Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G2387 Fragaria x ananassa HOM05D004574 ORTHO05D005612 7.1e-170 600.5 305 100.0
FAN28G0742 Fragaria x ananassa HOM05D004574 ORTHO05D005612 2.2e-86 323.2 281 68.3
FAN19G2253 Fragaria x ananassa HOM05D004574 ORTHO05D046172 3.5e-52 209.5 129 87.6
FvH4_3g00170 Fragaria vesca HOM05D000188 ORTHO05D000362 1.1e-50 204.5 121 88.4
FAN21G2903 Fragaria x ananassa HOM05D000188 ORTHO05D000362 2.5e-50 203.4 127 85.0
FAN28G2389 Fragaria x ananassa HOM05D004574 ORTHO05D005612 1.8e-35 154.1 209 51.2
RcHm_v2.0_Chr2g0086551 Rosa chinensis HOM05D004574 ORTHO05D005612 3.0e-35 153.3 195 51.8
FvH4_1g01590 Fragaria vesca HOM05D004574 ORTHO05D005612 3.9e-35 152.9 209 50.7
FAN23G1466 Fragaria x ananassa HOM05D004574 ORTHO05D005612 5.1e-35 152.5 195 53.3
FAN19G2203 Fragaria x ananassa HOM05D004574 ORTHO05D005612 2.0e-34 150.6 209 50.2
FAN26G2227 Fragaria x ananassa HOM05D004574 ORTHO05D005612 3.1e-32 143.3 209 48.3
Prupe.7G253700 Prunus persica HOM05D004574 ORTHO05D005612 4.5e-23 112.8 208 45.7
FvH4_1g27540 Fragaria vesca HOM05D004574 ORTHO05D046172 1.3e-22 111.3 68 86.8
MD02G1012700 Malus domestica HOM05D004574 ORTHO05D005612 8.5e-22 108.6 187 45.5
MD15G1158500 Malus domestica HOM05D004574 ORTHO05D005612 1.3e-17 94.7 199 42.7
FAN19G2474 Fragaria x ananassa HOM05D004574 ORTHO05D005612 1.8e-16 90.9 92 60.9
Psat4g033240 Pisum sativum HOM05D004574 ORTHO05D005612 1.0e-11 75.1 174 37.9
CANSAT11G2415 Cannabis sativa HOM05D004574 ORTHO05D005612 2.3e-11 73.9 213 35.7
Potri.006G189501 Populus trichocarpa HOM05D004574 ORTHO05D005612 2.3e-11 73.9 162 38.9
Sabra06G0145700 Salix brachista HOM05D004574 ORTHO05D005612 3.0e-11 73.6 178 36.5
TPR.G15786 Trifolium pratense HOM05D004574 ORTHO05D005612 5.2e-11 72.8 177 37.3
Haze_19313 Corylus avellana HOM05D004574 ORTHO05D005612 1.5e-10 71.2 167 40.7
arahy.Tifrunner.gnm1.ann1.J06XH2 Arachis hypogaea HOM05D004574 ORTHO05D005612 2.0e-10 70.9 173 34.7
vmacro21880 Vaccinium macrocarpon HOM05D004574 ORTHO05D005612 2.0e-10 70.9 175 37.7
Ciclev10007567m.g Citrus clementina HOM05D004574 ORTHO05D005612 3.4e-10 70.1 216 32.9
Glyma.13G156900 Glycine max HOM05D004574 ORTHO05D005612 3.4e-10 70.1 189 34.9
Lj4g0023014 Lotus japonicus HOM05D004574 ORTHO05D005612 4.4e-10 69.7 182 38.5
A05p39200 Brassica napus HOM05D004574 ORTHO05D005612 7.5e-10 68.9 189 36.0
BcaC05g29707 Brassica carinata HOM05D004574 ORTHO05D005612 1.3e-09 68.2 198 34.3
BraA05t22709Z Brassica rapa HOM05D004574 ORTHO05D005612 2.2e-09 67.4 189 34.9
Cfa020884 Carpinus fangiana HOM05D004574 ORTHO05D005612 2.2e-09 67.4 151 36.4
Actinidia04251 Actinidia chinensis HOM05D004574 ORTHO05D005612 2.8e-09 67.0 174 37.9
Actinidia21909 Actinidia chinensis HOM05D004574 ORTHO05D005612 3.7e-09 66.6 175 36.6
CARHR084360 Cardamine hirsuta HOM05D004574 ORTHO05D005612 3.7e-09 66.6 161 38.5
Manes.14G139500 Manihot esculenta HOM05D004574 ORTHO05D005612 6.3e-09 65.9 198 34.3
Medtr4g116570 Medicago truncatula HOM05D004574 ORTHO05D005612 6.3e-09 65.9 194 34.0
TAR625G1332 Trochodendron aralioides HOM05D004574 ORTHO05D005612 6.3e-09 65.9 178 35.4
Atru.chr7.229_Atru.chr7.228 Acer truncatum HOM05D004574 ORTHO05D005612 8.3e-09 65.5 170 37.6
Sp3g08180 Schrenkiella parvula HOM05D004574 ORTHO05D005612 1.8e-08 64.3 194 32.5
QL02p091406 Quercus lobata HOM05D004574 ORTHO05D005612 3.1e-08 63.5 195 31.8
