Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.1e-167 593.2 288 100.0
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 1.4e-143 513.1 259 95.8
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 1.8e-143 512.7 252 98.4
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.8e-143 512.7 252 98.4
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 5.4e-143 511.1 250 98.8
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.5e-132 476.5 252 93.3
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 1.3e-125 453.4 256 88.7
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 5.1e-125 451.4 254 87.4
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 4.3e-108 395.2 255 76.1
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 9.6e-108 394.0 252 74.6
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 1.3e-107 393.7 255 74.5
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 2.1e-107 392.9 252 75.0
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 2.8e-107 392.5 215 84.7
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 2.4e-106 389.4 252 74.6
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 6.9e-106 387.9 256 73.4
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 6.9e-106 387.9 256 72.7
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 6.9e-106 387.9 251 72.5
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 1.2e-105 387.1 245 75.5
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 7.6e-105 384.4 255 73.3
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 7.6e-105 384.4 246 76.4
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 4.2e-103 378.6 221 78.7
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 2.7e-102 375.9 228 76.8
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 1.3e-101 373.6 226 79.2
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 3.9e-101 372.1 273 67.8
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 6.6e-101 371.3 248 73.8
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 5.6e-100 368.2 253 68.8
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 7.4e-100 367.9 238 72.3
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 9.6e-100 367.5 244 74.6
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 1.3e-99 367.1 245 71.0
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 2.8e-99 365.9 256 70.3
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 2.8e-99 365.9 226 77.4
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 3.6e-99 365.5 218 78.9
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 1.8e-98 363.2 250 70.0
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 1.8e-98 363.2 250 70.0
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 1.8e-98 363.2 229 76.4
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 9.0e-98 360.9 244 70.9
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 9.0e-98 360.9 251 69.3
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 2.6e-97 359.4 205 80.5
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 4.5e-97 358.6 223 74.4
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 4.5e-97 358.6 243 70.4
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 7.6e-97 357.8 231 74.9
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 9.9e-97 357.5 258 68.2
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 1.7e-96 356.7 239 71.1
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.7e-96 356.7 248 70.6
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 1.7e-96 356.7 246 69.1
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 4.9e-96 355.1 219 77.6
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 8.4e-96 354.4 248 69.0
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 8.4e-96 354.4 238 74.8
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 1.4e-95 353.6 248 69.0
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 1.9e-95 353.2 227 75.3
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 3.2e-95 352.4 254 68.9
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 5.5e-95 351.7 263 66.9
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 7.1e-95 351.3 237 72.6
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 7.1e-95 351.3 243 70.4
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 9.3e-95 350.9 248 68.1
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 9.3e-95 350.9 242 69.8
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 1.2e-94 350.5 209 76.1
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 1.6e-94 350.1 206 79.6
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 3.5e-94 349.0 251 69.3
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 3.5e-94 349.0 203 79.8
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 4.6e-94 348.6 218 75.7
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 7.9e-94 347.8 249 68.3
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 7.9e-94 347.8 245 68.6
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 3.0e-93 345.9 227 74.0
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 3.9e-93 345.5 205 78.0
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 5.1e-93 345.1 217 73.7
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 5.1e-93 345.1 230 74.3
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 1.9e-92 343.2 195 80.5
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 1.9e-92 343.2 206 78.6
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 4.3e-92 342.0 206 78.2
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 5.6e-92 341.7 288 60.4
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 5.6e-92 341.7 248 67.7
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 5.6e-92 341.7 246 67.9
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 1.6e-91 340.1 223 71.7
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 3.1e-90 335.9 202 76.7
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 4.0e-90 335.5 249 67.9
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 5.3e-90 335.1 246 66.7
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 2.6e-89 332.8 188 80.3
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 2.6e-89 332.8 248 68.5
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 1.3e-88 330.5 202 77.2
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 9.3e-87 324.3 221 70.1
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 2.7e-86 322.8 258 62.4
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 3.5e-86 322.4 183 78.7
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 6.7e-85 318.2 247 64.0
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 1.1e-84 317.4 182 79.7
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 2.5e-84 316.2 254 60.2
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 9.6e-84 314.3 203 72.4
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 9.6e-84 314.3 209 71.8
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 1.3e-83 313.9 218 70.2
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 2.4e-82 309.7 202 72.8
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 1.2e-81 307.4 175 82.3
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 3.4e-81 305.8 178 80.3
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 3.4e-81 305.8 250 62.8
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 2.2e-80 303.1 169 82.2
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 1.6e-78 297.0 170 78.2
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 7.4e-76 288.1 171 77.8
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 5.5e-71 271.9 218 62.8
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 1.5e-68 263.8 201 63.2
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.0e-64 251.1 182 67.6
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 9.4e-63 244.6 262 51.9
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.7e-62 243.0 139 82.0
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 3.1e-58 229.6 174 58.6
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 1.2e-57 227.6 200 53.5
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 1.0e-56 224.6 198 54.5
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 1.9e-47 193.7 256 48.0
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 2.2e-40 170.2 175 52.6
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 2.1e-38 163.7 210 45.7
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 9.2e-26 121.7 75 77.3
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 2.7e-25 120.2 64 81.2
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 3.3e-23 113.2 170 40.0
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 7.3e-23 112.1 60 80.0
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 8.9e-21 105.1 80 62.5
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 5.4e-10 69.3 62 48.4


User provided reference genes

Program Settings