Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G2627 Fragaria x ananassa HOM05D006615 ORTHO05D007999 1.6e-110 402.9 227 100.0
FAN28G0965 Fragaria x ananassa HOM05D006615 ORTHO05D007999 8.1e-110 400.6 227 99.6
FAN23G1998 Fragaria x ananassa HOM05D006615 ORTHO05D007999 1.1e-109 400.2 227 99.1
FvH4_1g16240 Fragaria vesca HOM05D006615 ORTHO05D007999 5.2e-109 397.9 227 99.1
FAN19G1431 Fragaria x ananassa HOM05D006615 ORTHO05D007999 2.2e-107 392.5 227 98.2
RcHm_v2.0_Chr2g0105951 Rosa chinensis HOM05D006615 ORTHO05D007999 4.9e-107 391.3 227 95.6
MD02G1174700 Malus domestica HOM05D006615 ORTHO05D007999 7.1e-98 360.9 225 88.9
MD15G1285700 Malus domestica HOM05D006615 ORTHO05D007999 1.6e-97 359.8 227 86.3
Prupe.7G131100 Prunus persica HOM05D006615 ORTHO05D007999 2.1e-97 359.4 227 88.1
Haze_15377 Corylus avellana HOM05D006615 ORTHO05D007999 3.8e-91 338.6 228 82.9
COL.COLO4_11446 Corchorus olitorius HOM05D006615 ORTHO05D007999 1.2e-89 333.6 231 79.2
Duzib147G0216 Durio zibethinus HOM05D006615 ORTHO05D007999 1.2e-89 333.6 228 81.6
Gohir.A12G072600 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.6e-89 333.2 229 79.9
QL06p040870 Quercus lobata HOM05D006615 ORTHO05D007999 7.8e-89 330.9 226 82.7
Gohir.D12G070500 Gossypium hirsutum HOM05D006615 ORTHO05D007999 3.0e-88 328.9 229 74.7
Gorai.008G077500 Gossypium raimondii HOM05D006615 ORTHO05D007999 3.0e-88 328.9 229 74.7
Ciclev10026421m.g Citrus clementina HOM05D006615 ORTHO05D007999 5.1e-88 328.2 226 79.6
Atru.chr3.300 Acer truncatum HOM05D006615 ORTHO05D007999 8.7e-88 327.4 225 82.2
Gohir.A02G156700 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.1e-87 327.0 227 79.7
Nn5g30349 Nelumbo nucifera HOM05D006615 ORTHO05D007999 4.3e-87 325.1 225 80.0
Gorai.003G025500 Gossypium raimondii HOM05D006615 ORTHO05D007999 5.6e-87 324.7 227 79.3
Actinidia12040 Actinidia chinensis HOM05D006615 ORTHO05D007999 1.6e-86 323.2 224 71.9
GSVIVG01022099001 Vitis vinifera HOM05D006615 ORTHO05D007999 3.6e-86 322.0 225 72.0
Gohir.D03G024000 Gossypium hirsutum HOM05D006615 ORTHO05D007999 4.8e-86 321.6 227 78.9
TAR625G0931 Trochodendron aralioides HOM05D006615 ORTHO05D007999 1.1e-85 320.5 225 78.7
CSS0020579 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 6.9e-85 317.8 225 75.6
TAR381G0796 Trochodendron aralioides HOM05D006615 ORTHO05D007999 2.0e-84 316.2 225 78.2
vmacro05309 Vaccinium macrocarpon HOM05D006615 ORTHO05D007999 7.6e-84 314.3 225 76.0
Cpa.g.sc55.125 Carica papaya HOM05D006615 ORTHO05D007999 1.3e-83 313.5 228 70.2
Thecc.01G059100 Theobroma cacao HOM05D006615 ORTHO05D007999 1.3e-83 313.5 211 82.0
Rhsim10G0115300 Rhododendron simsii HOM05D006615 ORTHO05D007999 1.1e-82 310.5 225 76.4
ClCG02G012310 Citrullus lanatus HOM05D006615 ORTHO05D007999 1.9e-82 309.7 227 78.0
