Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G2604 Fragaria x ananassa HOM05D000682 ORTHO05D000510 7.4e-77 290.4 142 100.0
FvH4_6g17410 Fragaria vesca HOM05D000682 ORTHO05D000510 2.3e-17 92.8 133 42.1
FAN02G3118 Fragaria x ananassa HOM05D000682 ORTHO05D000510 2.3e-17 92.8 133 42.1
FAN05G4196 Fragaria x ananassa HOM05D000682 ORTHO05D000510 2.3e-17 92.8 133 42.1
FAN05G5338 Fragaria x ananassa HOM05D000682 ORTHO05D000510 2.3e-17 92.8 133 42.1
FAN09G1349 Fragaria x ananassa HOM05D000682 ORTHO05D000510 2.3e-17 92.8 133 42.1
FAN09G2058 Fragaria x ananassa HOM05D000682 ORTHO05D000510 2.3e-17 92.8 133 42.1
RcHm_v2.0_Chr3g0471661 Rosa chinensis HOM05D000682 ORTHO05D000510 4.2e-16 88.6 133 39.8
Prupe.7G121400 Prunus persica HOM05D000682 ORTHO05D000510 5.5e-16 88.2 133 39.1
FAN14G4167 Fragaria x ananassa HOM05D000682 ORTHO05D000510 1.2e-15 87.0 191 33.5
FAN23G1913 Fragaria x ananassa HOM05D000682 ORTHO05D000510 3.6e-15 85.5 49 83.7
Manes.08G018100 Manihot esculenta HOM05D000682 ORTHO05D000510 3.6e-15 85.5 133 36.8
MD12G1100900 Malus domestica HOM05D000682 ORTHO05D000510 8.0e-15 84.3 133 36.8
Cpa.g.sc5.109 Carica papaya HOM05D000682 ORTHO05D000510 1.4e-14 83.6 135 37.0
THA.LOC104805133 Tarenaya hassleriana HOM05D000682 ORTHO05D000510 2.3e-14 82.8 133 35.3
FAN23G2786 Fragaria x ananassa HOM05D000682 ORTHO05D000510 4.0e-14 82.0 46 84.8
QL07p041072 Quercus lobata HOM05D000682 ORTHO05D000510 4.0e-14 82.0 133 37.6
arahy.Tifrunner.gnm1.ann1.1HLM41 Arachis hypogaea HOM05D000682 ORTHO05D000510 5.2e-14 81.6 133 36.1
arahy.Tifrunner.gnm1.ann1.Q4JBZ8 Arachis hypogaea HOM05D000682 ORTHO05D000510 5.2e-14 81.6 133 36.1
TWI74G0165 Tripterygium wilfordii HOM05D000682 ORTHO05D000510 6.8e-14 81.3 133 36.8
Manes.09G057800 Manihot esculenta HOM05D000682 ORTHO05D000510 8.9e-14 80.9 133 36.8
THA.LOC104827497 Tarenaya hassleriana HOM05D000682 ORTHO05D000510 8.9e-14 80.9 133 35.3
CiPaw.10G003100 Carya illinoinensis HOM05D000682 ORTHO05D000510 1.2e-13 80.5 133 36.8
COL.COLO4_22278 Corchorus olitorius HOM05D000682 ORTHO05D000510 1.2e-13 80.5 133 36.1
TWI77G0509 Tripterygium wilfordii HOM05D000682 ORTHO05D000510 1.5e-13 80.1 133 36.1
Thecc.05G077800 Theobroma cacao HOM05D000682 ORTHO05D000510 2.0e-13 79.7 133 35.3
ClCG04G009650 Citrullus lanatus HOM05D000682 ORTHO05D000510 2.6e-13 79.3 133 36.1
Dinv35849 Davidia involucrata HOM05D000682 ORTHO05D000510 2.6e-13 79.3 135 37.0
MELO3C024504.2 Cucumis melo HOM05D000682 ORTHO05D000510 4.4e-13 78.6 133 35.3
Sed0014735 Sechium edule HOM05D000682 ORTHO05D000510 5.7e-13 78.2 133 36.1
Duzib128G1939 Durio zibethinus HOM05D000682 ORTHO05D000510 9.8e-13 77.4 133 34.6
Gohir.A01G140200 Gossypium hirsutum HOM05D000682 ORTHO05D000510 1.3e-12 77.0 133 33.8
Gorai.002G160300 Gossypium raimondii HOM05D000682 ORTHO05D000510 1.3e-12 77.0 133 33.8
Lj5g0020352 Lotus japonicus HOM05D000682 ORTHO05D000510 1.3e-12 77.0 133 34.6
Potri.006G117900 Populus trichocarpa HOM05D000682 ORTHO05D000510 1.3e-12 77.0 133 33.8
