Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G2375 Fragaria x ananassa HOM05D011822 ORTHO05D010083 1.2e-92 343.2 176 100.0
FvH4_1g11880 Fragaria vesca HOM05D008224 ORTHO05D010083 5.1e-35 151.8 99 87.9
FAN19G0355 Fragaria x ananassa HOM05D008224 ORTHO05D010083 5.1e-35 151.8 99 87.9
FvH4_1g29121 Fragaria vesca HOM05D011822 ORTHO05D016288 1.7e-30 136.7 79 82.3
FAN20G0089 Fragaria x ananassa HOM05D011822 ORTHO05D016288 1.0e-27 127.5 81 74.1
FAN27G1875 Fragaria x ananassa HOM05D011822 ORTHO05D016288 3.0e-27 125.9 78 76.9
FAN07G1272 Fragaria x ananassa HOM05D011822 ORTHO05D016288 8.7e-27 124.4 79 75.9
FAN17G2924 Fragaria x ananassa HOM05D011822 ORTHO05D016288 6.2e-25 118.2 79 72.2
FvH4_7g02961 Fragaria vesca HOM05D011822 ORTHO05D016288 1.1e-24 117.5 72 75.0
FAN20G0486 Fragaria x ananassa HOM05D011822 ORTHO05D016288 4.9e-22 108.6 65 76.9
FAN28G1100 Fragaria x ananassa HOM05D011822 ORTHO05D016288 2.7e-20 102.8 71 67.6
Lalb_Chr09g0321801 Lupinus albus HOM05D008224 ORTHO05D010083 3.4e-15 85.9 85 58.8
Haze_03767 Corylus avellana HOM05D008224 ORTHO05D010083 7.6e-15 84.7 64 70.3
FAN25G1091 Fragaria x ananassa HOM05D011822 ORTHO05D016288 1.3e-14 84.0 53 71.7
QL12p007153 Quercus lobata HOM05D008224 ORTHO05D010083 3.8e-14 82.4 78 64.1
Prupe.7G167900 Prunus persica HOM05D008224 ORTHO05D010083 4.9e-14 82.0 78 62.8
FvH4_3g37331 Fragaria vesca HOM05D011822 ORTHO05D045563 1.9e-13 80.1 78 53.8
Atru.chr4.381 Acer truncatum HOM05D008224 ORTHO05D010083 3.2e-13 79.3 96 49.0
Medtr5g021840 Medicago truncatula HOM05D008224 ORTHO05D010083 7.1e-13 78.2 85 55.3
Thecc.01G019300 Theobroma cacao HOM05D008224 ORTHO05D010083 7.1e-13 78.2 97 52.6
Psat2g155040 Pisum sativum HOM05D008224 ORTHO05D010083 9.3e-13 77.8 112 44.6
QL06p032684 Quercus lobata HOM05D008224 ORTHO05D010083 9.3e-13 77.8 78 62.8
Glyma.11G076300 Glycine max HOM05D008224 ORTHO05D010083 2.7e-12 76.3 65 61.5
Lj4P218T44 Lonicera japonica HOM05D008224 ORTHO05D010083 2.7e-12 76.3 104 47.1
Glyma.01G166900 Glycine max HOM05D008224 ORTHO05D010083 3.5e-12 75.9 65 61.5
Phvul.002G109500 Phaseolus vulgaris HOM05D008224 ORTHO05D010083 3.5e-12 75.9 65 61.5
Peaxi162Scf00083g00052 Petunia axillaris HOM05D008224 ORTHO05D010083 4.6e-12 75.5 67 58.2
COL.COLO4_21914 Corchorus olitorius HOM05D008224 ORTHO05D010083 1.3e-11 73.9 94 50.0
CiPaw.08G131800 Carya illinoinensis HOM05D008224 ORTHO05D010083 3.0e-11 72.8 66 63.6
Ciclev10027456m.g Citrus clementina HOM05D008224 ORTHO05D010083 3.0e-11 72.8 99 46.5
Nitab4.5_0003271g0030 Nicotiana tabacum HOM05D008224 ORTHO05D010083 3.0e-11 72.8 95 44.2
Gohir.D11G183450 Gossypium hirsutum HOM05D008224 ORTHO05D010083 8.7e-11 71.2 95 49.5
Gorai.007G195300 Gossypium raimondii HOM05D008224 ORTHO05D010083 1.1e-10 70.9 98 49.0
Nitab4.5_0006286g0060 Nicotiana tabacum HOM05D008224 ORTHO05D010083 1.1e-10 70.9 94 42.6
Potri.005G114500 Populus trichocarpa HOM05D008224 ORTHO05D010083 1.5e-10 70.5 81 51.9
Sabra05G0093700 Salix brachista HOM05D008224 ORTHO05D010083 1.5e-10 70.5 94 45.7
Gohir.A11G175668 Gossypium hirsutum HOM05D008224 ORTHO05D010083 1.9e-10 70.1 96 49.0
Nn1g05883 Nelumbo nucifera HOM05D008224 ORTHO05D010083 3.3e-10 69.3 65 58.5
Manes.02G104200 Manihot esculenta HOM05D008224 ORTHO05D010083 4.3e-10 68.9 66 59.1