Ah.09g223910 Amaranthus hybridus HOM05D004574 ORTHO05D005612 4.1e-08 63.2 192 32.8
BcaC05g29496 Brassica carinata HOM05D004574 ORTHO05D005612 5.4e-08 62.8 200 32.0
C05p58250 Brassica napus HOM05D004574 ORTHO05D005612 5.4e-08 62.8 200 32.0
BolC5t34479H Brassica oleracea HOM05D004574 ORTHO05D005612 5.4e-08 62.8 200 32.0
Thhalv10020109m.g Eutrema salsugineum HOM05D004574 ORTHO05D005612 9.1e-08 62.0 198 33.3
Phvul.003G175300 Phaseolus vulgaris HOM05D004574 ORTHO05D005612 9.1e-08 62.0 166 34.3
VMungo1215G1939 Vigna mungo HOM05D004574 ORTHO05D005612 9.1e-08 62.0 193 34.2
Glyma.17G104500 Glycine max HOM05D004574 ORTHO05D005612 1.6e-07 61.2 183 33.9
arahy.Tifrunner.gnm1.ann1.YXSX85 Arachis hypogaea HOM05D004574 ORTHO05D005612 2.0e-07 60.8 190 32.6
Oeu040778.1 Olea europaea HOM05D004574 ORTHO05D005612 2.0e-07 60.8 188 29.3
Duzib168G1873 Durio zibethinus HOM05D004574 ORTHO05D005612 3.5e-07 60.1 159 36.5
Sabra18G0096500 Salix brachista HOM05D004574 ORTHO05D005612 3.5e-07 60.1 164 34.1
THA.LOC104815398 Tarenaya hassleriana HOM05D004574 ORTHO05D005612 3.5e-07 60.1 153 34.6
AL3G21080 Arabidopsis lyrata HOM05D004574 ORTHO05D005612 4.5e-07 59.7 166 33.1
Hund14397 Selenicereus undatus HOM05D004574 ORTHO05D005612 4.5e-07 59.7 185 34.1
Carub.0003s0894 Capsella rubella HOM05D004574 ORTHO05D005612 5.9e-07 59.3 159 35.8
DCAR_017762 Daucus carota HOM05D004574 ORTHO05D005612 1.0e-06 58.5 193 31.1
ECA234G1322 Erigeron canadensis HOM05D004574 ORTHO05D005612 1.0e-06 58.5 204 30.4
Sc18g0000060 Simmondsia chinensis HOM05D004574 ORTHO05D005612 1.0e-06 58.5 166 34.9
Nn2g12259 Nelumbo nucifera HOM05D004574 ORTHO05D005612 1.3e-06 58.2 173 32.9
Thecc.09G142400 Theobroma cacao HOM05D004574 ORTHO05D005612 1.7e-06 57.8 159 34.0
MSTRG.19628 Avicennia marina HOM05D004574 ORTHO05D005612 2.9e-06 57.0 184 34.2
Aa31LG3G2320 Aethionema arabicum HOM05D004574 ORTHO05D005612 3.8e-06 56.6 159 32.7
CiPaw.16G117400 Carya illinoinensis HOM05D004574 ORTHO05D005612 3.8e-06 56.6 156 34.6
Gohir.A06G049000 Gossypium hirsutum HOM05D004574 ORTHO05D005612 3.8e-06 56.6 167 32.3
Sed0008757 Sechium edule HOM05D004574 ORTHO05D005612 3.8e-06 56.6 61 54.1
Gohir.D06G048700 Gossypium hirsutum HOM05D004574 ORTHO05D005612 5.0e-06 56.2 172 34.9
Gorai.010G054900 Gossypium raimondii HOM05D004574 ORTHO05D005612 5.0e-06 56.2 172 34.9
Lalb_Chr07g0179541 Lupinus albus HOM05D004574 ORTHO05D005612 5.0e-06 56.2 171 32.2
Zm00001eb028250 Zea mays HOM05D004574 ORTHO05D005612 5.0e-06 56.2 83 47.0
CSS0028433 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 6.5e-06 55.8 172 31.4
COL.COLO4_24085 Corchorus olitorius HOM05D004574 ORTHO05D005612 6.5e-06 55.8 161 34.8
Peaxi162Scf00347g00125 Petunia axillaris HOM05D004574 ORTHO05D005612 6.5e-06 55.8 184 31.0
AUR62041455 Chenopodium quinoa HOM05D004574 ORTHO05D005612 8.6e-06 55.5 200 30.5
MELO3C010260.2 Cucumis melo HOM05D004574 ORTHO05D005612 8.6e-06 55.5 188 34.0
Eucgr.L03484 Eucalyptus grandis HOM05D004574 ORTHO05D005612 8.6e-06 55.5 155 34.8
Nitab4.5_0001671g0130 Nicotiana tabacum HOM05D004574 ORTHO05D005612 8.6e-06 55.5 184 32.1
Potri.018G113600 Populus trichocarpa HOM05D004574 ORTHO05D005612 8.6e-06 55.5 192 31.2
Sed0022583 Sechium edule HOM05D004574 ORTHO05D005612 8.6e-06 55.5 176 32.4


User provided reference genes

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