Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G2670 Fragaria x ananassa HOM05D007446 ORTHO05D009376 3.7e-42 174.5 89 100.0
FvH4_1g11510 Fragaria vesca HOM05D007446 ORTHO05D009376 1.0e-39 166.4 85 98.8
RcHm_v2.0_Chr2g0099131 Rosa chinensis HOM05D007446 ORTHO05D009376 8.5e-39 163.3 85 97.6
FAN23G0535 Fragaria x ananassa HOM05D000971 ORTHO05D000901 2.0e-35 152.1 79 96.2
Prupe.7G170900 Prunus persica HOM05D007446 ORTHO05D009376 3.3e-35 151.4 85 89.4
MD02G1128000 Malus domestica HOM05D007446 ORTHO05D009376 1.3e-34 149.4 85 88.2
Cfa006995 Carpinus fangiana HOM05D007446 ORTHO05D009376 1.3e-31 139.4 80 87.5
Haze_03737 Corylus avellana HOM05D007446 ORTHO05D009376 2.2e-31 138.7 80 86.2
CiPaw.08G130000 Carya illinoinensis HOM05D007446 ORTHO05D009376 2.9e-31 138.3 80 86.2
GSVIVG01018747001 Vitis vinifera HOM05D007446 ORTHO05D009376 3.8e-31 137.9 80 85.0
CsaV3_6G047300 Cucumis sativus L. HOM05D007446 ORTHO05D009376 5.0e-31 137.5 84 82.1
Dinv40111 Davidia involucrata HOM05D007446 ORTHO05D009376 6.5e-31 137.1 81 84.0
Atru.chr3.842 Acer truncatum HOM05D007446 ORTHO05D009376 1.1e-30 136.3 80 83.8
ClCG01G020420 Citrullus lanatus HOM05D007446 ORTHO05D009376 1.1e-30 136.3 80 83.8
Rhsim10G0209600 Rhododendron simsii HOM05D007446 ORTHO05D009376 2.5e-30 135.2 80 83.8
vmacro22147 Vaccinium macrocarpon HOM05D007446 ORTHO05D009376 4.2e-30 134.4 80 83.8
FAN19G2392 Fragaria x ananassa HOM05D000971 ORTHO05D000901 7.2e-30 133.7 68 98.5
Cpa.g.sc6.279 Carica papaya HOM05D007446 ORTHO05D009376 1.2e-29 132.9 80 83.8
FAN28G0109 Fragaria x ananassa HOM05D000971 ORTHO05D000901 1.2e-29 132.9 70 94.3
Actinidia17426 Actinidia chinensis HOM05D007446 ORTHO05D009376 2.7e-29 131.7 80 83.8
Hma1.2p1_0869F.1_g230750 Hydrangea macrophylla HOM05D007446 ORTHO05D009376 2.7e-29 131.7 79 82.3
TWI09G0145 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 2.7e-29 131.7 80 81.2
arahy.Tifrunner.gnm1.ann1.786IJB Arachis hypogaea HOM05D007446 ORTHO05D009376 3.6e-29 131.3 80 82.5
arahy.Tifrunner.gnm1.ann1.RW313X Arachis hypogaea HOM05D007446 ORTHO05D009376 3.6e-29 131.3 80 82.5
EL10Ac6g15495 Beta vulgaris HOM05D007446 ORTHO05D009376 3.6e-29 131.3 80 81.2
Cc07_g11000 Coffea canephora HOM05D007446 ORTHO05D009376 3.6e-29 131.3 80 80.0
Lj4g0002006 Lotus japonicus HOM05D007446 ORTHO05D009376 3.6e-29 131.3 80 81.2
Lalb_Chr05g0229761 Lupinus albus HOM05D007446 ORTHO05D009376 3.6e-29 131.3 80 82.5
TWI73G1016 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 3.6e-29 131.3 80 81.2
Manes.02G106000 Manihot esculenta HOM05D007446 ORTHO05D009376 8.0e-29 130.2 80 81.2
Potri.005G111900 Populus trichocarpa HOM05D007446 ORTHO05D009376 8.0e-29 130.2 80 83.8
CSS0009543 Camellia sinensis var. sinensis HOM05D007446 ORTHO05D009376 1.4e-28 129.4 80 83.8
QL06p051006 Quercus lobata HOM05D007446 ORTHO05D009376 1.8e-28 129.0 75 85.3
Eucgr.J02461 Eucalyptus grandis HOM05D007446 ORTHO05D009376 2.3e-28 128.6 80 78.8
PGR119G1403 Punica granatum HOM05D007446 ORTHO05D009376 2.3e-28 128.6 80 78.8
Sabra05G0091700 Salix brachista HOM05D007446 ORTHO05D009376 2.3e-28 128.6 80 82.5
