Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G2148 Fragaria x ananassa HOM05D006130 ORTHO05D007491 1.6e-219 765.8 372 100.0
FAN23G0816 Fragaria x ananassa HOM05D006130 ORTHO05D007491 8.4e-197 690.3 378 89.4
FAN19G1269 Fragaria x ananassa HOM05D006130 ORTHO05D007491 4.1e-196 688.0 378 89.2
RcHm_v2.0_Chr2g0117041 Rosa chinensis HOM05D006130 ORTHO05D007491 1.2e-187 659.8 379 85.2
FvH4_1g22740 Fragaria vesca HOM05D006130 ORTHO05D007491 8.7e-162 573.9 320 89.1
MD15G1331600 Malus domestica HOM05D006130 ORTHO05D007491 5.0e-157 558.1 372 73.9
Prupe.6G171600 Prunus persica HOM05D006130 ORTHO05D007491 2.6e-142 509.2 378 66.9
QL06p031976 Quercus lobata HOM05D006130 ORTHO05D007491 2.9e-141 505.8 378 65.1
Cfa002758 Carpinus fangiana HOM05D006130 ORTHO05D007491 7.2e-140 501.1 380 64.2
Haze_25050 Corylus avellana HOM05D006130 ORTHO05D007491 6.1e-139 498.0 379 63.9
CiPaw.04G091300 Carya illinoinensis HOM05D006130 ORTHO05D007491 3.1e-135 485.7 382 62.0
Dinv42687 Davidia involucrata HOM05D006130 ORTHO05D007491 5.5e-132 474.9 374 61.8
Atru.chr4.339 Acer truncatum HOM05D006130 ORTHO05D007491 1.8e-130 469.9 383 60.8
CANSAT80G2857 Cannabis sativa HOM05D006130 ORTHO05D007491 2.0e-129 466.5 377 61.8
Dinv19481 Davidia involucrata HOM05D006130 ORTHO05D007491 7.5e-129 464.5 374 60.7
Cpa.g.sc191.11 Carica papaya HOM05D006130 ORTHO05D007491 9.1e-127 457.6 375 57.9
Manes.12G143200 Manihot esculenta HOM05D006130 ORTHO05D007491 1.0e-125 454.1 380 60.5
Ciclev10026167m.g Citrus clementina HOM05D006130 ORTHO05D007491 2.9e-125 452.6 380 60.3
Thecc.01G113900 Theobroma cacao HOM05D006130 ORTHO05D007491 6.1e-123 444.9 379 56.5
Rhsim08G0006100 Rhododendron simsii HOM05D006130 ORTHO05D007491 1.1e-119 434.1 372 59.4
Duzib264G0573 Durio zibethinus HOM05D006130 ORTHO05D007491 5.4e-119 431.8 384 55.2
Sabra07G0067600 Salix brachista HOM05D006130 ORTHO05D007491 5.5e-116 421.8 376 57.2
Gorai.007G244700 Gossypium raimondii HOM05D006130 ORTHO05D007491 2.8e-115 419.5 370 55.7
Eucgr.H04843 Eucalyptus grandis HOM05D006130 ORTHO05D007491 3.6e-115 419.1 365 56.7
Potri.007G080500 Populus trichocarpa HOM05D006130 ORTHO05D007491 6.1e-115 418.3 379 57.8
TWI74G0604 Tripterygium wilfordii HOM05D006130 ORTHO05D007491 6.1e-115 418.3 378 56.1
Gohir.D11G231600 Gossypium hirsutum HOM05D006130 ORTHO05D007491 3.0e-114 416.0 370 55.4
Lj2C566T4 Lonicera japonica HOM05D006130 ORTHO05D007491 2.6e-113 412.9 364 57.4
Gohir.A11G197900 Gossypium hirsutum HOM05D006130 ORTHO05D007491 1.3e-112 410.6 370 55.1
MBI05_g29098_MAGBIO Magnolia biondii HOM05D006130 ORTHO05D007491 1.7e-112 410.2 386 52.1
Duzib147G1554 Durio zibethinus HOM05D006130 ORTHO05D007491 1.1e-111 407.5 340 57.6
CsaV3_6G002440 Cucumis sativus L. HOM05D006130 ORTHO05D007491 1.1e-108 397.5 368 54.1
Oeu028522.1 Olea europaea HOM05D006130 ORTHO05D007491 1.1e-108 397.5 369 53.7
