Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G2758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 6.6e-51 203.8 104 100.0
FAN23G1758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 1.9e-50 202.2 104 99.0
RcHm_v2.0_Chr2g0085261 Rosa chinensis HOM05D006914 ORTHO05D008583 3.6e-49 198.0 104 96.2
FvH4_1g00640 Fragaria vesca HOM05D006914 ORTHO05D008583 4.0e-48 194.5 104 94.2
MD15G1149500 Malus domestica HOM05D006914 ORTHO05D008583 5.4e-45 184.1 104 89.4
Nn8g40004 Nelumbo nucifera HOM05D006914 ORTHO05D008583 7.1e-45 183.7 105 87.6
Prupe.7G265800 Prunus persica HOM05D006914 ORTHO05D008583 2.1e-44 182.2 104 88.5
MD02G1005200 Malus domestica HOM05D006914 ORTHO05D008583 6.0e-44 180.6 104 87.5
Thecc.09G152600 Theobroma cacao HOM05D006914 ORTHO05D008583 7.9e-44 180.3 104 84.6
Ciclev10009995m.g Citrus clementina HOM05D006914 ORTHO05D008583 3.0e-43 178.3 104 83.7
CSS0049762 Camellia sinensis var. sinensis HOM05D006914 ORTHO05D008583 3.9e-43 177.9 105 86.7
Hund04582 Selenicereus undatus HOM05D000185 ORTHO05D000105 3.9e-43 177.9 101 87.1
Atru.chr7.325 Acer truncatum HOM05D006914 ORTHO05D008583 1.1e-42 176.4 104 82.7
Gohir.D08G256600 Gossypium hirsutum HOM05D006914 ORTHO05D008583 1.5e-42 176.0 104 81.7
Gorai.004G273700 Gossypium raimondii HOM05D006914 ORTHO05D008583 1.5e-42 176.0 104 81.7
Dinv41349 Davidia involucrata HOM05D006914 ORTHO05D008583 2.5e-42 175.3 99 88.9
PGR102G2895 Punica granatum HOM05D006914 ORTHO05D008583 3.3e-42 174.9 104 79.8
GSVIVG01008452001 Vitis vinifera HOM05D006914 ORTHO05D008583 4.3e-42 174.5 105 84.8
HanXRQChr03g0066101 Helianthus annuus HOM05D006914 ORTHO05D008583 1.3e-41 172.9 105 83.8
Cpa.g.sc46.184 Carica papaya HOM05D006914 ORTHO05D008583 1.6e-41 172.6 104 84.6
ECA240G0809 Erigeron canadensis HOM05D006914 ORTHO05D008583 1.6e-41 172.6 103 84.5
COL.COLO4_23940 Corchorus olitorius HOM05D006914 ORTHO05D008583 2.1e-41 172.2 102 82.4
Hma1.2p1_2085F.1_g313670 Hydrangea macrophylla HOM05D006914 ORTHO05D008583 6.2e-41 170.6 103 81.6
QL02p093962 Quercus lobata HOM05D006914 ORTHO05D008583 6.2e-41 170.6 102 82.4
Nitab4.5_0001448g0020 Nicotiana tabacum HOM05D006914 ORTHO05D008583 8.1e-41 170.2 104 81.7
CiPaw.15G165400 Carya illinoinensis HOM05D006914 ORTHO05D008583 1.1e-40 169.9 104 81.7
TWI34G0278 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 1.1e-40 169.9 104 81.7
Potri.006G181400 Populus trichocarpa HOM05D006914 ORTHO05D008583 1.8e-40 169.1 104 80.8
Duzib150G1072 Durio zibethinus HOM05D006914 ORTHO05D008583 3.1e-40 168.3 102 80.4