SalBow3G1068 Salvia bowleyana HOM05D007446 ORTHO05D009376 2.3e-28 128.6 80 78.8
Ciclev10026855m.g Citrus clementina HOM05D007446 ORTHO05D009376 4.0e-28 127.9 80 77.5
Duzib264G0432 Durio zibethinus HOM05D007446 ORTHO05D009376 4.0e-28 127.9 82 80.5
CAN.G1817.7 Capsicum annuum HOM05D007446 ORTHO05D009376 1.2e-27 126.3 80 77.5
Gohir.D11G181100 Gossypium hirsutum HOM05D007446 ORTHO05D009376 1.2e-27 126.3 75 86.7
Gorai.007G193000 Gossypium raimondii HOM05D007446 ORTHO05D009376 1.2e-27 126.3 75 86.7
Thecc.01G015400 Theobroma cacao HOM05D007446 ORTHO05D009376 1.2e-27 126.3 80 80.0
AT4G35980 Arabidopsis thaliana HOM05D007446 ORTHO05D009376 1.5e-27 125.9 80 78.8
AUR62003348 Chenopodium quinoa HOM05D007446 ORTHO05D009376 3.3e-27 124.8 80 78.8
AL7G15070 Arabidopsis lyrata HOM05D007446 ORTHO05D009376 4.4e-27 124.4 81 80.2
Carub.0007s0425 Capsella rubella HOM05D007446 ORTHO05D009376 4.4e-27 124.4 81 80.2
CAN.G1274.24 Capsicum annuum HOM05D007446 ORTHO05D009376 5.7e-27 124.0 80 76.2
ECA232G4023 Erigeron canadensis HOM05D007446 ORTHO05D009376 5.7e-27 124.0 80 76.2
AUR62029488 Chenopodium quinoa HOM05D007446 ORTHO05D009376 9.7e-27 123.2 80 77.5
AUR62043833 Chenopodium quinoa HOM05D007446 ORTHO05D009376 9.7e-27 123.2 80 77.5
Hund14058 Selenicereus undatus HOM05D007446 ORTHO05D009376 9.7e-27 123.2 80 72.5
Peaxi162Scf00328g00716 Petunia axillaris HOM05D007446 ORTHO05D009376 1.3e-26 122.9 80 77.5
HanXRQChr09g0256761 Helianthus annuus HOM05D007446 ORTHO05D009376 1.7e-26 122.5 80 73.8
Sp7g33750 Schrenkiella parvula HOM05D007446 ORTHO05D009376 1.7e-26 122.5 81 77.8
BcaNung00774 Brassica carinata HOM05D007446 ORTHO05D009376 2.2e-26 122.1 81 77.8
A01p02730 Brassica napus HOM05D007446 ORTHO05D009376 2.8e-26 121.7 81 77.8
BolC1t00289H Brassica oleracea HOM05D007446 ORTHO05D009376 2.8e-26 121.7 81 77.8
Aa31LG6G12930 Aethionema arabicum HOM05D007446 ORTHO05D009376 3.7e-26 121.3 81 77.8
C01p03030 Brassica napus HOM05D007446 ORTHO05D009376 3.7e-26 121.3 81 77.8
BraA01t00259Z Brassica rapa HOM05D007446 ORTHO05D009376 4.8e-26 120.9 81 77.8
Solyc02g083650.3 Solanum lycopersicum HOM05D007446 ORTHO05D009376 4.8e-26 120.9 80 76.2
Sopen02g028430 Solanum pennellii HOM05D007446 ORTHO05D009376 4.8e-26 120.9 80 76.2
PGSC0003DMG400003579 Solanum tuberosum HOM05D007446 ORTHO05D009376 6.3e-26 120.6 80 76.2
THA.LOC104804270 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 6.3e-26 120.6 81 77.8
Thhalv10026680m.g Eutrema salsugineum HOM05D007446 ORTHO05D009376 8.3e-26 120.2 81 77.8
CANSAT25G1207 Cannabis sativa HOM05D007446 ORTHO05D009376 1.1e-25 119.8 84 75.0
SGA_v2.0_scaffold74G24537 Striga asiatica HOM05D007446 ORTHO05D009376 1.4e-25 119.4 79 77.2
MELO3C007921.2 Cucumis melo HOM05D007446 ORTHO05D009376 2.4e-25 118.6 65 87.7
Migut.H02175 Erythranthe guttata HOM05D007446 ORTHO05D009376 3.1e-25 118.2 82 76.8
Glyma.16G124800 Glycine max HOM05D007446 ORTHO05D009376 1.2e-24 116.3 77 74.0
Ah.03g149050 Amaranthus hybridus HOM05D007446 ORTHO05D009376 2.7e-24 115.2 80 72.5
MD15G1243200 Malus domestica HOM05D007446 ORTHO05D009376 4.5e-24 114.4 65 86.2
