Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G2311 Fragaria x ananassa HOM05D007452 ORTHO05D009375 3.8e-67 258.1 135 100.0
FAN28G0080 Fragaria x ananassa HOM05D007452 ORTHO05D009375 1.9e-66 255.8 135 98.5
FAN26G0145 Fragaria x ananassa HOM05D007452 ORTHO05D009375 4.3e-66 254.6 135 98.5
FvH4_1g05720 Fragaria vesca HOM05D007452 ORTHO05D009375 5.6e-66 254.2 135 97.0
FAN19G0597 Fragaria x ananassa HOM05D007452 ORTHO05D009375 2.8e-65 251.9 135 96.3
Prupe.7G224900 Prunus persica HOM05D007452 ORTHO05D009375 1.2e-57 226.5 139 86.3
MD02G1057900 Malus domestica HOM05D007452 ORTHO05D009375 8.0e-57 223.8 139 84.9
MD15G1192300 Malus domestica HOM05D007452 ORTHO05D009375 8.9e-56 220.3 137 84.7
RcHm_v2.0_Chr2g0091331 Rosa chinensis HOM05D007452 ORTHO05D009375 6.4e-54 214.2 134 85.1
Haze_25788 Corylus avellana HOM05D007452 ORTHO05D009375 2.3e-48 195.7 135 74.1
QL02p043240 Quercus lobata HOM05D007452 ORTHO05D009375 5.2e-48 194.5 131 75.6
QL02p044487 Quercus lobata HOM05D007452 ORTHO05D009375 5.2e-48 194.5 131 75.6
Sed0023851 Sechium edule HOM05D007452 ORTHO05D009375 1.2e-47 193.4 135 72.6
COL.COLO4_34802 Corchorus olitorius HOM05D007452 ORTHO05D009375 3.4e-47 191.8 137 70.1
MELO3C024705.2 Cucumis melo HOM05D007452 ORTHO05D009375 2.9e-46 188.7 135 72.6
PGR102G0901 Punica granatum HOM05D007452 ORTHO05D009375 6.4e-46 187.6 134 71.6
Atru.chr7.1416 Acer truncatum HOM05D007452 ORTHO05D009375 1.9e-45 186.0 143 66.4
Ciclev10009852m.g Citrus clementina HOM05D007452 ORTHO05D009375 2.4e-45 185.7 135 71.9
Nitab4.5_0002165g0070 Nicotiana tabacum HOM05D007452 ORTHO05D009375 2.4e-45 185.7 133 71.4
Nitab4.5_0003331g0020 Nicotiana tabacum HOM05D007452 ORTHO05D009375 3.2e-45 185.3 133 71.4
TWI34G0936 Tripterygium wilfordii HOM05D007452 ORTHO05D009375 5.4e-45 184.5 138 68.1
PGSC0003DMG400023982 Solanum tuberosum HOM05D007452 ORTHO05D009375 7.1e-45 184.1 133 69.9
Solyc11g006870.1 Solanum lycopersicum HOM05D007452 ORTHO05D009375 9.2e-45 183.7 133 69.2
Sopen11g002770 Solanum pennellii HOM05D007452 ORTHO05D009375 9.2e-45 183.7 133 69.2
Thecc.09G105200 Theobroma cacao HOM05D007452 ORTHO05D009375 9.2e-45 183.7 137 68.6
Cc06_g10100 Coffea canephora HOM05D007452 ORTHO05D009375 3.5e-44 181.8 133 68.4
vmacro06236 Vaccinium macrocarpon HOM05D007452 ORTHO05D009375 4.6e-44 181.4 133 69.2
Ca_17318_v3 Cicer arietinum L. HOM05D007452 ORTHO05D009375 1.0e-43 180.3 133 71.4
Nitab4.5_0000066g0140 Nicotiana tabacum HOM05D007452 ORTHO05D009375 1.0e-43 180.3 133 68.4
Gohir.D06G063500 Gossypium hirsutum HOM05D007452 ORTHO05D009375 1.3e-43 179.9 137 69.3
MSTRG.19570 Avicennia marina HOM05D007452 ORTHO05D009375 3.9e-43 178.3 130 70.8
GSVIVG01015344001 Vitis vinifera HOM05D007452 ORTHO05D009375 3.9e-43 178.3 136 68.4
Oeu002255.1 Olea europaea HOM05D007452 ORTHO05D009375 5.1e-43 177.9 132 67.4
AUR62021449 Chenopodium quinoa HOM05D007452 ORTHO05D009375 8.6e-43 177.2 133 66.2
