Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G2152 Fragaria x ananassa HOM05D005883 ORTHO05D007682 1.3e-79 299.7 153 100.0
FAN19G1709 Fragaria x ananassa HOM05D005883 ORTHO05D007682 1.3e-55 219.9 121 94.2
FAN23G0164 Fragaria x ananassa HOM05D005883 ORTHO05D007682 3.8e-55 218.4 121 94.2
FAN28G1490 Fragaria x ananassa HOM05D005883 ORTHO05D007682 6.5e-55 217.6 121 94.2
RcHm_v2.0_Chr2g0107371 Rosa chinensis HOM05D005883 ORTHO05D007682 3.1e-49 198.7 124 85.5
Prupe.6G224200 Prunus persica HOM05D005883 ORTHO05D007682 1.5e-43 179.9 156 65.4
MD02G1182200 Malus domestica HOM05D005883 ORTHO05D007682 1.8e-41 172.9 153 63.4
MD15G1293400 Malus domestica HOM05D005883 ORTHO05D007682 2.7e-40 169.1 153 62.1
Haze_15313 Corylus avellana HOM05D005883 ORTHO05D007682 1.3e-34 150.2 124 66.1
CANSAT01G1476 Cannabis sativa HOM05D005883 ORTHO05D007682 3.2e-33 145.6 124 61.3
Eucgr.I00721 Eucalyptus grandis HOM05D005883 ORTHO05D007682 1.7e-31 139.8 124 62.1
Manes.12G111900 Manihot esculenta HOM05D005883 ORTHO05D007682 3.0e-31 139.0 125 61.6
TWI09G1323 Tripterygium wilfordii HOM05D005883 ORTHO05D007682 3.3e-30 135.6 124 59.7
Sed0006936 Sechium edule HOM05D005883 ORTHO05D007682 5.6e-30 134.8 153 49.7
Dinv26902 Davidia involucrata HOM05D005883 ORTHO05D007682 7.3e-30 134.4 124 57.3
Lj2g0016940 Lotus japonicus HOM05D005883 ORTHO05D007682 2.8e-29 132.5 124 58.1
Atru.chr3.169 Acer truncatum HOM05D005883 ORTHO05D007682 3.6e-29 132.1 124 56.5
Atru.chr3.198 Acer truncatum HOM05D005883 ORTHO05D007682 3.6e-29 132.1 124 56.5
CAN.G1075.14 Capsicum annuum HOM05D005883 ORTHO05D007682 4.7e-29 131.7 153 48.4
Peaxi162Scf00264g00325 Petunia axillaris HOM05D005883 ORTHO05D007682 4.7e-29 131.7 153 45.1
Rhsim10G0103900 Rhododendron simsii HOM05D005883 ORTHO05D007682 4.7e-29 131.7 124 55.6
Ciclev10025596m.g Citrus clementina HOM05D005883 ORTHO05D007682 1.0e-28 130.6 124 57.3
CsaV3_6G043870 Cucumis sativus L. HOM05D005883 ORTHO05D007682 1.0e-28 130.6 124 55.6
Nitab4.5_0010920g0010 Nicotiana tabacum HOM05D005883 ORTHO05D007682 1.4e-28 130.2 153 46.4
Oeu040596.1 Olea europaea HOM05D005883 ORTHO05D007682 1.8e-28 129.8 124 54.8
Lj7A87T53 Lonicera japonica HOM05D005883 ORTHO05D007682 8.9e-28 127.5 124 55.6
MELO3C007612.2 Cucumis melo HOM05D005883 ORTHO05D007682 1.5e-27 126.7 124 54.8
Thecc.01G068700 Theobroma cacao HOM05D005883 ORTHO05D007682 2.6e-27 125.9 126 54.0
CSS0008300 Camellia sinensis var. sinensis HOM05D005883 ORTHO05D007682 4.4e-27 125.2 124 57.3
CSS0038059 Camellia sinensis var. sinensis HOM05D005883 ORTHO05D007682 4.4e-27 125.2 124 57.3