CsaV3_6G040290 Cucumis sativus L. HOM05D000682 ORTHO05D000510 1.7e-12 76.6 133 34.6
CiPaw.09G006500 Carya illinoinensis HOM05D000682 ORTHO05D000510 2.2e-12 76.3 133 35.3
Duzib093G1683 Durio zibethinus HOM05D000682 ORTHO05D000510 2.2e-12 76.3 119 39.5
VMungo1383G3728 Vigna mungo HOM05D000682 ORTHO05D000510 2.2e-12 76.3 123 36.6
Cfa016505 Carpinus fangiana HOM05D000682 ORTHO05D000510 4.9e-12 75.1 133 35.3
Lalb_Chr01g0018461 Lupinus albus HOM05D000682 ORTHO05D000510 4.9e-12 75.1 134 33.6
Haze_19507 Corylus avellana HOM05D000682 ORTHO05D000510 6.3e-12 74.7 133 35.3
Actinidia11316 Actinidia chinensis HOM05D000682 ORTHO05D000510 8.3e-12 74.3 130 34.6
MD14G1095100 Malus domestica HOM05D000682 ORTHO05D000510 8.3e-12 74.3 95 44.2
Medtr7g103300 Medicago truncatula HOM05D000682 ORTHO05D000510 8.3e-12 74.3 95 46.3
Psat3g037400 Pisum sativum HOM05D000682 ORTHO05D000510 8.3e-12 74.3 95 47.4
Glyma.19G189500 Glycine max HOM05D000682 ORTHO05D000510 1.1e-11 73.9 133 34.6
TPR.G31494 Trifolium pratense HOM05D000682 ORTHO05D000510 1.4e-11 73.6 95 46.3
Gohir.D01G129500 Gossypium hirsutum HOM05D000682 ORTHO05D000510 1.8e-11 73.2 95 43.2
PGR004G2406 Punica granatum HOM05D000682 ORTHO05D000510 1.8e-11 73.2 148 31.8
Ca_08950_v3 Cicer arietinum L. HOM05D000682 ORTHO05D000510 2.4e-11 72.8 95 46.3
Sabra06G0092800 Salix brachista HOM05D000682 ORTHO05D000510 2.4e-11 72.8 133 33.1
Atru.chr8.1693 Acer truncatum HOM05D000682 ORTHO05D000510 3.1e-11 72.4 49 63.3
TAR633G0393 Trochodendron aralioides HOM05D000682 ORTHO05D000510 3.1e-11 72.4 133 34.6
GSVIVG01033741001 Vitis vinifera HOM05D000682 ORTHO05D000510 3.1e-11 72.4 123 35.0
VMungo0720G0041 Vigna mungo HOM05D000682 ORTHO05D000510 4.1e-11 72.0 133 33.1
Dinv37374 Davidia involucrata HOM05D000682 ORTHO05D000510 7.0e-11 71.2 119 36.1
Glyma.10G064500 Glycine max HOM05D000682 ORTHO05D000510 9.2e-11 70.9 133 33.1
Lalb_Chr02g0155301 Lupinus albus HOM05D000682 ORTHO05D000510 9.2e-11 70.9 119 39.5
CANSAT80G2913 Cannabis sativa HOM05D000682 ORTHO05D000510 1.2e-10 70.5 95 42.1
Phvul.007G225100 Phaseolus vulgaris HOM05D000682 ORTHO05D000510 1.2e-10 70.5 133 32.3
Aa31LG5G21830 Aethionema arabicum HOM05D000682 ORTHO05D000510 1.6e-10 70.1 133 33.1
Glyma.13G149100 Glycine max HOM05D000682 ORTHO05D000510 1.6e-10 70.1 133 33.1
Gohir.A04G067400 Gossypium hirsutum HOM05D000682 ORTHO05D000510 2.0e-10 69.7 123 34.1
Hma1.2p1_0084F.1_g042960 Hydrangea macrophylla HOM05D000682 ORTHO05D000510 2.0e-10 69.7 129 32.6
Gohir.D04G106100 Gossypium hirsutum HOM05D000682 ORTHO05D000510 2.7e-10 69.3 123 35.0
Nn2g13946 Nelumbo nucifera HOM05D000682 ORTHO05D000510 2.7e-10 69.3 133 33.8
Oeu040558.1 Olea europaea HOM05D000682 ORTHO05D000510 3.5e-10 68.9 129 34.9
Gorai.009G410000 Gossypium raimondii HOM05D000682 ORTHO05D000510 5.9e-10 68.2 123 34.1
PGR142G2694 Punica granatum HOM05D000682 ORTHO05D000510 5.9e-10 68.2 134 32.8
Lj3A1007T27 Lonicera japonica HOM05D000682 ORTHO05D000510 7.8e-10 67.8 129 32.6