ClCG11G005560 Citrullus lanatus HOM05D006130 ORTHO05D007491 3.3e-108 396.0 376 54.0
Cc07_g16320 Coffea canephora HOM05D006130 ORTHO05D007491 3.3e-108 396.0 374 53.7
MELO3C025043.2 Cucumis melo HOM05D006130 ORTHO05D007491 3.6e-107 392.5 373 53.1
Nn5g28889 Nelumbo nucifera HOM05D006130 ORTHO05D007491 8.0e-107 391.3 397 52.1
Sed0017229 Sechium edule HOM05D006130 ORTHO05D007491 1.8e-106 390.2 378 52.6
Lalb_Chr11g0068091 Lupinus albus HOM05D006130 ORTHO05D007491 3.0e-106 389.4 371 52.6
vmacro18637 Vaccinium macrocarpon HOM05D006130 ORTHO05D007491 1.5e-105 387.1 345 57.7
PGR102G0730 Punica granatum HOM05D006130 ORTHO05D007491 9.8e-105 384.4 382 52.9
CAN.G347.1 Capsicum annuum HOM05D006130 ORTHO05D007491 4.9e-104 382.1 366 53.3
Aqoxy7G04042 Aquilegia oxysepala HOM05D006130 ORTHO05D007491 6.4e-104 381.7 376 51.9
GSVIVG01022236001 Vitis vinifera HOM05D006130 ORTHO05D007491 6.4e-104 381.7 383 52.5
Eucgr.H04852 Eucalyptus grandis HOM05D006130 ORTHO05D007491 1.1e-103 380.9 358 53.4
PGSC0003DMG400031208 Solanum tuberosum HOM05D006130 ORTHO05D007491 2.7e-102 376.3 372 52.7
Solyc04g051780.3 Solanum lycopersicum HOM05D006130 ORTHO05D007491 3.0e-101 372.9 370 52.4
Peaxi162Scf00106g00208 Petunia axillaris HOM05D006130 ORTHO05D007491 3.9e-101 372.5 364 54.4
Sopen04g023130 Solanum pennellii HOM05D006130 ORTHO05D007491 1.2e-99 367.5 360 53.1
ECA238G3253 Erigeron canadensis HOM05D006130 ORTHO05D007491 1.6e-99 367.1 365 52.9
PSO210G3121 Papaver somniferum HOM05D006130 ORTHO05D007491 8.0e-99 364.8 382 48.4
DCAR_001374 Daucus carota HOM05D006130 ORTHO05D007491 2.3e-98 363.2 413 47.5
PSO170G1695 Papaver somniferum HOM05D006130 ORTHO05D007491 1.5e-97 360.5 383 48.6
MSTRG.15753 Avicennia marina HOM05D006130 ORTHO05D007491 4.4e-97 359.0 369 51.8
Hund03536 Selenicereus undatus HOM05D006130 ORTHO05D007491 2.2e-96 356.7 386 49.5
EL10Ac6g14758 Beta vulgaris HOM05D006130 ORTHO05D007491 3.7e-96 355.9 377 50.7
Nitab4.5_0015691g0010 Nicotiana tabacum HOM05D006130 ORTHO05D007491 4.9e-96 355.5 370 51.6
Ca_16897_v3 Cicer arietinum L. HOM05D006130 ORTHO05D007491 8.3e-96 354.8 386 49.7
HanXRQChr14g0445741 Helianthus annuus HOM05D006130 ORTHO05D007491 1.4e-95 354.0 355 51.3
Lj1g0022742 Lotus japonicus HOM05D006130 ORTHO05D007491 4.1e-95 352.4 374 50.5
TPR.G23729 Trifolium pratense HOM05D006130 ORTHO05D007491 7.0e-95 351.7 376 50.0
Phvul.009G139000 Phaseolus vulgaris HOM05D006130 ORTHO05D007491 1.6e-94 350.5 374 52.9
THA.LOC104818474 Tarenaya hassleriana HOM05D006130 ORTHO05D007491 1.7e-93 347.1 380 48.7
arahy.Tifrunner.gnm1.ann1.JIC903 Arachis hypogaea HOM05D006130 ORTHO05D007491 2.3e-93 346.7 387 49.1
Nitab4.5_0004840g0040 Nicotiana tabacum HOM05D006130 ORTHO05D007491 2.3e-93 346.7 367 51.0
Eucgr.H04859 Eucalyptus grandis HOM05D006130 ORTHO05D007491 3.9e-93 345.9 358 50.0
AUR62016283 Chenopodium quinoa HOM05D006130 ORTHO05D007491 4.7e-91 339.0 380 47.4