Dinv30066 Davidia involucrata HOM05D005883 ORTHO05D007682 4.4e-27 125.2 161 47.2
COL.COLO4_11536 Corchorus olitorius HOM05D005883 ORTHO05D007682 7.5e-27 124.4 124 53.2
Gohir.D11G206200 Gossypium hirsutum HOM05D005883 ORTHO05D007682 1.3e-26 123.6 125 54.4
Gorai.007G221400 Gossypium raimondii HOM05D005883 ORTHO05D007682 1.7e-26 123.2 125 53.6
Oeu054182.1 Olea europaea HOM05D005883 ORTHO05D007682 1.7e-26 123.2 124 52.4
Actinidia36443 Actinidia chinensis HOM05D005883 ORTHO05D007682 2.9e-26 122.5 124 53.2
Glyma.01G191800 Glycine max HOM05D005883 ORTHO05D007682 2.9e-26 122.5 124 53.2
Peaxi162Scf01526g00016 Petunia axillaris HOM05D005883 ORTHO05D007682 3.7e-26 122.1 124 51.6
Sopen02g037210 Solanum pennellii HOM05D005883 ORTHO05D007682 3.7e-26 122.1 153 46.4
Actinidia11997 Actinidia chinensis HOM05D005883 ORTHO05D007682 4.9e-26 121.7 124 51.6
Solyc02g092660.3 Solanum lycopersicum HOM05D005883 ORTHO05D007682 4.9e-26 121.7 153 45.8
ClCG01G017340 Citrullus lanatus HOM05D005883 ORTHO05D007682 6.4e-26 121.3 124 55.6
Lalb_Chr09g0323471 Lupinus albus HOM05D005883 ORTHO05D007682 1.1e-25 120.6 124 51.6
Medtr5g016080 Medicago truncatula HOM05D005883 ORTHO05D007682 2.4e-25 119.4 124 49.2
Nn5g30515 Nelumbo nucifera HOM05D005883 ORTHO05D007682 2.4e-25 119.4 153 49.0
arahy.Tifrunner.gnm1.ann1.6C4QPH Arachis hypogaea HOM05D005883 ORTHO05D007682 3.2e-25 119.0 124 52.4
arahy.Tifrunner.gnm1.ann1.L7VX2V Arachis hypogaea HOM05D005883 ORTHO05D007682 3.2e-25 119.0 124 52.4
Cpa.g.sc6.49 Carica papaya HOM05D005883 ORTHO05D007682 4.1e-25 118.6 124 51.6
TAR381G0554 Trochodendron aralioides HOM05D005883 ORTHO05D007682 4.1e-25 118.6 124 54.0
CSS0036151 Camellia sinensis var. sinensis HOM05D005883 ORTHO05D007682 5.4e-25 118.2 124 50.8
CSS0047219 Camellia sinensis var. sinensis HOM05D005883 ORTHO05D007682 5.4e-25 118.2 124 50.8
Gohir.A11G217100 Gossypium hirsutum HOM05D005883 ORTHO05D007682 5.4e-25 118.2 125 52.0
vmacro05385 Vaccinium macrocarpon HOM05D005883 ORTHO05D007682 5.4e-25 118.2 124 50.0
MSTRG.2834 Avicennia marina HOM05D005883 ORTHO05D007682 7.0e-25 117.9 124 49.2
Duzib147G0265 Durio zibethinus HOM05D005883 ORTHO05D007682 7.0e-25 117.9 124 51.6
VMungo1215G0629 Vigna mungo HOM05D005883 ORTHO05D007682 1.2e-24 117.1 124 51.6
Phvul.002G013100 Phaseolus vulgaris HOM05D005883 ORTHO05D007682 2.0e-24 116.3 124 51.6
Lalb_Chr16g0378771 Lupinus albus HOM05D005883 ORTHO05D007682 2.7e-24 115.9 124 50.8
Glyma.11G050300 Glycine max HOM05D005883 ORTHO05D007682 4.6e-24 115.2 125 52.0
Nitab4.5_0001119g0030 Nicotiana tabacum HOM05D005883 ORTHO05D007682 4.6e-24 115.2 167 41.3