Lsat_1_v5_gn_4_145721 Lactuca sativa HOM05D007446 ORTHO05D009376 5.9e-24 114.0 81 74.1
Psat4g101880 Pisum sativum HOM05D007446 ORTHO05D009376 7.7e-24 113.6 81 65.4
Nn7g37082 Nelumbo nucifera HOM05D007446 ORTHO05D009376 2.9e-23 111.7 78 73.1
Sed0007439 Sechium edule HOM05D007446 ORTHO05D009376 2.9e-23 111.7 65 83.1
TPR.G19502 Trifolium pratense HOM05D007446 ORTHO05D009376 6.5e-23 110.5 82 68.3
Psat4g101720 Pisum sativum HOM05D007446 ORTHO05D009376 8.5e-23 110.2 81 64.2
Phvul.003G264800 Phaseolus vulgaris HOM05D007446 ORTHO05D009376 1.1e-22 109.8 80 66.2
Medtr8g075290 Medicago truncatula HOM05D007446 ORTHO05D009376 5.5e-22 107.5 83 65.1
Nitab4.5_0001658g0040 Nicotiana tabacum HOM05D007446 ORTHO05D009376 7.2e-22 107.1 65 80.0
THA.LOC109115992 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 2.7e-21 105.1 80 70.0
TAR636G2489 Trochodendron aralioides HOM05D007446 ORTHO05D009376 4.7e-21 104.4 78 66.7
DCAR_023140 Daucus carota HOM05D000372 ORTHO05D004502 6.1e-21 104.0 82 68.3
TPR.G25793 Trifolium pratense HOM05D000002 ORTHO05D000001 8.0e-21 103.6 79 67.1
Nitab4.5_0001892g0060 Nicotiana tabacum HOM05D007446 ORTHO05D009376 1.0e-20 103.2 65 76.9
Oeu007438.1 Olea europaea HOM05D007446 ORTHO05D009376 1.4e-20 102.8 60 83.3
Gorai.007G317400 Gossypium raimondii HOM05D007446 ORTHO05D009376 4.0e-20 101.3 74 77.0
Gohir.D11G294266 Gossypium hirsutum HOM05D007446 ORTHO05D009376 6.8e-20 100.5 76 75.0
Sc07g0001100 Simmondsia chinensis HOM05D007446 ORTHO05D009376 6.8e-20 100.5 67 71.6
Gohir.A11G174000 Gossypium hirsutum HOM05D007446 ORTHO05D009376 1.5e-19 99.4 62 82.3
unitig_899.g14718 Utricularia gibba HOM05D007446 ORTHO05D009376 1.5e-19 99.4 78 69.2
Oeu054756.1 Olea europaea HOM05D007446 ORTHO05D009376 2.0e-19 99.0 60 80.0
Sc07g0001150 Simmondsia chinensis HOM05D007446 ORTHO05D009376 2.6e-19 98.6 67 71.6
DCAR_011601 Daucus carota HOM05D007446 ORTHO05D009376 1.3e-18 96.3 80 66.2
ATR0681G038 Amborella trichopoda HOM05D007446 ORTHO05D009376 1.1e-17 93.2 83 57.8
Os05g0352800 Oryza sativa ssp. japonica HOM05D007446 ORTHO05D009376 9.1e-17 90.1 72 63.9
PGSC0003DMG400022557 Solanum tuberosum HOM05D007446 ORTHO05D009376 2.9e-15 85.1 60 73.3
HPP92_012021 Vanilla planifolia HOM05D007446 ORTHO05D009376 5.0e-15 84.3 78 55.1
Psat0s2733g0120 Pisum sativum HOM05D007446 ORTHO05D009376 8.6e-15 83.6 85 52.9
Glyma.02G046300 Glycine max HOM05D007446 ORTHO05D009376 3.0e-12 75.1 49 71.4
Pp3c23_18910 Physcomitrium patens HOM05D007446 ORTHO05D009376 1.5e-11 72.8 80 48.8
Mapoly0007s0006 Marchantia polymorpha HOM05D007446 ORTHO05D009376 9.8e-11 70.1 84 47.6
SalBow3G4512 Salvia bowleyana HOM05D007446 ORTHO05D009376 2.2e-10 68.9 48 66.7
Zm00001eb428230 Zea mays HOM05D007446 ORTHO05D009376 1.1e-09 66.6 57 61.4
Actinidia22956 Actinidia chinensis HOM05D007446 ORTHO05D009376 5.4e-09 64.3 41 80.5
TAR369G0162 Trochodendron aralioides HOM05D002795 ORTHO05D000638 6.6e-07 57.4 38 71.1
AagrBONN_evm.TU.Sc2ySwM_228.3577 Anthoceros agrestis HOM05D007446 ORTHO05D009376 1.1e-06 56.6 77 41.6


User provided reference genes

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