Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G2527 Fragaria x ananassa HOM05D007057 ORTHO05D008878 1.3e-82 310.5 262 100.0
FAN28G1564 Fragaria x ananassa HOM05D007057 ORTHO05D008878 1.3e-47 194.1 202 98.0
FAN27G3162 Fragaria x ananassa HOM05D007057 ORTHO05D008878 1.8e-44 183.7 195 99.0
FAN02G0321 Fragaria x ananassa HOM05D007057 ORTHO05D008878 1.9e-33 147.1 76 97.4
FAN05G1805 Fragaria x ananassa HOM05D007057 ORTHO05D008878 5.4e-33 145.6 76 96.1
FvH4_6g00680 Fragaria vesca HOM05D007057 ORTHO05D008878 1.2e-32 144.4 76 94.7
FAN14G3263 Fragaria x ananassa HOM05D007057 ORTHO05D008878 1.2e-32 144.4 76 94.7
FAN09G2991 Fragaria x ananassa HOM05D007057 ORTHO05D008878 3.5e-32 142.9 76 93.4
RcHm_v2.0_Chr3g0448121 Rosa chinensis HOM05D007057 ORTHO05D008878 8.1e-29 131.7 76 88.2
Prupe.6G359800 Prunus persica HOM05D007057 ORTHO05D008878 1.1e-22 111.3 76 68.4
QL01p045590 Quercus lobata HOM05D007057 ORTHO05D008878 7.8e-16 88.6 76 57.9
Cfa006273 Carpinus fangiana HOM05D007057 ORTHO05D008878 1.1e-14 84.7 76 56.6
CiPaw.07G078900 Carya illinoinensis HOM05D007057 ORTHO05D008878 1.1e-14 84.7 76 56.6
Haze_04538 Corylus avellana HOM05D007057 ORTHO05D008878 9.6e-14 81.6 76 53.9
Potri.013G087200 Populus trichocarpa HOM05D007057 ORTHO05D008878 1.3e-13 81.3 76 50.0
CANSAT54G2802 Cannabis sativa HOM05D007057 ORTHO05D008878 4.8e-13 79.3 77 53.2
TAR362G1011 Trochodendron aralioides HOM05D007057 ORTHO05D008878 6.2e-13 79.0 76 53.9
Manes.08G104600 Manihot esculenta HOM05D007057 ORTHO05D008878 1.8e-12 77.4 77 53.2
CSS0018282 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 4.0e-12 76.3 76 51.3
CSS0040898 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 4.0e-12 76.3 76 51.3
CSS0040779 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 6.9e-12 75.5 76 50.0
Dinv04346 Davidia involucrata HOM05D007057 ORTHO05D008878 6.9e-12 75.5 77 49.4
CSS0046667 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 9.0e-12 75.1 76 50.0
TWI18G1405 Tripterygium wilfordii HOM05D007057 ORTHO05D008878 9.0e-12 75.1 77 46.8
TWI75G1373 Tripterygium wilfordii HOM05D007057 ORTHO05D008878 1.5e-11 74.3 77 48.1
Duzib177G0705 Durio zibethinus HOM05D007057 ORTHO05D008878 4.4e-11 72.8 76 47.4
GSVIVG01019130001 Vitis vinifera HOM05D007057 ORTHO05D008878 4.4e-11 72.8 77 49.4
vmacro06001 Vaccinium macrocarpon HOM05D007057 ORTHO05D008878 9.9e-11 71.6 77 50.6
Duzib128G1528 Durio zibethinus HOM05D007057 ORTHO05D008878 1.7e-10 70.9 76 46.1
Cpa.g.sc123.6 Carica papaya HOM05D007057 ORTHO05D008878 2.2e-10 70.5 77 50.6
Eucgr.H01380 Eucalyptus grandis HOM05D007057 ORTHO05D008878 2.2e-10 70.5 77 49.4
Migut.L01029 Erythranthe guttata HOM05D007057 ORTHO05D008878 2.9e-10 70.1 185 74.6
ClCG03G010890 Citrullus lanatus HOM05D007057 ORTHO05D008878 8.4e-10 68.6 74 48.6
COL.COLO4_27405 Corchorus olitorius HOM05D007057 ORTHO05D008878 8.4e-10 68.6 76 44.7
MELO3C010073.2 Cucumis melo HOM05D007057 ORTHO05D008878 2.4e-09 67.0 74 47.3
CsaV3_1G044640 Cucumis sativus L. HOM05D007057 ORTHO05D008878 2.4e-09 67.0 74 47.3
Sed0005007 Sechium edule HOM05D007057 ORTHO05D008878 2.4e-09 67.0 74 47.3
Actinidia34764 Actinidia chinensis HOM05D007057 ORTHO05D008878 3.2e-09 66.6 77 48.1