Duzib187G0910 Durio zibethinus HOM05D006914 ORTHO05D008583 3.1e-40 168.3 102 80.4
Lsat_1_v5_gn_7_49520 Lactuca sativa HOM05D006914 ORTHO05D008583 3.1e-40 168.3 102 81.4
Glyma.04G155300 Glycine max HOM05D006914 ORTHO05D008583 5.3e-40 167.5 104 80.8
Cfa020795 Carpinus fangiana HOM05D006914 ORTHO05D008583 6.9e-40 167.2 103 78.6
MELO3C004120.2 Cucumis melo HOM05D006914 ORTHO05D008583 1.2e-39 166.4 104 76.9
CANSAT56G0295 Cannabis sativa HOM05D006914 ORTHO05D008583 2.0e-39 165.6 102 80.4
AUR62015440 Chenopodium quinoa HOM05D006914 ORTHO05D008583 2.0e-39 165.6 102 79.4
TWI63G1652 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 2.0e-39 165.6 104 78.8
EL10Ac3g05865 Beta vulgaris HOM05D006914 ORTHO05D008583 2.6e-39 165.2 102 79.4
Nitab4.5_0009003g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 2.6e-39 165.2 101 80.2
TPR.G25932 Trifolium pratense HOM05D006914 ORTHO05D008583 2.6e-39 165.2 104 76.0
Nitab4.5_0000233g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 3.4e-39 164.9 101 80.2
ClCG02G014340 Citrullus lanatus HOM05D006914 ORTHO05D008583 4.5e-39 164.5 104 76.0
Phvul.007G242700 Phaseolus vulgaris HOM05D006914 ORTHO05D008583 7.6e-39 163.7 104 78.8
Ah.13g066550 Amaranthus hybridus HOM05D006914 ORTHO05D008583 9.9e-39 163.3 101 77.2
Sed0012601 Sechium edule HOM05D006914 ORTHO05D008583 2.2e-38 162.2 104 77.9
Glyma.06G225000 Glycine max HOM05D006914 ORTHO05D008583 2.9e-38 161.8 104 76.9
Lalb_Chr11g0072501 Lupinus albus HOM05D006914 ORTHO05D008583 2.9e-38 161.8 104 76.0
Sed0026010 Sechium edule HOM05D006914 ORTHO05D008583 3.8e-38 161.4 104 77.9
Aqoxy5G02159 Aquilegia oxysepala HOM05D006914 ORTHO05D008583 4.9e-38 161.0 103 78.6
AUR62002229 Chenopodium quinoa HOM05D006914 ORTHO05D008583 1.1e-37 159.8 100 77.0
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 3.2e-37 158.3 97 80.4
Actinidia23563 Actinidia chinensis HOM05D006914 ORTHO05D008583 7.1e-37 157.1 95 81.1
Manes.14G142700 Manihot esculenta HOM05D006914 ORTHO05D008583 7.1e-37 157.1 97 79.4
Medtr2g046160 Medicago truncatula HOM05D006914 ORTHO05D008583 7.1e-37 157.1 104 74.0
Ca_02367_v3 Cicer arietinum L. HOM05D006914 ORTHO05D008583 9.3e-37 156.8 99 77.8
TAR383G0505 Trochodendron aralioides HOM05D006914 ORTHO05D008583 2.1e-36 155.6 91 85.7
VMungo0720G1978 Vigna mungo HOM05D006914 ORTHO05D008583 2.7e-36 155.2 102 76.5
Actinidia28379 Actinidia chinensis HOM05D006914 ORTHO05D008583 7.9e-36 153.7 90 84.4
CsaV3_2G007660 Cucumis sativus L. HOM05D006914 ORTHO05D008583 7.9e-36 153.7 95 78.9
