Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 6.0e-302 1040.0 522 100.0
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 5.7e-292 1006.9 522 97.5
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 2.0e-289 998.4 524 96.9
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.9e-287 991.9 524 96.8
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 6.3e-283 976.9 522 93.9
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.8e-266 922.2 523 91.2
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 8.6e-240 833.6 547 79.5
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 3.7e-227 791.6 547 77.3
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 3.0e-224 781.9 546 75.8
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 6.2e-198 694.5 547 69.7
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 1.8e-197 693.0 543 68.7
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 1.1e-194 683.7 549 68.7
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 5.4e-194 681.4 560 66.2
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 3.5e-193 678.7 564 65.8
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 6.0e-193 677.9 567 65.6
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 4.8e-190 668.3 549 67.2
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 6.2e-190 667.9 549 66.7
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 1.5e-188 663.3 549 66.3
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 7.6e-188 661.0 549 65.8
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 4.2e-186 655.2 577 61.9
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 1.3e-184 650.2 555 64.5
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 3.0e-184 649.0 564 63.8
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 1.4e-181 640.2 565 64.4
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 4.0e-181 638.6 547 64.0
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 1.3e-179 633.6 496 68.3
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 1.7e-179 633.3 499 68.7
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 6.5e-179 631.3 496 68.1
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 1.9e-178 629.8 546 65.6
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 2.1e-177 626.3 509 68.0
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 1.3e-176 623.6 553 63.8
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 3.9e-176 622.1 503 69.2
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 1.1e-175 620.5 524 64.9
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 1.9e-175 619.8 487 68.6
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 5.7e-175 618.2 491 68.6
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 1.3e-174 617.1 574 60.8
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 5.3e-173 611.7 497 68.2
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 9.0e-173 610.9 494 67.8
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 2.0e-172 609.8 537 63.1
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 1.4e-170 603.6 530 63.0
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 4.2e-170 602.1 531 62.9
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 5.5e-170 601.7 493 66.5
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 9.4e-170 600.9 533 64.2
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 4.6e-169 598.6 501 64.9
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 4.6e-169 598.6 503 65.2
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 1.8e-168 596.7 551 60.8
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 2.3e-168 596.3 483 66.5
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 3.6e-161 572.4 553 59.7
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 1.1e-159 567.4 551 59.5
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 3.3e-159 565.8 489 64.4
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 2.8e-158 562.8 545 59.6
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 1.2e-156 557.4 529 59.7
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 5.0e-155 552.0 558 57.5
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 1.1e-154 550.8 542 59.0
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 4.2e-154 548.9 546 58.2
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 7.2e-154 548.1 475 63.4
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 2.7e-153 546.2 574 56.8
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 2.7e-153 546.2 574 56.8
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 1.7e-150 537.0 514 61.1
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 4.8e-150 535.4 494 60.3
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 6.3e-150 535.0 472 63.1
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 1.8e-149 533.5 506 60.1
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 4.5e-148 528.9 622 52.7
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 5.9e-148 528.5 516 59.1
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 6.5e-147 525.0 496 59.5
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 1.6e-145 520.4 548 56.9
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 2.7e-145 519.6 504 59.5
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 5.7e-143 511.9 485 59.4
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 1.0e-139 501.1 548 55.5
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 5.0e-139 498.8 492 57.5
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.2e-137 494.2 556 53.1
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 1.4e-136 490.7 525 56.2
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 7.0e-133 478.4 498 56.2
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 2.0e-132 476.9 431 61.5
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 8.6e-131 471.5 500 55.4
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 1.6e-129 467.2 493 54.8
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 4.7e-129 465.7 508 54.7
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 1.4e-128 464.2 485 56.5
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 6.8e-128 461.8 384 67.2
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 3.1e-125 453.0 493 54.2
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 1.6e-124 450.7 543 50.5
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 1.1e-117 427.9 420 58.3
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 4.6e-116 422.5 439 58.1
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 6.6e-115 418.7 502 49.8
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 1.5e-114 417.5 491 50.3
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 4.3e-114 416.0 467 52.2
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 2.1e-113 413.7 465 52.5
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 3.6e-113 412.9 474 49.8
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 7.5e-111 405.2 496 52.6
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 2.9e-110 403.3 490 52.4
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 1.0e-107 394.8 493 50.5
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 1.0e-99 368.2 349 60.2
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 3.3e-98 363.2 541 43.6
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 5.6e-98 362.5 493 49.3
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 9.5e-98 361.7 509 46.6
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 4.2e-93 346.3 529 45.6
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 4.8e-89 332.8 559 39.9
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 4.4e-87 326.2 502 42.8
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 3.5e-84 316.6 596 37.4
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.7e-83 314.3 329 57.1
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 5.1e-83 312.8 518 42.3
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 5.1e-83 312.8 309 57.6
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 6.4e-78 295.8 514 40.1
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.3e-73 281.6 298 56.0
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.6e-73 281.2 224 66.1
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 2.4e-72 277.3 510 37.1
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 8.2e-65 252.3 237 60.3
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 4.6e-60 236.5 519 34.7
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 2.4e-56 224.2 364 44.8
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 4.8e-49 199.9 581 29.6
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 9.7e-42 175.6 523 29.6
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 2.2e-41 174.5 364 37.9
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 4.7e-36 156.8 153 55.6
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 2.2e-33 147.9 88 80.7
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 9.8e-26 122.5 133 51.9
Peaxi162Scf00370g00114 Petunia axillaris HOM05D006568 ORTHO05D008342 2.7e-15 87.8 108 49.1
Oeu060513.1 Olea europaea HOM05D006568 ORTHO05D008342 4.4e-10 70.5 98 39.8
Medtr8g014610 Medicago truncatula HOM05D006568 ORTHO05D258972 3.2e-08 64.3 69 56.5
SMO172G0023 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 2.0e-07 61.6 289 26.6


User provided reference genes

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