 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 4.3e-50 203.0 320 45.3
Sabra18G0070900 Salix brachista HOM05D005514 ORTHO05D006563 2.1e-49 200.7 197 54.3
Aa31LG8G17060 Aethionema arabicum HOM05D005514 ORTHO05D006563 1.2e-47 194.9 323 44.3
SEGI_01979 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 8.3e-46 188.7 437 36.6
Migut.K00501 Erythranthe guttata HOM05D005514 ORTHO05D006563 7.0e-45 185.7 353 44.2
Sp7g26930 Schrenkiella parvula HOM05D005514 ORTHO05D006563 7.8e-44 182.2 329 44.4
CDE05G1480 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 1.3e-43 181.4 286 46.2
Thhalv10025603m.g Eutrema salsugineum HOM05D005514 ORTHO05D006563 1.7e-43 181.0 379 39.8
CARHR236720 Cardamine hirsuta HOM05D005514 ORTHO05D006563 1.1e-42 178.3 324 43.5
ATR0315G038 Amborella trichopoda HOM05D005514 ORTHO05D006563 5.6e-42 176.0 342 41.5
Lj7A655G38 Lonicera japonica HOM05D005514 ORTHO05D006563 2.0e-39 167.5 224 50.0
AL7G23470 Arabidopsis lyrata HOM05D005514 ORTHO05D006563 1.7e-38 164.5 377 38.7
CDE05G2615 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 1.4e-37 161.4 305 40.7
Carub.0007s1165 Capsella rubella HOM05D005514 ORTHO05D006563 7.1e-37 159.1 332 41.6
AT4G28990 Arabidopsis thaliana HOM05D005514 ORTHO05D006563 6.0e-36 156.0 326 41.4
Lsat_1_v5_gn_5_102941 Lactuca sativa HOM05D005514 ORTHO05D006563 2.3e-35 154.1 234 44.0
BcaNung00443 Brassica carinata HOM05D005514 ORTHO05D006563 8.1e-33 145.6 317 39.4
Nn3g18098 Nelumbo nucifera HOM05D005514 ORTHO05D006563 6.8e-32 142.5 169 48.5
BcaNung01339 Brassica carinata HOM05D005514 ORTHO05D006563 3.4e-31 140.2 323 40.2
A01p08990 Brassica napus HOM05D001777 ORTHO05D006510 1.9e-29 134.4 303 38.6
Zm00001eb147430 Zea mays HOM05D005514 ORTHO05D006563 2.4e-29 134.0 326 37.1
BolC1t01016H Brassica oleracea HOM05D001777 ORTHO05D006510 9.2e-29 132.1 306 39.5
C01p10530 Brassica napus HOM05D001777 ORTHO05D006510 1.6e-28 131.3 307 37.8
BraA03t14917Z Brassica rapa HOM05D005514 ORTHO05D006563 2.7e-28 130.6 289 40.8
Os06g0332900 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 7.8e-28 129.0 322 37.0
BcaNung00440 Brassica carinata HOM05D005514 ORTHO05D006563 3.0e-27 127.1 290 39.3
HPP92_000517 Vanilla planifolia HOM05D005514 ORTHO05D006563 8.6e-27 125.6 321 36.4
BcaC09g51675 Brassica carinata HOM05D005514 ORTHO05D006563 9.6e-26 122.1 313 36.4
BcaNung02893 Brassica carinata HOM05D005514 ORTHO05D006563 9.9e-23 112.1 376 33.5
C07p56560 Brassica napus HOM05D005514 ORTHO05D006563 9.9e-23 112.1 376 33.5
Mapoly0001s0121 Marchantia polymorpha HOM05D005514 ORTHO05D006563 3.8e-22 110.2 319 36.4
Pp3c14_23580 Physcomitrium patens HOM05D005514 ORTHO05D006563 6.4e-22 109.4 343 35.3
BolC7t46134H Brassica oleracea HOM05D005514 ORTHO05D006563 4.2e-21 106.7 286 36.7
SEGI_18875 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 7.1e-21 105.9 381 33.3
Os02g0274700 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 5.6e-18 96.3 283 36.7
SMO169G0168 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 5.3e-16 89.7 187 39.0
SGA_v2.0_scaffold92G28280 Striga asiatica HOM05D005514 ORTHO05D006563 6.4e-14 82.8 238 34.0
CBR_g44542 Chara braunii HOM05D005514 ORTHO05D006563 1.8e-11 74.7 239 32.2
RcHm_v2.0_Chr2g0088791 Rosa chinensis HOM05D005514 ORTHO05D006563 6.7e-11 72.8 41 85.4
AagrBONN_evm.TU.Sc2ySwM_344.197 Anthoceros agrestis HOM05D005514 ORTHO05D006563 1.9e-10 71.2 130 38.5
SMO116G0230 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 1.6e-09 68.2 37 73.0
unitig_0.g2554 Utricularia gibba HOM05D005514 ORTHO05D006563 4.9e-06 56.6 132 37.1


User provided reference genes

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