Migut.L00197 Erythranthe guttata HOM05D005883 ORTHO05D007682 6.0e-24 114.8 124 50.0
TPR.G20942 Trifolium pratense HOM05D005883 ORTHO05D007682 6.0e-24 114.8 124 48.4
Cc07_g06800 Coffea canephora HOM05D005883 ORTHO05D007682 1.0e-23 114.0 126 53.2
PSO541G2663 Papaver somniferum HOM05D005883 ORTHO05D007682 1.0e-23 114.0 128 53.9
GSVIVG01000152001 Vitis vinifera HOM05D005883 ORTHO05D007682 1.3e-23 113.6 121 54.5
THA.LOC104804202 Tarenaya hassleriana HOM05D005883 ORTHO05D007682 1.7e-23 113.2 124 52.4
Nn1g04621 Nelumbo nucifera HOM05D005883 ORTHO05D007682 3.9e-23 112.1 153 47.7
SGA_v2.0_scaffold13G06475 Striga asiatica HOM05D005883 ORTHO05D007682 5.0e-23 111.7 152 43.4
Psat2g170240 Pisum sativum HOM05D005883 ORTHO05D007682 6.6e-23 111.3 124 47.6
PSO675G6665 Papaver somniferum HOM05D005883 ORTHO05D007682 1.5e-22 110.2 128 53.1
THA.LOC104807620 Tarenaya hassleriana HOM05D005883 ORTHO05D007682 1.5e-22 110.2 124 50.8
Gohir.D12G072900 Gossypium hirsutum HOM05D005883 ORTHO05D007682 1.9e-22 109.8 124 50.0
Gorai.008G080200 Gossypium raimondii HOM05D005883 ORTHO05D007682 2.5e-22 109.4 124 50.0
Duzib187G0578 Durio zibethinus HOM05D005883 ORTHO05D007682 3.3e-22 109.0 125 51.2
Hund16381 Selenicereus undatus HOM05D005883 ORTHO05D007682 5.6e-22 108.2 155 43.9
Aqoxy6G02739 Aquilegia oxysepala HOM05D005883 ORTHO05D007682 9.5e-22 107.5 126 46.8
Aa31LG7G13800 Aethionema arabicum HOM05D005883 ORTHO05D007682 2.8e-21 105.9 124 49.2
Carub.0004s0230 Capsella rubella HOM05D005883 ORTHO05D007682 8.1e-21 104.4 124 47.6
CARHR114450 Cardamine hirsuta HOM05D005883 ORTHO05D007682 8.1e-21 104.4 124 48.4
Thhalv10000163m.g Eutrema salsugineum HOM05D005883 ORTHO05D007682 8.1e-21 104.4 124 47.6
BraA09t41102Z Brassica rapa HOM05D005883 ORTHO05D007682 1.8e-20 103.2 124 48.4
Sp4g02120 Schrenkiella parvula HOM05D005883 ORTHO05D007682 2.3e-20 102.8 124 46.8
Sc18g0004330 Simmondsia chinensis HOM05D005883 ORTHO05D007682 3.1e-20 102.4 153 41.2
HanXRQChr12g0376921 Helianthus annuus HOM05D005883 ORTHO05D007682 4.0e-20 102.1 124 46.8
BcaC07g41008 Brassica carinata HOM05D005883 ORTHO05D007682 5.2e-20 101.7 124 47.6
A09p57100 Brassica napus HOM05D005883 ORTHO05D007682 6.8e-20 101.3 124 46.8
Lsat_1_v5_gn_3_88140 Lactuca sativa HOM05D005883 ORTHO05D007682 6.8e-20 101.3 124 46.0
C08p40120 Brassica napus HOM05D005883 ORTHO05D007682 2.0e-19 99.8 124 46.8
AUR62040273 Chenopodium quinoa HOM05D005883 ORTHO05D007682 2.6e-19 99.4 153 39.2
TAR625G0402 Trochodendron aralioides HOM05D005883 ORTHO05D007682 2.6e-19 99.4 168 42.9
AUR62003972 Chenopodium quinoa HOM05D005883 ORTHO05D007682 3.7e-18 95.5 153 39.9