Medtr3g095020 Medicago truncatula HOM05D006130 ORTHO05D007491 4.7e-91 339.0 380 48.9
arahy.Tifrunner.gnm1.ann1.S5QZ0Z Arachis hypogaea HOM05D006130 ORTHO05D007491 1.1e-90 337.8 383 48.0
Psat5g066000 Pisum sativum HOM05D006130 ORTHO05D007491 1.1e-90 337.8 374 48.9
Lsat_1_v5_gn_2_67140 Lactuca sativa HOM05D006130 ORTHO05D007491 5.2e-90 335.5 367 48.0
Lsat_1_v5_gn_2_93681 Lactuca sativa HOM05D006130 ORTHO05D007491 8.9e-90 334.7 367 47.7
AUR62003302 Chenopodium quinoa HOM05D006130 ORTHO05D007491 2.0e-89 333.6 385 47.8
Aa31LG1G17100 Aethionema arabicum HOM05D006130 ORTHO05D007491 5.8e-89 332.0 360 49.7
Migut.L00069 Erythranthe guttata HOM05D006130 ORTHO05D007491 7.5e-89 331.6 372 50.3
Thhalv10004393m.g Eutrema salsugineum HOM05D006130 ORTHO05D007491 2.2e-88 330.1 375 48.0
VMungo1309G1738 Vigna mungo HOM05D006130 ORTHO05D007491 2.2e-88 330.1 342 53.5
Eucgr.H04856 Eucalyptus grandis HOM05D006130 ORTHO05D007491 2.9e-88 329.7 362 48.6
Glyma.04G218800 Glycine max HOM05D006130 ORTHO05D007491 5.4e-87 325.5 370 49.5
TAR628G0645 Trochodendron aralioides HOM05D006130 ORTHO05D007491 1.2e-86 324.3 280 58.2
CDE09G1360 Ceratophyllum demersum HOM05D006130 ORTHO05D007491 2.8e-83 313.2 391 45.8
HPP92_016462 Vanilla planifolia HOM05D006130 ORTHO05D007491 8.1e-83 311.6 367 43.9
Hma1.2p1_0375F.1_g138770 Hydrangea macrophylla HOM05D006130 ORTHO05D007491 1.1e-82 311.2 304 56.2
AL8G42310 Arabidopsis lyrata HOM05D006130 ORTHO05D007491 3.1e-82 309.7 370 44.6
C03p61330 Brassica napus HOM05D006130 ORTHO05D007491 3.1e-82 309.7 381 47.5
ATR0665G503 Amborella trichopoda HOM05D006130 ORTHO05D007491 4.0e-82 309.3 385 45.7
Sp2g27910 Schrenkiella parvula HOM05D006130 ORTHO05D007491 5.2e-82 308.9 372 45.4
BcaC01g02716 Brassica carinata HOM05D006130 ORTHO05D007491 1.2e-81 307.8 380 47.4
Eucgr.H04846 Eucalyptus grandis HOM05D006130 ORTHO05D007491 2.0e-81 307.0 352 46.9
HPP92_027147 Vanilla planifolia HOM05D006130 ORTHO05D007491 2.6e-81 306.6 360 44.7
Carub.0008s2566 Capsella rubella HOM05D006130 ORTHO05D007491 3.4e-81 306.2 363 44.9
CARHR278840 Cardamine hirsuta HOM05D006130 ORTHO05D007491 3.4e-81 306.2 369 45.8
SEGI_25559 Sequoiadendron giganteum HOM05D006130 ORTHO05D007491 1.3e-80 304.3 393 42.5
Actinidia12211 Actinidia chinensis HOM05D006130 ORTHO05D007491 2.2e-80 303.5 259 58.3
SalBow5G2487 Salvia bowleyana HOM05D006130 ORTHO05D007491 2.2e-80 303.5 369 48.0
Zm00001eb431860 Zea mays HOM05D006130 ORTHO05D007491 9.2e-79 298.1 376 45.5
BraA06t26099Z Brassica rapa HOM05D006130 ORTHO05D007491 7.8e-78 295.0 370 45.7
A06p31630 Brassica napus HOM05D006130 ORTHO05D007491 8.6e-77 291.6 375 45.1
Os04g0640800 Oryza sativa ssp. japonica HOM05D006130 ORTHO05D007491 1.9e-76 290.4 373 44.8
BolC3t18393H Brassica oleracea HOM05D006130 ORTHO05D007491 2.5e-76 290.0 367 45.5
SGA_v2.0_scaffold47G17703 Striga asiatica HOM05D006130 ORTHO05D007491 9.6e-76 288.1 380 43.4