Manes.12G104500 Manihot esculenta HOM05D006615 ORTHO05D007999 1.9e-82 309.7 226 78.3
CsaV3_2G016460 Cucumis sativus L. HOM05D006615 ORTHO05D007999 2.4e-82 309.3 214 79.4
Ah.03g145470 Amaranthus hybridus HOM05D006615 ORTHO05D007999 4.2e-82 308.5 213 70.4
CiPaw.01G016200 Carya illinoinensis HOM05D006615 ORTHO05D007999 4.2e-82 308.5 210 71.4
Aqoxy5G01194 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 7.1e-82 307.8 215 70.2
Sabra07G0040600 Salix brachista HOM05D006615 ORTHO05D007999 1.6e-81 306.6 223 70.0
MELO3C020856.2 Cucumis melo HOM05D006615 ORTHO05D007999 1.0e-80 303.9 236 74.6
Sabra05G0110900 Salix brachista HOM05D006615 ORTHO05D007999 1.8e-80 303.1 223 76.2
Cfa004036 Carpinus fangiana HOM05D006615 ORTHO05D007999 2.3e-80 302.8 208 81.7
Potri.005G140000 Populus trichocarpa HOM05D006615 ORTHO05D007999 3.0e-80 302.4 223 76.2
CDE02G1946 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 3.3e-79 298.9 215 75.8
AUR62001910 Chenopodium quinoa HOM05D006615 ORTHO05D007999 3.3e-79 298.9 217 67.3
CAN.G370.40 Capsicum annuum HOM05D006615 ORTHO05D007999 4.3e-79 298.5 212 79.2
HanXRQChr09g0263661 Helianthus annuus HOM05D006615 ORTHO05D007999 7.4e-79 297.7 224 74.1
Lsat_1_v5_gn_4_164980 Lactuca sativa HOM05D006615 ORTHO05D007999 7.4e-79 297.7 226 73.9
Sed0009491 Sechium edule HOM05D006615 ORTHO05D007999 7.4e-79 297.7 214 74.3
Thhalv10004869m.g Eutrema salsugineum HOM05D006615 ORTHO05D007999 1.6e-78 296.6 217 75.1
PSO170G0414 Papaver somniferum HOM05D006615 ORTHO05D007999 2.1e-78 296.2 218 67.0
AUR62003898 Chenopodium quinoa HOM05D006615 ORTHO05D007999 2.8e-78 295.8 217 66.4
Cc07_g06140 Coffea canephora HOM05D006615 ORTHO05D007999 3.7e-78 295.4 227 73.6
CDE04G2757 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 4.8e-78 295.0 215 74.4
Sopen02g037800 Solanum pennellii HOM05D006615 ORTHO05D007999 4.8e-78 295.0 212 77.4
Solyc02g093220.3 Solanum lycopersicum HOM05D006615 ORTHO05D007999 8.1e-78 294.3 212 76.9
PGSC0003DMG400004030 Solanum tuberosum HOM05D006615 ORTHO05D007999 8.1e-78 294.3 212 76.9
THA.LOC104821250 Tarenaya hassleriana HOM05D006615 ORTHO05D007999 8.1e-78 294.3 217 77.4
BraA07t29407Z Brassica rapa HOM05D006615 ORTHO05D007999 1.1e-77 293.9 226 72.6
Sc03g0001700 Simmondsia chinensis HOM05D006615 ORTHO05D007999 1.4e-77 293.5 212 66.0
AL8G44220 Arabidopsis lyrata HOM05D006615 ORTHO05D007999 1.8e-77 293.1 217 75.6
Peaxi162Scf00549g00014 Petunia axillaris HOM05D006615 ORTHO05D007999 1.8e-77 293.1 215 76.3
PSO210G0040 Papaver somniferum HOM05D006615 ORTHO05D007999 2.4e-77 292.7 217 66.4
C07p24600 Brassica napus HOM05D006615 ORTHO05D007999 3.1e-77 292.4 226 72.6
BolC7t42980H Brassica oleracea HOM05D006615 ORTHO05D007999 3.1e-77 292.4 226 72.6
