Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G2532 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.4e-86 323.2 200 100.0
FvH4_1g20190 Fragaria vesca HOM05D004728 ORTHO05D002375 1.4e-78 296.6 201 87.6
FAN19G1373 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.4e-78 296.6 201 87.6
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 3.1e-65 252.3 200 77.0
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 4.0e-36 155.6 144 72.9
MD15G1317800 Malus domestica HOM05D004728 ORTHO05D002375 5.8e-19 98.6 200 47.0
Dinv13237 Davidia involucrata HOM05D004728 ORTHO05D002375 4.1e-17 92.4 194 43.3
Prupe.6G194000 Prunus persica HOM05D004728 ORTHO05D002375 1.0e-15 87.8 169 47.3
Oeu002157.4 Olea europaea HOM05D004728 ORTHO05D002375 3.3e-14 82.8 141 51.1
MSTRG.3754 Avicennia marina HOM05D004728 ORTHO05D002375 5.6e-14 82.0 148 41.2
TAR376G0441 Trochodendron aralioides HOM05D004728 ORTHO05D002375 1.2e-13 80.9 116 54.3
TAR376G0070 Trochodendron aralioides HOM05D015253 ORTHO05D002375 2.8e-13 79.7 117 38.5
Migut.L00163 Erythranthe guttata HOM05D004728 ORTHO05D002375 3.6e-13 79.3 123 38.2
Migut.H02321 Erythranthe guttata HOM05D004728 ORTHO05D002375 6.2e-13 78.6 153 46.4
GSVIVG01003435001 Vitis vinifera HOM05D004728 ORTHO05D002375 1.1e-12 77.8 113 38.1
SGA_v2.0_scaffold115G32157 Striga asiatica HOM05D004728 ORTHO05D002375 2.6e-11 73.2 160 40.6
SalBow3G1954 Salvia bowleyana HOM05D004728 ORTHO05D002375 4.4e-11 72.4 106 49.1
Peaxi162Scf00044g01721 Petunia axillaris HOM05D019315 ORTHO05D002375 4.9e-10 68.9 126 50.0
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 1.1e-09 67.8 131 42.0
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.1e-09 67.8 104 50.0
Nitab4.5_0002996g0010 Nicotiana tabacum HOM05D019315 ORTHO05D002375 1.4e-09 67.4 124 43.5
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 2.4e-09 66.6 148 41.2
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 3.2e-09 66.2 149 36.2
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 5.4e-09 65.5 104 49.0
Oeu049688.1 Olea europaea HOM05D004728 ORTHO05D002375 5.4e-09 65.5 78 57.7
HanXRQChr05g0149651 Helianthus annuus HOM05D004728 ORTHO05D002375 1.2e-08 64.3 93 46.2
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 1.2e-08 64.3 105 28.6
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.1e-08 63.5 158 36.7
Solyc05g051450.2 Solanum lycopersicum HOM05D019315 ORTHO05D002375 3.5e-08 62.8 139 41.0
ECA247G3235 Erigeron canadensis HOM05D004728 ORTHO05D002375 4.6e-08 62.4 113 38.1
Dinv13238 Davidia involucrata HOM05D004728 ORTHO05D002375 6.0e-08 62.0 111 39.6
Lj2A538G23 Lonicera japonica HOM05D004728 ORTHO05D002375 6.0e-08 62.0 108 34.3
Sopen05g029860 Solanum pennellii HOM05D000436 ORTHO05D001944 6.0e-08 62.0 95 49.5
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 7.8e-08 61.6 134 39.6
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.7e-07 60.5 97 43.3
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 1.7e-07 60.5 99 46.5
DCAR_003461 Daucus carota HOM05D004728 ORTHO05D002375 3.0e-07 59.7 88 40.9
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 3.0e-07 59.7 111 45.0
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.0e-07 59.7 97 42.3
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 3.9e-07 59.3 98 42.9
Cc07_g14530 Coffea canephora HOM05D004728 ORTHO05D002375 3.9e-07 59.3 115 40.9
Prupe.6G194100 Prunus persica HOM05D004728 ORTHO05D002375 3.9e-07 59.3 103 49.5
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 3.9e-07 59.3 103 47.6
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 3.9e-07 59.3 97 45.4
Sc01g0000880 Simmondsia chinensis HOM05D004728 ORTHO05D002375 6.6e-07 58.5 90 53.3
Eucgr.I02631 Eucalyptus grandis HOM05D007310 ORTHO05D002375 8.7e-07 58.2 173 32.9
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 8.7e-07 58.2 158 36.7
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 8.7e-07 58.2 91 49.5
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 1.1e-06 57.8 106 38.7
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 1.1e-06 57.8 98 40.8
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 1.9e-06 57.0 147 36.1
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 3.3e-06 56.2 91 49.5
QL02p002263 Quercus lobata HOM05D004728 ORTHO05D002375 3.3e-06 56.2 89 50.6
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 3.3e-06 56.2 91 47.3
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 4.3e-06 55.8 88 50.0
Lsat_1_v5_gn_1_2940 Lactuca sativa HOM05D004728 ORTHO05D002375 5.6e-06 55.5 94 41.5
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 7.3e-06 55.1 123 43.1
Actinidia29600 Actinidia chinensis HOM05D004728 ORTHO05D002375 9.6e-06 54.7 143 38.5
Haze_10565 Corylus avellana HOM05D007310 ORTHO05D002375 9.6e-06 54.7 117 37.6
PSO675G6306 Papaver somniferum HOM05D004728 ORTHO05D002375 9.6e-06 54.7 200 33.5


User provided reference genes

Program Settings