Lsat_1_v5_gn_5_147400 Lactuca sativa HOM05D007452 ORTHO05D009375 8.6e-43 177.2 134 64.9
Glyma.08G035800 Glycine max HOM05D007452 ORTHO05D009375 3.3e-42 175.3 130 70.8
CAN.G645.18 Capsicum annuum HOM05D007452 ORTHO05D009375 5.6e-42 174.5 134 66.4
Phvul.002G311100 Phaseolus vulgaris HOM05D007452 ORTHO05D009375 5.6e-42 174.5 130 70.0
HanXRQChr10g0318511 Helianthus annuus HOM05D007452 ORTHO05D009375 9.5e-42 173.7 135 65.2
Migut.J01126 Erythranthe guttata HOM05D007452 ORTHO05D009375 1.6e-41 172.9 134 68.7
Psat7g014560 Pisum sativum HOM05D007452 ORTHO05D009375 1.6e-41 172.9 133 68.4
AT5G19570 Arabidopsis thaliana HOM05D007452 ORTHO05D009375 2.1e-41 172.6 136 62.5
unitig_899.g15033 Utricularia gibba HOM05D007452 ORTHO05D009375 2.8e-41 172.2 134 67.9
CARHR193330 Cardamine hirsuta HOM05D007452 ORTHO05D009375 3.6e-41 171.8 136 64.0
Cfa003221 Carpinus fangiana HOM05D007452 ORTHO05D009375 4.7e-41 171.4 123 71.5
Potri.018G084400 Populus trichocarpa HOM05D007452 ORTHO05D009375 4.7e-41 171.4 137 68.6
Dinv41642 Davidia involucrata HOM05D007452 ORTHO05D009375 8.1e-41 170.6 120 72.5
BcaB05g23392 Brassica carinata HOM05D007452 ORTHO05D009375 1.1e-40 170.2 140 61.4
SalBow6G2888 Salvia bowleyana HOM05D007452 ORTHO05D009375 1.1e-40 170.2 130 70.8
ClCG06G008870 Citrullus lanatus HOM05D007452 ORTHO05D009375 1.4e-40 169.9 116 75.0
Medtr8g102920 Medicago truncatula HOM05D007452 ORTHO05D009375 3.1e-40 168.7 131 67.2
Sabra18G0072700 Salix brachista HOM05D007452 ORTHO05D009375 3.1e-40 168.7 137 68.6
A02p05660 Brassica napus HOM05D007452 ORTHO05D009375 4.0e-40 168.3 141 62.4
THA.LOC104799068 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 4.0e-40 168.3 135 62.2
THA.LOC104808980 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 4.0e-40 168.3 135 62.2
AL6G31080 Arabidopsis lyrata HOM05D007452 ORTHO05D009375 1.2e-39 166.8 137 60.6
TAR636G3481 Trochodendron aralioides HOM05D007452 ORTHO05D009375 1.5e-39 166.4 134 63.4
SGA_v2.0_scaffold10G05148 Striga asiatica HOM05D007452 ORTHO05D009375 2.0e-39 166.0 130 67.7
BraA02t05518Z Brassica rapa HOM05D007452 ORTHO05D009375 2.6e-39 165.6 140 60.7
Thhalv10014912m.g Eutrema salsugineum HOM05D007452 ORTHO05D009375 2.6e-39 165.6 137 60.6
Nn2g11650 Nelumbo nucifera HOM05D007452 ORTHO05D009375 3.4e-39 165.2 134 63.4
PSO210G5570 Papaver somniferum HOM05D007452 ORTHO05D009375 3.4e-39 165.2 133 63.2
Ah.09g230860 Amaranthus hybridus HOM05D007452 ORTHO05D009375 4.4e-39 164.9 135 63.0
BcaC03g13689 Brassica carinata HOM05D007452 ORTHO05D009375 7.6e-39 164.1 136 61.0
BNapus_Darmor_BZH_scaffold_38p02290 Brassica napus HOM05D007452 ORTHO05D009375 7.6e-39 164.1 136 61.0
CiPaw.04G161200 Carya illinoinensis HOM05D007452 ORTHO05D009375 9.9e-39 163.7 127 66.9
Gorai.010G074100 Gossypium raimondii HOM05D007452 ORTHO05D009375 9.9e-39 163.7 123 69.1
Aqoxy7G01521 Aquilegia oxysepala HOM05D007452 ORTHO05D009375 3.8e-38 161.8 128 65.6