CSS0005072 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 3.1e-77 292.4 225 64.4
Sp2g29550 Schrenkiella parvula HOM05D006615 ORTHO05D007999 3.1e-77 292.4 217 75.6
BcaB02g09933 Brassica carinata HOM05D006615 ORTHO05D007999 4.0e-77 292.0 217 75.1
A07p16820 Brassica napus HOM05D006615 ORTHO05D007999 4.0e-77 292.0 226 72.1
Glyma.11G054300 Glycine max HOM05D006615 ORTHO05D007999 1.2e-76 290.4 210 79.0
Medtr5g016890 Medicago truncatula HOM05D006615 ORTHO05D007999 1.5e-76 290.0 210 77.6
MSTRG.2870 Avicennia marina HOM05D006615 ORTHO05D007999 2.0e-76 289.7 214 71.0
Nitab4.5_0002694g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 2.0e-76 289.7 215 76.3
Migut.H00418 Erythranthe guttata HOM05D006615 ORTHO05D007999 2.6e-76 289.3 211 77.3
Hund16348 Selenicereus undatus HOM05D006615 ORTHO05D007999 3.4e-76 288.9 271 55.7
arahy.Tifrunner.gnm1.ann1.XJ9ES7 Arachis hypogaea HOM05D006615 ORTHO05D007999 4.5e-76 288.5 209 79.4
TPR.G26907 Trifolium pratense HOM05D006615 ORTHO05D007999 4.5e-76 288.5 210 70.0
Carub.0008s2737 Capsella rubella HOM05D006615 ORTHO05D007999 5.8e-76 288.1 217 74.2
DCAR_010880 Daucus carota HOM05D006615 ORTHO05D007999 5.8e-76 288.1 226 71.2
TWI09G1033 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 5.8e-76 288.1 221 65.2
Hma1.2p1_0670F.1_g200450 Hydrangea macrophylla HOM05D006615 ORTHO05D007999 7.6e-76 287.7 226 64.2
Lalb_Chr16g0378591 Lupinus albus HOM05D006615 ORTHO05D007999 7.6e-76 287.7 210 77.6
AT5G67140 Arabidopsis thaliana HOM05D006615 ORTHO05D007999 1.0e-75 287.3 217 74.7
CARHR280510 Cardamine hirsuta HOM05D006615 ORTHO05D007999 1.0e-75 287.3 217 74.2
Psat2g167840 Pisum sativum HOM05D006615 ORTHO05D007999 1.0e-75 287.3 210 70.0
arahy.Tifrunner.gnm1.ann1.8K3JW9 Arachis hypogaea HOM05D006615 ORTHO05D007999 1.3e-75 287.0 209 78.9
Atru.chr3.288 Acer truncatum HOM05D006615 ORTHO05D007999 1.7e-75 286.6 202 80.7
Phvul.002G017400 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 1.7e-75 286.6 210 77.1
MELO3C020857.2 Cucumis melo HOM05D006615 ORTHO05D007999 2.2e-75 286.2 214 75.2
Aa31LG1G15650 Aethionema arabicum HOM05D006615 ORTHO05D007999 3.8e-75 285.4 217 73.7
Oeu014828.1 Olea europaea HOM05D006615 ORTHO05D007999 3.8e-75 285.4 214 72.9
HPP92_026439 Vanilla planifolia HOM05D006615 ORTHO05D007999 3.8e-75 285.4 214 74.8
Nitab4.5_0002765g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 6.5e-75 284.6 215 75.8
Dinv26838 Davidia involucrata HOM05D000573 ORTHO05D000425 8.4e-75 284.3 164 81.7
Glyma.01G187800 Glycine max HOM05D006615 ORTHO05D007999 2.5e-74 282.7 201 80.1
ECA232G2507 Erigeron canadensis HOM05D002761 ORTHO05D003351 1.6e-73 280.0 166 78.3
ATR0800G077 Amborella trichopoda HOM05D006615 ORTHO05D007999 2.1e-73 279.6 219 74.9
