Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 3.7e-57 224.6 106 100.0
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 3.7e-57 224.6 106 100.0
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 8.2e-57 223.4 106 99.1
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 8.2e-57 223.4 106 99.1
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 8.5e-54 213.4 106 93.4
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 9.1e-48 193.4 106 82.1
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 7.7e-47 190.3 106 81.1
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 2.2e-46 188.7 106 78.3
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 6.5e-46 187.2 106 77.4
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 5.5e-45 184.1 106 75.5
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 7.2e-45 183.7 106 73.6
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 4.7e-44 181.0 106 73.6
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 1.4e-43 179.5 106 72.6
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 1.8e-43 179.1 106 72.6
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 2.3e-43 178.7 106 72.6
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 2.3e-43 178.7 105 74.3
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 3.0e-43 178.3 106 72.6
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 2.0e-42 175.6 103 73.8
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 2.0e-42 175.6 104 72.1
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 7.5e-42 173.7 105 69.5
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 9.8e-42 173.3 106 71.7
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 1.3e-41 172.9 103 71.8
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 3.7e-41 171.4 106 69.8
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 8.3e-41 170.2 106 68.9
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 8.3e-41 170.2 106 71.7
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 1.8e-40 169.1 106 68.9
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 2.4e-40 168.7 105 70.5
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 5.4e-40 167.5 106 68.9
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 7.0e-40 167.2 105 70.5
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 9.2e-40 166.8 103 65.0
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 1.6e-39 166.0 103 70.9
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 2.0e-39 165.6 101 68.3
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 2.7e-39 165.2 104 69.2
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 2.7e-39 165.2 106 68.9
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 3.5e-39 164.9 96 74.0
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 4.5e-39 164.5 102 71.6
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 4.5e-39 164.5 102 71.6
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 5.9e-39 164.1 101 73.3
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 7.8e-39 163.7 102 66.7
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 7.8e-39 163.7 103 69.9
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 1.0e-38 163.3 103 68.9
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 1.0e-38 163.3 103 68.9
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 1.7e-38 162.5 101 67.3
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 1.7e-38 162.5 101 67.3
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 2.3e-38 162.2 104 66.3
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 2.9e-38 161.8 103 68.0
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 3.8e-38 161.4 104 67.3
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 6.6e-38 160.6 101 69.3
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 8.6e-38 160.2 101 68.3
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 1.5e-37 159.5 100 67.0
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 3.3e-37 158.3 103 66.0
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 3.3e-37 158.3 101 65.3
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 4.3e-37 157.9 94 73.4
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 1.6e-36 156.0 104 65.4
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 2.3e-35 152.1 90 72.2
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 4.0e-35 151.4 103 62.1
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 6.8e-35 150.6 91 73.6
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 8.9e-35 150.2 101 62.4
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 1.2e-34 149.8 84 77.4
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 1.2e-34 149.8 100 63.0
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 1.2e-34 149.8 101 63.4
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 1.5e-34 149.4 102 60.8
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 3.4e-34 148.3 106 62.3
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 5.7e-34 147.5 104 63.5
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 9.8e-34 146.7 101 69.3
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 9.8e-34 146.7 101 69.3
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.7e-33 146.0 103 61.2
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 2.2e-33 145.6 102 60.8
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 2.2e-33 145.6 92 70.7
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 4.9e-33 144.4 104 60.6
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 6.4e-33 144.1 101 59.4
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 6.4e-33 144.1 100 60.0
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 5.4e-32 141.0 101 60.4
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 5.4e-32 141.0 101 60.4
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 7.0e-32 140.6 91 68.1
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 1.6e-31 139.4 106 57.5
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 1.6e-31 139.4 106 57.5
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 1.7e-30 136.0 123 54.5
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 3.0e-30 135.2 63 85.7
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 3.9e-30 134.8 99 57.6
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 1.9e-29 132.5 102 56.9
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 7.3e-29 130.6 103 57.3
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.2e-28 129.8 84 66.7
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 2.8e-28 128.6 98 55.1
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 6.2e-28 127.5 93 60.2
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 2.0e-26 122.5 103 54.4
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 3.4e-26 121.7 103 52.4
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 3.4e-26 121.7 91 58.2
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 5.8e-26 120.9 88 59.1
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 7.5e-26 120.6 75 66.7
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 3.7e-25 118.2 100 48.0
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 1.1e-24 116.7 103 51.5
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 1.4e-24 116.3 103 51.5
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 1.9e-24 115.9 102 51.0
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 2.4e-24 115.5 97 52.6
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 4.6e-23 111.3 100 50.0
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 4.6e-23 111.3 103 48.5
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 1.0e-22 110.2 101 48.5
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 1.3e-22 109.8 100 50.0
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 1.7e-22 109.4 63 66.7
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 1.7e-22 109.4 100 50.0
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 2.5e-21 105.5 52 78.8
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 3.3e-21 105.1 107 45.8
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 6.2e-20 100.9 92 52.2
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 6.8e-19 97.4 111 42.3
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 3.4e-18 95.1 110 40.9
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 1.7e-17 92.8 91 47.3
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 1.4e-16 89.7 49 75.5
MCO14G029 Micromonas commoda HOM05D007077 ORTHO05D008853 6.8e-11 70.9 100 34.0
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 1.5e-10 69.7 93 36.6
QL03p062338 Quercus lobata HOM05D007077 ORTHO05D008853 2.9e-09 65.5 59 61.0
Cre03.g201050 Chlamydomonas reinhardtii HOM05D007375 ORTHO05D009293 8.6e-06 53.9 95 33.7


User provided reference genes

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