Gohir.A10G098400 Gossypium hirsutum HOM05D008224 ORTHO05D010083 5.6e-10 68.6 93 45.2
Nn5g30159 Nelumbo nucifera HOM05D008224 ORTHO05D010083 5.6e-10 68.6 63 58.7
Gorai.011G098500 Gossypium raimondii HOM05D008224 ORTHO05D010083 1.3e-09 67.4 93 44.1
TAR381G1028 Trochodendron aralioides HOM05D008224 ORTHO05D010083 1.3e-09 67.4 94 46.8
CSS0002084 Camellia sinensis var. sinensis HOM05D008224 ORTHO05D010083 1.6e-09 67.0 104 45.2
Actinidia22982 Actinidia chinensis HOM05D002668 ORTHO05D003295 2.1e-09 66.6 81 46.9
FAN14G3032 Fragaria x ananassa HOM05D011822 ORTHO05D045563 2.1e-09 66.6 67 52.2
Solyc02g083930.1 Solanum lycopersicum HOM05D008224 ORTHO05D010083 2.1e-09 66.6 74 51.4
Sopen02g028710 Solanum pennellii HOM05D008224 ORTHO05D010083 2.1e-09 66.6 74 51.4
Sp2g30460 Schrenkiella parvula HOM05D014245 ORTHO05D010083 2.8e-09 66.2 66 56.1
FvH4_4g15642 Fragaria vesca HOM05D011822 ORTHO05D016288 3.7e-09 65.9 40 67.5
Gohir.D10G089800 Gossypium hirsutum HOM05D008224 ORTHO05D010083 3.7e-09 65.9 93 43.0
TPR.G18188 Trifolium pratense HOM05D008224 ORTHO05D010083 3.7e-09 65.9 60 60.0
Ca_25829_v3 Cicer arietinum L. HOM05D008224 ORTHO05D010083 4.8e-09 65.5 75 53.3
BcaB02g10776 Brassica carinata HOM05D014245 ORTHO05D010083 6.2e-09 65.1 65 55.4
Cc07_g10680 Coffea canephora HOM05D008224 ORTHO05D010083 6.2e-09 65.1 68 48.5
FAN07G1667 Fragaria x ananassa HOM05D011822 ORTHO05D016288 6.2e-09 65.1 35 80.0
PGSC0003DMG400003638 Solanum tuberosum HOM05D008224 ORTHO05D010083 8.1e-09 64.7 74 50.0
TAR625G0799 Trochodendron aralioides HOM05D008224 ORTHO05D010083 8.1e-09 64.7 65 55.4
CARHR281490 Cardamine hirsuta HOM05D014245 ORTHO05D010083 1.1e-08 64.3 64 56.2
Oeu064592.1 Olea europaea HOM05D008224 ORTHO05D010083 2.4e-08 63.2 81 49.4
Sed0025479 Sechium edule HOM05D008224 ORTHO05D010083 2.4e-08 63.2 74 54.1
Aqoxy5G01777 Aquilegia oxysepala HOM05D008224 ORTHO05D010083 6.9e-08 61.6 86 45.3
CsaV3_6G047070 Cucumis sativus L. HOM05D008224 ORTHO05D010083 6.9e-08 61.6 126 40.5
A06p26690 Brassica napus HOM05D014245 ORTHO05D010083 9.0e-08 61.2 65 53.8
Thhalv10005172m.g Eutrema salsugineum HOM05D014245 ORTHO05D010083 9.0e-08 61.2 68 51.5
Gorai.003G009900 Gossypium raimondii HOM05D008224 ORTHO05D010083 9.0e-08 61.2 62 51.6
Sc16g0002160 Simmondsia chinensis HOM05D008224 ORTHO05D010083 9.0e-08 61.2 100 40.0
Actinidia17446 Actinidia chinensis HOM05D008224 ORTHO05D010083 1.5e-07 60.5 69 49.3
AL8G45290 Arabidopsis lyrata HOM05D014245 ORTHO05D010083 1.5e-07 60.5 61 55.7
Carub.0008s2826 Capsella rubella HOM05D014245 ORTHO05D010083 1.5e-07 60.5 63 55.6
MELO3C007900.2 Cucumis melo HOM05D008224 ORTHO05D010083 2.6e-07 59.7 71 54.9
Hma1.2p1_0258F.1_g104170 Hydrangea macrophylla HOM05D008224 ORTHO05D010083 3.4e-07 59.3 66 48.5
DCAR_016610 Daucus carota HOM05D008224 ORTHO05D010083 5.8e-07 58.5 102 45.1
Rhsim10G0212800 Rhododendron simsii HOM05D008224 ORTHO05D010083 7.6e-07 58.2 111 38.7
ClCG01G020280 Citrullus lanatus HOM05D008224 ORTHO05D010083 9.9e-07 57.8 101 44.6
EL10Ac6g15476 Beta vulgaris HOM05D008224 ORTHO05D010083 1.7e-06 57.0 124 33.1
Lsat_1_v5_gn_3_74461 Lactuca sativa HOM05D008224 ORTHO05D010083 4.9e-06 55.5 127 33.9


User provided reference genes

Program Settings