Lj2g0018871 Lotus japonicus HOM05D006615 ORTHO05D007999 2.1e-73 279.6 205 77.1
VMungo1215G1750 Vigna mungo HOM05D006615 ORTHO05D007999 2.7e-73 279.3 210 77.6
Oeu049899.1 Olea europaea HOM05D006615 ORTHO05D007999 3.5e-73 278.9 209 74.2
Lj4C151G8 Lonicera japonica HOM05D006615 ORTHO05D007999 7.9e-73 277.7 207 72.9
CsaV3_2G016470 Cucumis sativus L. HOM05D006615 ORTHO05D007999 1.8e-72 276.6 214 72.4
Eucgr.H01687 Eucalyptus grandis HOM05D006615 ORTHO05D007999 1.1e-71 273.9 209 64.1
Lalb_Chr05g0213321 Lupinus albus HOM05D006615 ORTHO05D007999 2.0e-68 263.1 210 61.0
Oeu017456.1 Olea europaea HOM05D006615 ORTHO05D007999 1.4e-66 256.9 214 68.7
SEGI_10636 Sequoiadendron giganteum HOM05D006615 ORTHO05D007999 3.9e-64 248.8 222 60.4
CANSAT01G0297 Cannabis sativa HOM05D006615 ORTHO05D007999 6.7e-64 248.1 218 61.0
Actinidia36482 Actinidia chinensis HOM05D006615 ORTHO05D007999 9.7e-63 244.2 215 61.9
Os06g0166000 Oryza sativa ssp. japonica HOM05D006615 ORTHO05D007999 2.2e-62 243.0 222 55.9
Zm00001eb375600 Zea mays HOM05D006615 ORTHO05D007999 7.7e-60 234.6 216 55.1
SGA_v2.0_scaffold15G07326 Striga asiatica HOM05D006615 ORTHO05D007999 6.3e-54 214.9 214 64.5
Aqoxy6G01271 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 2.1e-49 199.9 227 59.9
unitig_748.g8604 Utricularia gibba HOM05D002191 ORTHO05D007999 1.8e-48 196.8 164 58.5
Pp3c7_15700 Physcomitrium patens HOM05D006615 ORTHO05D007999 2.6e-47 193.0 204 55.9
Mapoly0005s0095 Marchantia polymorpha HOM05D006615 ORTHO05D007999 5.3e-45 185.3 166 51.8
AagrBONN_evm.TU.Sc2ySwM_344.5234 Anthoceros agrestis HOM05D006615 ORTHO05D007999 1.5e-42 177.2 214 50.9
TWI73G1298 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 3.2e-42 176.0 138 62.3
Potri.007G045601 Populus trichocarpa HOM05D006615 ORTHO05D007999 9.4e-34 147.9 96 75.0
SMO164G0246 Selaginella moellendorffii HOM05D006615 ORTHO05D007999 9.4e-34 147.9 202 50.0
MSTRG.3434 Avicennia marina HOM05D006615 ORTHO05D007999 1.8e-21 107.1 103 74.8
ClCG02G012330 Citrullus lanatus HOM05D006615 ORTHO05D007999 1.6e-20 104.0 81 61.7
Phvul.008G146300 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 3.0e-11 73.2 43 72.1
RcHm_v2.0_Chr3g0487451 Rosa chinensis HOM05D032618 ORTHO05D007999 2.8e-09 66.6 54 61.1
Aqoxy4G02446 Aquilegia oxysepala HOM05D001818 ORTHO05D001780 5.2e-08 62.4 71 36.6
EL10Ac6g15726 Beta vulgaris HOM05D006615 ORTHO05D007999 5.2e-08 62.4 155 28.4
RcHm_v2.0_Chr5g0029101 Rosa chinensis HOM05D032618 ORTHO05D007999 1.2e-07 61.2 53 58.5
Nn1g09548 Nelumbo nucifera HOM05D005998 ORTHO05D007664 1.3e-06 57.8 157 32.5
FvH4_1g14800 Fragaria vesca HOM05D000710 ORTHO05D000336 6.4e-06 55.5 167 29.9


User provided reference genes

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