Gohir.A05G390700 Gossypium hirsutum HOM05D007057 ORTHO05D008878 4.2e-09 66.2 76 48.7
DCAR_001923 Daucus carota HOM05D007057 ORTHO05D008878 5.4e-09 65.9 76 48.7
Glyma.09G251800 Glycine max HOM05D007057 ORTHO05D008878 5.4e-09 65.9 74 51.4
Rhsim03G0265600 Rhododendron simsii HOM05D007057 ORTHO05D008878 5.4e-09 65.9 77 46.8
Glyma.18G240800 Glycine max HOM05D007057 ORTHO05D008878 7.1e-09 65.5 74 51.4
Psat3g104800 Pisum sativum HOM05D007057 ORTHO05D008878 9.3e-09 65.1 74 50.0
Thecc.05G201600 Theobroma cacao HOM05D007057 ORTHO05D008878 9.3e-09 65.1 74 44.6
Gohir.D04G026500 Gossypium hirsutum HOM05D007057 ORTHO05D008878 2.7e-08 63.5 76 46.1
Ciclev10013603m.g Citrus clementina HOM05D007057 ORTHO05D008878 3.5e-08 63.2 77 45.5
AUR62006672 Chenopodium quinoa HOM05D007057 ORTHO05D008878 6.0e-08 62.4 77 46.8
Cc09_g03450 Coffea canephora HOM05D007057 ORTHO05D008878 6.0e-08 62.4 77 44.2
Lalb_Chr19g0126731 Lupinus albus HOM05D007057 ORTHO05D008878 7.8e-08 62.0 74 48.6
AUR62000330 Chenopodium quinoa HOM05D007057 ORTHO05D008878 1.0e-07 61.6 77 46.8
Ca_07967_v3 Cicer arietinum L. HOM05D007057 ORTHO05D008878 1.0e-07 61.6 74 48.6
Lalb_Chr03g0038391 Lupinus albus HOM05D007057 ORTHO05D008878 1.0e-07 61.6 74 50.0
PGSC0003DMG400010523 Solanum tuberosum HOM05D007057 ORTHO05D008878 1.0e-07 61.6 77 44.2
Sopen04g025560 Solanum pennellii HOM05D007057 ORTHO05D008878 1.3e-07 61.2 77 44.2
MSTRG.8219 Avicennia marina HOM05D007057 ORTHO05D008878 2.3e-07 60.5 77 41.6
AUR62000327 Chenopodium quinoa HOM05D007057 ORTHO05D008878 2.3e-07 60.5 193 71.5
Gorai.012G029100 Gossypium raimondii HOM05D007057 ORTHO05D008878 2.3e-07 60.5 71 46.5
Solyc04g056640.1 Solanum lycopersicum HOM05D007057 ORTHO05D008878 3.0e-07 60.1 77 44.2
Ah.04g158850 Amaranthus hybridus HOM05D007057 ORTHO05D008878 5.1e-07 59.3 77 42.9
Aqoxy2G03299 Aquilegia oxysepala HOM05D007057 ORTHO05D008878 5.1e-07 59.3 77 42.9
Peaxi162Scf00976g00023 Petunia axillaris HOM05D007057 ORTHO05D008878 5.1e-07 59.3 77 42.9
PGR031G0541 Punica granatum HOM05D007057 ORTHO05D008878 5.1e-07 59.3 77 44.2
Nn4g26683 Nelumbo nucifera HOM05D007057 ORTHO05D008878 8.7e-07 58.5 76 47.4
Peaxi162Scf00006g00421 Petunia axillaris HOM05D007057 ORTHO05D008878 8.7e-07 58.5 77 42.9
VMungo1383G0494 Vigna mungo HOM05D007057 ORTHO05D008878 8.7e-07 58.5 74 47.3
SGA_v2.0_scaffold71G23872 Striga asiatica HOM05D007057 ORTHO05D008878 1.1e-06 58.2 76 44.7
CAN.G217.2 Capsicum annuum HOM05D007057 ORTHO05D008878 1.5e-06 57.8 80 40.0
Lj1g0009704 Lotus japonicus HOM05D007057 ORTHO05D008878 1.5e-06 57.8 74 47.3
Nitab4.5_0000946g0060 Nicotiana tabacum HOM05D007057 ORTHO05D008878 3.3e-06 56.6 77 42.9
Medtr7g079550 Medicago truncatula HOM05D007057 ORTHO05D008878 4.3e-06 56.2 75 48.0
EL10Ac4g09982 Beta vulgaris HOM05D007057 ORTHO05D008878 5.6e-06 55.8 77 40.3
PSO675G4505 Papaver somniferum HOM05D007057 ORTHO05D008878 5.6e-06 55.8 76 40.8
PSO017G0140 Papaver somniferum HOM05D007057 ORTHO05D008878 7.3e-06 55.5 76 40.8
Atru.chr10.1100 Acer truncatum HOM05D007057 ORTHO05D008878 9.6e-06 55.1 76 43.4
Sc16g0010320 Simmondsia chinensis HOM05D007057 ORTHO05D008878 9.6e-06 55.1 78 35.9


User provided reference genes

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