Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G2605 Fragaria x ananassa HOM05D007232 ORTHO05D000652 4.4e-77 291.2 146 100.0
FAN19G3039 Fragaria x ananassa HOM05D007232 ORTHO05D000652 1.1e-72 276.6 147 95.9
FvH4_1g21180 Fragaria vesca HOM05D007232 ORTHO05D000652 1.5e-72 276.2 147 95.9
FAN23G0488 Fragaria x ananassa HOM05D007232 ORTHO05D000652 1.2e-69 266.5 140 96.4
FAN28G0479 Fragaria x ananassa HOM05D007232 ORTHO05D000652 2.6e-69 265.4 140 96.4
RcHm_v2.0_Chr2g0115011 Rosa chinensis HOM05D000973 ORTHO05D000652 2.5e-48 195.7 142 70.4
MD01G1027300 Malus domestica HOM05D007232 ORTHO05D000652 1.9e-19 99.8 143 42.0
Prupe.6G182500 Prunus persica HOM05D007232 ORTHO05D000652 1.9e-19 99.8 143 43.4
MD15G1326600 Malus domestica HOM05D007232 ORTHO05D000652 1.4e-17 93.6 143 39.9
Ciclev10027435m.g Citrus clementina HOM05D007232 ORTHO05D000652 1.7e-15 86.7 140 37.1
Sabra07G0074600 Salix brachista HOM05D007232 ORTHO05D000652 2.4e-14 82.8 149 38.3
Rhsim10G0159300 Rhododendron simsii HOM05D007232 ORTHO05D000652 5.3e-14 81.6 129 42.6
Cfa002682 Carpinus fangiana HOM05D000973 ORTHO05D000652 2.6e-13 79.3 143 37.8
Glyma.05G179200 Glycine max HOM05D000973 ORTHO05D000652 4.5e-13 78.6 132 34.1
CSS0050475 Camellia sinensis var. sinensis HOM05D007232 ORTHO05D000652 7.7e-13 77.8 143 40.6
QL06p049910 Quercus lobata HOM05D000973 ORTHO05D000652 1.3e-12 77.0 135 37.8
Potri.005G077100 Populus trichocarpa HOM05D007232 ORTHO05D000652 2.2e-12 76.3 151 35.1
PSO781G0167 Papaver somniferum HOM05D000973 ORTHO05D000652 2.9e-12 75.9 128 31.2
Prupe.1G513900 Prunus persica HOM05D000973 ORTHO05D000652 2.9e-12 75.9 133 37.6
PGR044G0913 Punica granatum HOM05D007232 ORTHO05D000652 5.0e-12 75.1 138 39.9
Aqoxy4G02373 Aquilegia oxysepala HOM05D000973 ORTHO05D000652 6.5e-12 74.7 126 34.9
Ca_17729_v3 Cicer arietinum L. HOM05D000973 ORTHO05D000652 8.5e-12 74.3 133 37.6
Glyma.08G136900 Glycine max HOM05D000973 ORTHO05D000652 8.5e-12 74.3 133 33.1
CiPaw.04G098100 Carya illinoinensis HOM05D000973 ORTHO05D000652 2.5e-11 72.8 134 35.8
MD15G1366200 Malus domestica HOM05D007232 ORTHO05D000652 7.2e-11 71.2 131 32.8
TPR.G2188 Trifolium pratense HOM05D007232 ORTHO05D000652 7.2e-11 71.2 146 34.9
TWI36G0485 Tripterygium wilfordii HOM05D000973 ORTHO05D000652 2.1e-10 69.7 122 36.9
Thecc.01G104000 Theobroma cacao HOM05D007232 ORTHO05D000652 2.7e-10 69.3 132 34.8
Duzib147G1351 Durio zibethinus HOM05D007232 ORTHO05D000652 3.6e-10 68.9 148 34.5
QL12p036377 Quercus lobata HOM05D007232 ORTHO05D000652 4.7e-10 68.6 126 36.5
Potri.005G166600 Populus trichocarpa HOM05D000973 ORTHO05D000652 8.0e-10 67.8 134 35.8
Haze_24953 Corylus avellana HOM05D000973 ORTHO05D000652 1.0e-09 67.4 128 36.7
Gohir.D12G096300 Gossypium hirsutum HOM05D007232 ORTHO05D000652 1.0e-09 67.4 130 33.8
Gorai.008G104500 Gossypium raimondii HOM05D007232 ORTHO05D000652 1.0e-09 67.4 130 33.8
Lj4g0021275 Lotus japonicus HOM05D007232 ORTHO05D000652 1.0e-09 67.4 141 33.3
TAR628G1220 Trochodendron aralioides HOM05D000973 ORTHO05D000652 1.0e-09 67.4 133 34.6
Duzib264G0914 Durio zibethinus HOM05D007232 ORTHO05D000652 1.8e-09 66.6 130 34.6
Manes.18G068700 Manihot esculenta HOM05D000973 ORTHO05D000652 1.8e-09 66.6 136 30.9