MSTRG.10711 Avicennia marina HOM05D006914 ORTHO05D008583 1.0e-35 153.3 100 77.0
PSO111G0010 Papaver somniferum HOM05D006914 ORTHO05D008583 1.3e-35 152.9 99 74.7
Migut.K00305 Erythranthe guttata HOM05D006914 ORTHO05D008583 1.8e-35 152.5 99 75.8
Lj6g0027463 Lotus japonicus HOM05D006914 ORTHO05D008583 2.3e-35 152.1 104 71.2
Psat1g017920 Pisum sativum HOM05D006914 ORTHO05D008583 8.7e-35 150.2 104 72.1
Peaxi162Scf00156g01316 Petunia axillaris HOM05D006914 ORTHO05D008583 1.9e-34 149.1 97 75.3
CDE05G0490 Ceratophyllum demersum HOM05D006914 ORTHO05D008583 5.6e-34 147.5 105 71.4
Cc06_g14590 Coffea canephora HOM05D006914 ORTHO05D008583 7.4e-34 147.1 100 76.0
Sopen05g034470 Solanum pennellii HOM05D006914 ORTHO05D008583 8.1e-33 143.7 89 76.4
AT5G57860 Arabidopsis thaliana HOM05D006914 ORTHO05D008583 1.1e-32 143.3 91 76.9
CARHR271600 Cardamine hirsuta HOM05D006914 ORTHO05D008583 1.1e-32 143.3 91 79.1
Oeu055276.1 Olea europaea HOM05D006914 ORTHO05D008583 1.8e-32 142.5 103 71.8
Sp6g19550 Schrenkiella parvula HOM05D006914 ORTHO05D008583 1.8e-32 142.5 91 76.9
ATR0763G197 Amborella trichopoda HOM05D006914 ORTHO05D008583 2.4e-32 142.1 100 69.0
Carub.0008s1839 Capsella rubella HOM05D006914 ORTHO05D008583 6.9e-32 140.6 91 75.8
Oeu021334.1 Olea europaea HOM05D006914 ORTHO05D008583 9.0e-32 140.2 102 70.6
unitig_748.g7196 Utricularia gibba HOM05D006914 ORTHO05D008583 1.2e-31 139.8 89 76.4
AL8G33910 Arabidopsis lyrata HOM05D006914 ORTHO05D008583 1.5e-31 139.4 89 77.5
Thhalv10015128m.g Eutrema salsugineum HOM05D006914 ORTHO05D008583 3.4e-31 138.3 91 73.6
Aa31LG3G13700 Aethionema arabicum HOM05D006914 ORTHO05D008583 1.0e-30 136.7 91 73.6
HPP92_020604 Vanilla planifolia HOM05D006914 ORTHO05D008583 1.3e-30 136.3 90 75.6
A03p12500 Brassica napus HOM05D006914 ORTHO05D008583 2.9e-30 135.2 91 72.5
C02p13800 Brassica napus HOM05D006914 ORTHO05D008583 2.9e-30 135.2 89 74.2
BolC2t07499H Brassica oleracea HOM05D006914 ORTHO05D008583 2.9e-30 135.2 89 74.2
TAR626G0439 Trochodendron aralioides HOM05D006914 ORTHO05D008583 2.9e-30 135.2 76 89.5
Os03g0364000 Oryza sativa ssp. japonica HOM05D006914 ORTHO05D008583 3.8e-30 134.8 94 75.5
BolC3t13912H Brassica oleracea HOM05D006914 ORTHO05D008583 8.4e-30 133.7 89 74.2
A02p08150 Brassica napus HOM05D006914 ORTHO05D008583 2.5e-29 132.1 91 70.3
Rhsim03G0258700 Rhododendron simsii HOM05D000079 ORTHO05D000211 2.5e-29 132.1 92 78.3
BraA03t10565Z Brassica rapa HOM05D006914 ORTHO05D008583 4.2e-29 131.3 89 71.9
Eucgr.C02509 Eucalyptus grandis HOM05D006914 ORTHO05D008583 7.1e-29 130.6 76 85.5