Peaxi162Scf00500g00714 Petunia axillaris HOM05D000682 ORTHO05D000510 7.8e-10 67.8 148 32.4
Solyc09g008780.4 Solanum lycopersicum HOM05D000682 ORTHO05D000510 7.8e-10 67.8 129 34.1
Sopen09g003570 Solanum pennellii HOM05D000682 ORTHO05D000510 7.8e-10 67.8 129 34.1
Ca_11605_v3 Cicer arietinum L. HOM05D000682 ORTHO05D000510 1.0e-09 67.4 133 31.6
Ca_12339_v3 Cicer arietinum L. HOM05D000682 ORTHO05D000510 1.0e-09 67.4 133 31.6
Eucgr.A01580 Eucalyptus grandis HOM05D000682 ORTHO05D000510 1.0e-09 67.4 133 30.8
Thhalv10016620m.g Eutrema salsugineum HOM05D000682 ORTHO05D000510 1.0e-09 67.4 133 32.3
Lj3A1006G33 Lonicera japonica HOM05D000682 ORTHO05D000510 1.0e-09 67.4 125 32.8
vmacro07345 Vaccinium macrocarpon HOM05D000682 ORTHO05D000510 1.3e-09 67.0 129 31.8
AL4G32810 Arabidopsis lyrata HOM05D000682 ORTHO05D000510 1.7e-09 66.6 133 31.6
A05p09240 Brassica napus HOM05D000682 ORTHO05D000510 1.7e-09 66.6 133 31.6
BraA05t19880Z Brassica rapa HOM05D000682 ORTHO05D000510 1.7e-09 66.6 133 31.6
HanXRQChr11g0350921 Helianthus annuus HOM05D000682 ORTHO05D000510 1.7e-09 66.6 119 35.3
Rhsim03G0084700 Rhododendron simsii HOM05D000682 ORTHO05D000510 1.7e-09 66.6 119 33.6
BcaB01g03821 Brassica carinata HOM05D000682 ORTHO05D000510 2.3e-09 66.2 133 31.6
ECA248G2733 Erigeron canadensis HOM05D000682 ORTHO05D000510 2.3e-09 66.2 119 35.3
Lsat_1_v5_gn_1_50821 Lactuca sativa HOM05D000682 ORTHO05D000510 2.3e-09 66.2 119 35.3
Sp4g18910 Schrenkiella parvula HOM05D000682 ORTHO05D000510 2.3e-09 66.2 123 32.5
MSTRG.19214 Avicennia marina HOM05D000682 ORTHO05D000510 2.9e-09 65.9 129 32.6
BcaB02g09344 Brassica carinata HOM05D000682 ORTHO05D000510 2.9e-09 65.9 133 30.8
BcaC02g11776 Brassica carinata HOM05D000682 ORTHO05D000510 2.9e-09 65.9 133 30.8
C04p11510 Brassica napus HOM05D000682 ORTHO05D000510 2.9e-09 65.9 133 30.8
BolC4t22801H Brassica oleracea HOM05D000682 ORTHO05D000510 2.9e-09 65.9 133 30.8
CARHR130910 Cardamine hirsuta HOM05D000682 ORTHO05D000510 3.8e-09 65.5 133 30.1
HanXRQChr13g0400061 Helianthus annuus HOM05D000682 ORTHO05D000510 3.8e-09 65.5 110 40.0
PGSC0003DMG400002730 Solanum tuberosum HOM05D000682 ORTHO05D000510 3.8e-09 65.5 119 36.1
SalBow3G2182 Salvia bowleyana HOM05D000682 ORTHO05D000510 5.0e-09 65.1 129 33.3
SGA_v2.0_scaffold40G15440 Striga asiatica HOM05D000682 ORTHO05D000510 5.0e-09 65.1 112 36.6
Aqoxy1G01003 Aquilegia oxysepala HOM05D000682 ORTHO05D000510 6.6e-09 64.7 127 32.3
AT2G36630 Arabidopsis thaliana HOM05D000682 ORTHO05D000510 6.6e-09 64.7 124 31.5
Carub.0004s1845 Capsella rubella HOM05D000682 ORTHO05D000510 6.6e-09 64.7 133 30.8
Lsat_1_v5_gn_6_29021 Lactuca sativa HOM05D000682 ORTHO05D000510 6.6e-09 64.7 91 42.9
HanXRQChr01g0028131 Helianthus annuus HOM05D000682 ORTHO05D000510 8.6e-09 64.3 119 33.6
Nitab4.5_0000680g0090 Nicotiana tabacum HOM05D000682 ORTHO05D000510 8.6e-09 64.3 127 33.9
Oeu030470.1 Olea europaea HOM05D000682 ORTHO05D000510 8.6e-09 64.3 138 32.6