Gohir.A06G065000 Gossypium hirsutum HOM05D007452 ORTHO05D009375 8.4e-38 160.6 123 69.1
Duzib187G0798 Durio zibethinus HOM05D007452 ORTHO05D009375 1.1e-37 160.2 121 66.9
Eucgr.C01281 Eucalyptus grandis HOM05D007452 ORTHO05D009375 1.4e-37 159.8 134 64.9
Glyma.05G228800 Glycine max HOM05D007452 ORTHO05D009375 2.4e-37 159.1 132 65.9
Lalb_Chr05g0223071 Lupinus albus HOM05D007452 ORTHO05D009375 2.4e-37 159.1 124 68.5
Peaxi162Scf00539g00066 Petunia axillaris HOM05D007452 ORTHO05D009375 2.4e-37 159.1 115 68.7
DCAR_012055 Daucus carota HOM05D007452 ORTHO05D009375 4.1e-37 158.3 133 63.9
Carub.0006s1792 Capsella rubella HOM05D007452 ORTHO05D009375 7.1e-37 157.5 139 58.3
Rhsim03G0239200 Rhododendron simsii HOM05D007452 ORTHO05D009375 4.6e-36 154.8 120 68.3
HPP92_008140 Vanilla planifolia HOM05D007452 ORTHO05D009375 1.1e-34 150.2 135 58.5
Manes.03G024500 Manihot esculenta HOM05D007452 ORTHO05D009375 2.5e-34 149.1 121 65.3
CsaV3_1G020810 Cucumis sativus L. HOM05D007452 ORTHO05D009375 9.6e-34 147.1 101 74.3
Aa31LG5G13720 Aethionema arabicum HOM05D007452 ORTHO05D009375 2.1e-33 146.0 115 63.5
ATR0315G055 Amborella trichopoda HOM05D007452 ORTHO05D009375 3.6e-33 145.2 128 59.4
Os05g0188300 Oryza sativa ssp. japonica HOM05D007452 ORTHO05D009375 6.2e-33 144.4 133 58.6
BolC2t06971H Brassica oleracea HOM05D007452 ORTHO05D009375 1.8e-32 142.9 122 59.8
HanXRQChr03g0087651 Helianthus annuus HOM05D007452 ORTHO05D009375 3.1e-32 142.1 124 59.7
Sc08g0007740 Simmondsia chinensis HOM05D007452 ORTHO05D009375 3.1e-32 142.1 133 54.1
CiPaw.08G085300 Carya illinoinensis HOM05D007452 ORTHO05D009375 4.0e-32 141.7 128 61.7
CDE02G1573 Ceratophyllum demersum HOM05D007452 ORTHO05D009375 6.9e-32 141.0 130 56.9
Sopen08g027980 Solanum pennellii HOM05D007452 ORTHO05D009375 2.6e-31 139.0 127 59.8
Zm00001eb089090 Zea mays HOM05D007452 ORTHO05D009375 1.1e-29 133.7 133 55.6
EL10Ac8g18425 Beta vulgaris HOM05D007452 ORTHO05D009375 1.4e-29 133.3 109 63.3
CSS0004194 Camellia sinensis var. sinensis HOM05D007452 ORTHO05D009375 9.3e-29 130.6 126 61.9
MBI04_g14927_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 9.3e-29 130.6 112 60.7
SEGI_20837 Sequoiadendron giganteum HOM05D007452 ORTHO05D009375 7.8e-28 127.5 135 54.1
Cfa001992 Carpinus fangiana HOM05D007452 ORTHO05D009375 1.5e-26 123.2 92 71.7
HanXRQChr02g0047631 Helianthus annuus HOM05D007452 ORTHO05D009375 3.1e-24 115.5 114 55.3
SMO119G0523 Selaginella moellendorffii HOM05D007452 ORTHO05D009375 3.8e-22 108.6 125 48.0
Pp3c5_13600 Physcomitrium patens HOM05D007452 ORTHO05D009375 4.6e-20 101.7 131 45.0
Mapoly0005s0019 Marchantia polymorpha HOM05D007452 ORTHO05D009375 1.1e-18 97.1 131 42.0
AagrBONN_evm.TU.Sc2ySwM_117.3226 Anthoceros agrestis HOM05D007452 ORTHO05D009375 3.8e-14 82.0 125 40.8
MBI12_g37480_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 1.4e-08 63.5 55 60.0


User provided reference genes

Program Settings