Oeu056593.1 Olea europaea HOM05D007232 ORTHO05D000652 1.8e-09 66.6 139 32.4
Nn1g05316 Nelumbo nucifera HOM05D000973 ORTHO05D000652 3.0e-09 65.9 135 32.6
Nn1g05317 Nelumbo nucifera HOM05D000973 ORTHO05D000652 3.0e-09 65.9 135 32.6
Actinidia36596 Actinidia chinensis HOM05D007232 ORTHO05D000652 5.2e-09 65.1 114 40.4
Eucgr.F02438 Eucalyptus grandis HOM05D000973 ORTHO05D000652 5.2e-09 65.1 146 29.5
Hma1.2p1_0308F.1_g120090 Hydrangea macrophylla HOM05D007232 ORTHO05D000652 5.2e-09 65.1 135 31.1
Lalb_Chr08g0241951 Lupinus albus HOM05D000973 ORTHO05D000652 5.2e-09 65.1 126 32.5
FAN04G1532 Fragaria x ananassa HOM05D000973 ORTHO05D000652 1.2e-08 63.9 127 33.1
Lalb_Chr11g0065501 Lupinus albus HOM05D000973 ORTHO05D000652 1.2e-08 63.9 125 30.4
Lalb_Chr23g0270631 Lupinus albus HOM05D000973 ORTHO05D000652 1.2e-08 63.9 126 33.3
COL.COLO4_09942 Corchorus olitorius HOM05D007232 ORTHO05D000652 2.6e-08 62.8 133 34.6
PSO541G5618 Papaver somniferum HOM05D000973 ORTHO05D000652 3.3e-08 62.4 109 31.2
FvH4_5g37770 Fragaria vesca HOM05D000973 ORTHO05D000652 4.4e-08 62.0 127 33.1
FAN08G1947 Fragaria x ananassa HOM05D000973 ORTHO05D000652 4.4e-08 62.0 127 33.1
FAN13G2686 Fragaria x ananassa HOM05D000973 ORTHO05D000652 4.4e-08 62.0 127 33.1
FAN18G1204 Fragaria x ananassa HOM05D000973 ORTHO05D000652 4.4e-08 62.0 127 33.1
Ca_15240_v3 Cicer arietinum L. HOM05D000973 ORTHO05D000652 5.7e-08 61.6 126 31.0
Psat7g055040 Pisum sativum HOM05D007232 ORTHO05D000652 7.5e-08 61.2 132 34.8
RcHm_v2.0_Chr7g0239521 Rosa chinensis HOM05D000973 ORTHO05D000652 9.7e-08 60.8 130 33.8
Lsat_1_v5_gn_9_43820 Lactuca sativa HOM05D007232 ORTHO05D000652 1.3e-07 60.5 126 32.5
Psat5g137520 Pisum sativum HOM05D000973 ORTHO05D000652 1.3e-07 60.5 126 30.2
Gohir.A12G090900 Gossypium hirsutum HOM05D007232 ORTHO05D000652 2.2e-07 59.7 130 30.8
Hma1.2p1_0237F.1_g099320 Hydrangea macrophylla HOM05D000973 ORTHO05D000652 2.2e-07 59.7 130 31.5
Hma1.2p1_1783F.1_g302128 Hydrangea macrophylla HOM05D000973 ORTHO05D000652 2.2e-07 59.7 130 31.5
VMungo0251G1798 Vigna mungo HOM05D007232 ORTHO05D000652 2.2e-07 59.7 128 32.8
Lalb_Chr11g0075311 Lupinus albus HOM05D007232 ORTHO05D000652 2.8e-07 59.3 130 31.5
Glyma.06G104900 Glycine max HOM05D000973 ORTHO05D000652 1.1e-06 57.4 128 32.0
Actinidia37187 Actinidia chinensis HOM05D000973 ORTHO05D000652 3.1e-06 55.8 130 30.8
Glyma.04G103700 Glycine max HOM05D000973 ORTHO05D000652 3.1e-06 55.8 126 28.6
MD08G1180500 Malus domestica HOM05D007232 ORTHO05D000652 3.1e-06 55.8 99 34.3
PSO447G0191 Papaver somniferum HOM05D000973 ORTHO05D000652 3.1e-06 55.8 128 30.5
ATR0564G206 Amborella trichopoda HOM05D000973 ORTHO05D000652 4.1e-06 55.5 129 29.5
Phvul.002G255000 Phaseolus vulgaris HOM05D000973 ORTHO05D000652 4.1e-06 55.5 124 32.3
TWI56G1376 Tripterygium wilfordii HOM05D000973 ORTHO05D000652 4.1e-06 55.5 126 31.0
Cpa.g.sc36.113 Carica papaya HOM05D000973 ORTHO05D000652 5.3e-06 55.1 145 32.4
Medtr8g090320 Medicago truncatula HOM05D007232 ORTHO05D000652 5.3e-06 55.1 133 31.6
CANSAT01G0360 Cannabis sativa HOM05D007232 ORTHO05D000652 9.1e-06 54.3 127 31.5


User provided reference genes

Program Settings