GSVIVG01022231001 Vitis vinifera HOM05D006130 ORTHO05D007491 4.7e-75 285.8 380 44.5
BcaB02g09834 Brassica carinata HOM05D006130 ORTHO05D007491 4.0e-74 282.7 375 44.3
SMO358G0378 Selaginella moellendorffii HOM05D006130 ORTHO05D007491 5.2e-74 282.3 397 40.6
Ah.14g080600 Amaranthus hybridus HOM05D006130 ORTHO05D007491 1.1e-71 274.6 359 44.8
Ah.03g141370 Amaranthus hybridus HOM05D006130 ORTHO05D007491 3.2e-71 273.1 283 50.9
unitig_62.g23431 Utricularia gibba HOM05D006130 ORTHO05D007491 1.9e-68 263.8 359 44.3
Sc03g0004370 Simmondsia chinensis HOM05D006130 ORTHO05D007491 2.4e-66 256.9 283 49.5
Mapoly0014s0114 Marchantia polymorpha HOM05D006130 ORTHO05D007491 3.2e-63 246.5 408 37.7
Pp3c16_16240 Physcomitrium patens HOM05D006130 ORTHO05D007491 7.1e-63 245.4 411 36.7
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.4e-57 226.5 175 62.3
AT5G64830 Arabidopsis thaliana HOM05D006130 ORTHO05D007491 5.5e-55 219.2 286 44.4
COL.COLO4_11003 Corchorus olitorius HOM05D006130 ORTHO05D007491 4.6e-54 216.1 375 33.6
Glyma.06G147000 Glycine max HOM05D006130 ORTHO05D007491 1.9e-52 210.7 244 50.4
Eucgr.H04861 Eucalyptus grandis HOM05D006130 ORTHO05D007491 3.7e-51 206.5 175 60.6
CBR_g30690 Chara braunii HOM05D006130 ORTHO05D007491 7.6e-41 172.2 482 29.7
SGA_v2.0_scaffold34G13625 Striga asiatica HOM05D006130 ORTHO05D007491 8.2e-27 125.6 88 63.6
AagrBONN_evm.TU.Sc2ySwM_228.1847 Anthoceros agrestis HOM05D006130 ORTHO05D007491 1.7e-24 117.9 145 43.4
Actinidia35264 Actinidia chinensis HOM05D006130 ORTHO05D007491 2.2e-24 117.5 87 60.9
AagrBONN_evm.TU.Sc2ySwM_228.1848 Anthoceros agrestis HOM05D006130 ORTHO05D007491 7.2e-23 112.5 88 55.7
MCO11G927 Micromonas commoda HOM05D006130 ORTHO05D007491 3.3e-20 103.6 437 26.5
SGA_v2.0_scaffold32G12965 Striga asiatica HOM05D006130 ORTHO05D007491 1.0e-13 82.0 81 51.9
HanXRQChr08g0218711 Helianthus annuus HOM05D006130 ORTHO05D007491 8.2e-11 72.4 53 56.6
DCAR_005781 Daucus carota HOM05D005189 ORTHO05D006093 1.6e-09 68.2 344 24.7
DCAR_006919 Daucus carota HOM05D005189 ORTHO05D006093 7.7e-09 65.9 346 25.1
PGR044G0984 Punica granatum HOM05D005189 ORTHO05D006093 8.5e-08 62.4 330 24.8
PGR047G0002 Punica granatum HOM05D005189 ORTHO05D006093 8.5e-08 62.4 330 24.8
Cre14.g608500 Chlamydomonas reinhardtii HOM05D006130 ORTHO05D007491 1.1e-07 62.0 73 39.7
CSS0031632 Camellia sinensis var. sinensis HOM05D005189 ORTHO05D006093 2.5e-07 60.8 349 22.9
Medtr7g105630 Medicago truncatula HOM05D005189 ORTHO05D006093 2.5e-07 60.8 324 25.6
Oeu028521.1 Olea europaea HOM05D006130 ORTHO05D007491 4.2e-07 60.1 31 77.4
PSO782G1813 Papaver somniferum HOM05D005189 ORTHO05D006093 6.1e-06 56.2 321 25.5
CSS0046497 Camellia sinensis var. sinensis HOM05D005189 ORTHO05D006093 8.0e-06 55.8 340 21.8
TPR.G23365 Trifolium pratense HOM05D005189 ORTHO05D006093 8.0e-06 55.8 329 24.9


User provided reference genes

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