C09p49750 Brassica napus HOM05D006914 ORTHO05D008583 9.3e-29 130.2 91 69.2
Zm00001eb329210 Zea mays HOM05D006914 ORTHO05D008583 1.6e-28 129.4 93 68.8
vmacro06059 Vaccinium macrocarpon HOM05D000079 ORTHO05D000211 1.3e-27 126.3 75 84.0
Haze_19153 Corylus avellana HOM05D006914 ORTHO05D008583 8.7e-27 123.6 76 80.3
PGSC0003DMG400023462 Solanum tuberosum HOM05D006914 ORTHO05D008583 1.1e-26 123.2 76 77.6
PSO782G4630 Papaver somniferum HOM05D006914 ORTHO05D008583 3.3e-26 121.7 99 61.6
CAN.G694.81 Capsicum annuum HOM05D006914 ORTHO05D008583 9.6e-26 120.2 75 78.7
arahy.Tifrunner.gnm1.ann1.6E7PQ4 Arachis hypogaea HOM05D006914 ORTHO05D008583 1.3e-25 119.8 74 81.1
arahy.Tifrunner.gnm1.ann1.S2MTQV Arachis hypogaea HOM05D006914 ORTHO05D008583 3.7e-25 118.2 74 79.7
BraA02t05889Z Brassica rapa HOM05D006914 ORTHO05D008583 8.2e-25 117.1 79 72.2
SGA_v2.0_scaffold222G42803 Striga asiatica HOM05D006914 ORTHO05D008583 1.4e-24 116.3 75 77.3
BcaB05g22379 Brassica carinata HOM05D006914 ORTHO05D008583 1.2e-23 113.2 89 67.4
Gohir.A08G236100 Gossypium hirsutum HOM05D006914 ORTHO05D008583 5.8e-23 110.9 64 82.8
AagrBONN_evm.TU.Sc2ySwM_362.2477 Anthoceros agrestis HOM05D006914 ORTHO05D008583 1.7e-22 109.4 92 64.1
Pp3c19_17380 Physcomitrium patens HOM05D006914 ORTHO05D008583 1.7e-22 109.4 100 59.0
Mapoly0004s0198 Marchantia polymorpha HOM05D006914 ORTHO05D008583 1.9e-21 105.9 85 62.4
SMO304G0019 Selaginella moellendorffii HOM05D006914 ORTHO05D008583 1.3e-19 99.8 73 65.8
Sc13g0007320 Simmondsia chinensis HOM05D006914 ORTHO05D008583 1.3e-19 99.8 64 78.1
CBR_g51779 Chara braunii HOM05D006914 ORTHO05D008583 1.8e-19 99.4 96 55.2
AagrBONN_evm.TU.Sc2ySwM_228.3148 Anthoceros agrestis HOM05D006914 ORTHO05D008583 1.1e-16 90.1 78 55.1
Cre12.g554750 Chlamydomonas reinhardtii HOM05D006914 ORTHO05D008583 1.1e-16 90.1 86 54.7
Pp3c17_5060 Physcomitrium patens HOM05D006914 ORTHO05D008583 1.1e-16 90.1 98 53.1
Aa31LG1G14450 Aethionema arabicum HOM05D006914 ORTHO05D008583 5.3e-16 87.8 75 61.3
Haze_19154 Corylus avellana HOM05D002983 ORTHO05D003451 5.3e-16 87.8 62 75.8
SHI02838 Sapria himalayana HOM05D006914 ORTHO05D008583 2.5e-13 79.0 87 49.4
PRCOL_00002080 Prasinoderma coloniale HOM05D006914 ORTHO05D008583 5.5e-13 77.8 86 53.5
BcaC04g19922 Brassica carinata HOM05D006914 ORTHO05D008583 6.7e-11 70.9 51 68.6
MCO12G243 Micromonas commoda HOM05D006914 ORTHO05D008583 1.5e-07 59.7 109 38.5
C08p16940 Brassica napus HOM05D006914 ORTHO05D008583 3.4e-07 58.5 37 70.3


User provided reference genes

Program Settings