Aqoxy2G01517 Aquilegia oxysepala HOM05D000682 ORTHO05D000510 1.1e-08 63.9 123 33.3
CDE02G3033 Ceratophyllum demersum HOM05D000682 ORTHO05D000510 1.1e-08 63.9 134 36.6
DCAR_015023 Daucus carota HOM05D000682 ORTHO05D000510 1.1e-08 63.9 89 43.8
SalBow3G0324 Salvia bowleyana HOM05D000682 ORTHO05D000510 1.1e-08 63.9 119 35.3
CAN.G824.53 Capsicum annuum HOM05D000682 ORTHO05D000510 1.5e-08 63.5 142 33.1
Lj2A126T24 Lonicera japonica HOM05D000682 ORTHO05D000510 1.5e-08 63.5 133 31.6
Lj1g0026687 Lotus japonicus HOM05D000682 ORTHO05D000510 1.5e-08 63.5 97 44.3
Hund20422 Selenicereus undatus HOM05D000682 ORTHO05D000510 1.5e-08 63.5 138 31.9
Psat6g077480 Pisum sativum HOM05D000682 ORTHO05D000510 3.3e-08 62.4 133 30.8
Migut.L01739 Erythranthe guttata HOM05D000682 ORTHO05D000510 4.3e-08 62.0 129 31.8
Sc20g0005890 Simmondsia chinensis HOM05D000682 ORTHO05D000510 4.3e-08 62.0 123 33.3
DCAR_020789 Daucus carota HOM05D000682 ORTHO05D000510 5.6e-08 61.6 144 31.9
SEGI_33938 Sequoiadendron giganteum HOM05D000682 ORTHO05D000510 5.6e-08 61.6 129 28.7
TPR.G5648 Trifolium pratense HOM05D000682 ORTHO05D000510 5.6e-08 61.6 133 29.3
EL10Ac7g16755 Beta vulgaris HOM05D000682 ORTHO05D000510 7.3e-08 61.2 123 31.7
AUR62037911 Chenopodium quinoa HOM05D000682 ORTHO05D000510 7.3e-08 61.2 161 33.5
AUR62040164 Chenopodium quinoa HOM05D000682 ORTHO05D000510 7.3e-08 61.2 161 33.5
Cc06_g04970 Coffea canephora HOM05D000682 ORTHO05D000510 7.3e-08 61.2 129 30.2
Hund04086 Selenicereus undatus HOM05D000682 ORTHO05D000510 7.3e-08 61.2 138 32.6
Nn6g35108 Nelumbo nucifera HOM05D000682 ORTHO05D000510 9.5e-08 60.8 99 35.4
Nitab4.5_0006314g0030 Nicotiana tabacum HOM05D000682 ORTHO05D000510 9.5e-08 60.8 91 41.8
Os03g0726500 Oryza sativa ssp. japonica HOM05D000682 ORTHO05D000510 9.5e-08 60.8 123 30.9
Ciclev10011694m.g Citrus clementina HOM05D000682 ORTHO05D000510 1.2e-07 60.5 133 31.6
Migut.J00490 Erythranthe guttata HOM05D000682 ORTHO05D000510 1.2e-07 60.5 122 32.8
PSO339G0002 Papaver somniferum HOM05D000682 ORTHO05D000510 1.2e-07 60.5 119 36.1
PSO339G4666 Papaver somniferum HOM05D000682 ORTHO05D000510 1.2e-07 60.5 115 35.7
Peaxi162Scf00110g00104 Petunia axillaris HOM05D000682 ORTHO05D000510 1.6e-07 60.1 115 37.4
PSO063G3199 Papaver somniferum HOM05D000682 ORTHO05D000510 2.1e-07 59.7 119 36.1
PSO801G0164 Papaver somniferum HOM05D000682 ORTHO05D000510 2.1e-07 59.7 115 35.7
ECA233G1485 Erigeron canadensis HOM05D000682 ORTHO05D000510 2.8e-07 59.3 115 37.4
Ah.08g211110 Amaranthus hybridus HOM05D000682 ORTHO05D000510 4.7e-07 58.5 134 34.3
ATR0665G469 Amborella trichopoda HOM05D000682 ORTHO05D000510 4.7e-07 58.5 97 36.1
Nitab4.5_0000132g0350 Nicotiana tabacum HOM05D000682 ORTHO05D000510 4.7e-07 58.5 45 57.8
Zm00001eb055880 Zea mays HOM05D000682 ORTHO05D000510 6.1e-07 58.2 121 33.9
Nitab4.5_0009405g0040 Nicotiana tabacum HOM05D000682 ORTHO05D000510 1.8e-06 56.6 91 39.6


User provided reference genes

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