Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G2109 Fragaria x ananassa HOM05D005928 ORTHO05D007500 3.2e-33 144.4 69 100.0
FvH4_7g25610 Fragaria vesca HOM05D005928 ORTHO05D007500 2.4e-25 118.2 58 94.8
FAN01G2489 Fragaria x ananassa HOM05D005928 ORTHO05D007500 2.4e-25 118.2 58 94.8
FAN03G1156 Fragaria x ananassa HOM05D005928 ORTHO05D007500 2.4e-25 118.2 58 94.8
FAN06G2388 Fragaria x ananassa HOM05D005928 ORTHO05D007500 2.4e-25 118.2 58 94.8
FAN10G3250 Fragaria x ananassa HOM05D005928 ORTHO05D007500 2.4e-25 118.2 58 94.8
Prupe.2G261400 Prunus persica HOM05D005928 ORTHO05D007500 3.2e-25 117.9 58 93.1
RcHm_v2.0_Chr1g0371751 Rosa chinensis HOM05D005928 ORTHO05D007500 7.1e-25 116.7 58 93.1
MD01G1163400 Malus domestica HOM05D005928 ORTHO05D007500 9.2e-25 116.3 58 91.4
CiPaw.02G198000 Carya illinoinensis HOM05D005928 ORTHO05D007500 1.2e-24 115.9 58 91.4
Cc02_g05580 Coffea canephora HOM05D005928 ORTHO05D007500 1.2e-24 115.9 58 91.4
HanXRQChr17g0560781 Helianthus annuus HOM05D005928 ORTHO05D007500 2.1e-24 115.2 61 85.2
MD07G1231400 Malus domestica HOM05D005928 ORTHO05D007500 2.1e-24 115.2 58 89.7
Atru.chr12.150 Acer truncatum HOM05D005928 ORTHO05D007500 2.7e-24 114.8 64 81.2
ClCG07G004890 Citrullus lanatus HOM05D005928 ORTHO05D007500 2.7e-24 114.8 58 87.9
Eucgr.G03124 Eucalyptus grandis HOM05D005928 ORTHO05D007500 2.7e-24 114.8 64 84.4
Sed0018034 Sechium edule HOM05D005928 ORTHO05D007500 2.7e-24 114.8 59 86.4
CSS0005641 Camellia sinensis var. sinensis HOM05D005928 ORTHO05D007500 3.5e-24 114.4 58 89.7
CSS0024669 Camellia sinensis var. sinensis HOM05D005928 ORTHO05D007500 3.5e-24 114.4 58 89.7
Dinv21825 Davidia involucrata HOM05D005928 ORTHO05D007500 3.5e-24 114.4 58 89.7
ECA233G3100 Erigeron canadensis HOM05D005928 ORTHO05D007500 3.5e-24 114.4 58 89.7
HanXRQChr08g0222551 Helianthus annuus HOM05D005928 ORTHO05D007500 3.5e-24 114.4 58 89.7
Hma1.2p1_0292F.1_g115770 Hydrangea macrophylla HOM05D005928 ORTHO05D007500 3.5e-24 114.4 58 89.7
Hma1.2p1_0292F.1_g115780 Hydrangea macrophylla HOM05D005928 ORTHO05D007500 3.5e-24 114.4 58 89.7
Lsat_1_v5_gn_8_13460 Lactuca sativa HOM05D005928 ORTHO05D007500 3.5e-24 114.4 58 89.7
PSO017G6961 Papaver somniferum HOM05D005928 ORTHO05D007500 4.6e-24 114.0 58 89.7
Cfa001227 Carpinus fangiana HOM05D005928 ORTHO05D007500 6.0e-24 113.6 63 82.5
CiPaw.01G304700 Carya illinoinensis HOM05D005928 ORTHO05D007500 6.0e-24 113.6 58 86.2
Ca_15187_v3 Cicer arietinum L. HOM05D005928 ORTHO05D007500 6.0e-24 113.6 61 83.6
Haze_17335 Corylus avellana HOM05D005928 ORTHO05D007500 6.0e-24 113.6 63 82.5
MELO3C020118.2 Cucumis melo HOM05D005928 ORTHO05D007500 6.0e-24 113.6 57 89.5
CsaV3_5G010790 Cucumis sativus L. HOM05D005928 ORTHO05D007500 6.0e-24 113.6 57 89.5
PSO170G4626 Papaver somniferum HOM05D005928 ORTHO05D007500 6.0e-24 113.6 58 87.9
PGR142G0245 Punica granatum HOM05D005928 ORTHO05D007500 7.8e-24 113.2 58 91.4
Cpa.g.sc19.87 Carica papaya HOM05D005928 ORTHO05D007500 1.0e-23 112.8 58 89.7