Potri.007G052700 Populus trichocarpa HOM05D005883 ORTHO05D007682 3.7e-18 95.5 156 39.7
HPP92_001545 Vanilla planifolia HOM05D005883 ORTHO05D007682 6.4e-18 94.7 124 43.5
unitig_46.g18307 Utricularia gibba HOM05D005883 ORTHO05D007682 1.6e-16 90.1 145 38.6
BolC8t51582H Brassica oleracea HOM05D005883 ORTHO05D007682 6.0e-16 88.2 148 39.9
Ah.02g125640 Amaranthus hybridus HOM05D005883 ORTHO05D007682 1.7e-15 86.7 153 35.9
ATR0810G056 Amborella trichopoda HOM05D005883 ORTHO05D007682 2.3e-15 86.3 122 43.4
Gohir.D04G068300 Gossypium hirsutum HOM05D005883 ORTHO05D046953 5.1e-15 85.1 78 56.4
Nitab4.5_0009137g0020 Nicotiana tabacum HOM05D005883 ORTHO05D007682 1.1e-14 84.0 128 39.1
Ca_24720_v3 Cicer arietinum L. HOM05D001054 ORTHO05D007110 1.9e-14 83.2 75 57.3
HPP92_020944 Vanilla planifolia HOM05D005883 ORTHO05D007682 7.3e-14 81.3 124 38.7
Sabra07G0046300 Salix brachista HOM05D005883 ORTHO05D007682 2.1e-13 79.7 119 42.9
FAN19G1726 Fragaria x ananassa HOM05D005883 ORTHO05D204556 6.2e-13 78.2 60 75.0
Gorai.012G094300 Gossypium raimondii HOM05D005883 ORTHO05D046953 1.1e-12 77.4 62 59.7
Os08g0113800 Oryza sativa ssp. japonica HOM05D005883 ORTHO05D007682 6.8e-12 74.7 125 40.0
EL10Ac6g15655 Beta vulgaris HOM05D005883 ORTHO05D007682 1.2e-11 73.9 160 33.8
Cfa004098 Carpinus fangiana HOM05D005883 ORTHO05D007682 2.2e-10 69.7 46 69.6
Migut.L00196 Erythranthe guttata HOM05D005883 ORTHO05D007682 4.9e-10 68.6 124 37.1
CiPaw.01G007400 Carya illinoinensis HOM05D005883 ORTHO05D007682 6.4e-10 68.2 46 65.2
AL4G12930 Arabidopsis lyrata HOM05D005883 ORTHO05D007682 1.1e-09 67.4 46 65.2
Zm00001eb173940 Zea mays HOM05D005883 ORTHO05D007682 1.4e-09 67.0 125 39.2
CDE05G2453 Ceratophyllum demersum HOM05D005883 ORTHO05D007682 1.9e-09 66.6 61 50.8
Eucgr.E01100 Eucalyptus grandis HOM05D005883 ORTHO05D007682 5.4e-09 65.1 46 67.4
MBI05_g33511_MAGBIO Magnolia biondii HOM05D005883 ORTHO05D007682 5.4e-09 65.1 68 51.5
MSTRG.23695 Avicennia marina HOM05D005883 ORTHO05D007682 9.2e-09 64.3 46 58.7
Nitab4.5_0001772g0070 Nicotiana tabacum HOM05D005883 ORTHO05D007682 3.5e-08 62.4 46 54.3
PGSC0003DMG400024940 Solanum tuberosum HOM05D005883 ORTHO05D007682 3.5e-08 62.4 75 40.0
SalBow5G5022 Salvia bowleyana HOM05D005883 ORTHO05D007682 7.8e-08 61.2 45 60.0
AT2G23093 Arabidopsis thaliana HOM05D005883 ORTHO05D007682 1.3e-07 60.5 46 60.9
ECA246G3130 Erigeron canadensis HOM05D005883 ORTHO05D007682 5.1e-07 58.5 46 56.5
DCAR_025777 Daucus carota HOM05D005883 ORTHO05D007682 7.3e-06 54.7 65 47.7


User provided reference genes

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