Oeu040824.1 Olea europaea HOM05D005928 ORTHO05D007500 1.3e-23 112.5 59 88.1
QL08p064521 Quercus lobata HOM05D005928 ORTHO05D007500 1.3e-23 112.5 58 87.9
MSTRG.27277 Avicennia marina HOM05D005928 ORTHO05D007500 1.7e-23 112.1 57 87.7
Migut.F00589 Erythranthe guttata HOM05D005928 ORTHO05D007500 1.7e-23 112.1 57 87.7
Lj8C57T12 Lonicera japonica HOM05D005928 ORTHO05D007500 1.7e-23 112.1 58 87.9
Manes.07G138100 Manihot esculenta HOM05D005928 ORTHO05D007500 1.7e-23 112.1 58 89.7
CANSAT56G3104 Cannabis sativa HOM05D005928 ORTHO05D007500 3.0e-23 111.3 58 87.9
MBI15_g22073_MAGBIO Magnolia biondii HOM05D005928 ORTHO05D007500 3.9e-23 110.9 64 78.1
Nn2g10360 Nelumbo nucifera HOM05D005928 ORTHO05D007500 3.9e-23 110.9 58 86.2
SGA_v2.0_scaffold60G20910 Striga asiatica HOM05D005928 ORTHO05D007500 3.9e-23 110.9 57 86.0
CDE04G0773 Ceratophyllum demersum HOM05D005928 ORTHO05D007500 5.1e-23 110.5 64 78.1
CDE06G0652 Ceratophyllum demersum HOM05D005928 ORTHO05D007500 5.1e-23 110.5 64 78.1
Sabra19G0058500 Salix brachista HOM05D005928 ORTHO05D007500 5.1e-23 110.5 64 82.8
Actinidia07803 Actinidia chinensis HOM05D005928 ORTHO05D007500 6.6e-23 110.2 59 83.1
TWI73G0552 Tripterygium wilfordii HOM05D005928 ORTHO05D007500 6.6e-23 110.2 58 86.2
EL10Ac2g04264 Beta vulgaris HOM05D005928 ORTHO05D007500 8.6e-23 109.8 58 86.2
Ca_15186_v3 Cicer arietinum L. HOM05D005928 ORTHO05D007500 1.1e-22 109.4 58 84.5
COL.COLO4_26867 Corchorus olitorius HOM05D005928 ORTHO05D007500 1.1e-22 109.4 58 86.2
Gohir.A05G279700 Gossypium hirsutum HOM05D005928 ORTHO05D007500 1.1e-22 109.4 60 83.3
Gohir.D05G281300 Gossypium hirsutum HOM05D005928 ORTHO05D007500 1.1e-22 109.4 60 83.3
Gorai.009G294700 Gossypium raimondii HOM05D005928 ORTHO05D007500 1.1e-22 109.4 60 83.3
Sc11g0005710 Simmondsia chinensis HOM05D005928 ORTHO05D007500 1.1e-22 109.4 58 86.2
Thecc.10G175200 Theobroma cacao HOM05D005928 ORTHO05D007500 1.1e-22 109.4 58 86.2
vmacro09978 Vaccinium macrocarpon HOM05D005928 ORTHO05D007500 1.1e-22 109.4 58 84.5
Lalb_Chr23g0277221 Lupinus albus HOM05D005928 ORTHO05D007500 1.5e-22 109.0 58 84.5
Peaxi162Scf00464g00016 Petunia axillaris HOM05D005928 ORTHO05D007500 1.5e-22 109.0 58 86.2
Hund13473 Selenicereus undatus HOM05D005928 ORTHO05D007500 1.5e-22 109.0 58 86.2
THA.LOC104823175 Tarenaya hassleriana HOM05D005928 ORTHO05D007500 1.5e-22 109.0 58 86.2
THA.LOC104826835 Tarenaya hassleriana HOM05D005928 ORTHO05D007500 1.5e-22 109.0 58 86.2
TAR633G2075 Trochodendron aralioides HOM05D005928 ORTHO05D007500 1.5e-22 109.0 58 86.2
CAN.G251.1 Capsicum annuum HOM05D005928 ORTHO05D007500 1.9e-22 108.6 58 86.2
Solyc06g050310.3 Solanum lycopersicum HOM05D005928 ORTHO05D007500 1.9e-22 108.6 58 86.2
Sopen06g015810 Solanum pennellii HOM05D005928 ORTHO05D007500 1.9e-22 108.6 58 86.2
Nitab4.5_0000263g0260 Nicotiana tabacum HOM05D005928 ORTHO05D007500 2.5e-22 108.2 58 86.2
Nitab4.5_0002713g0050 Nicotiana tabacum HOM05D005928 ORTHO05D007500 2.5e-22 108.2 58 86.2
Rhsim09G0183900 Rhododendron simsii HOM05D005928 ORTHO05D007500 2.5e-22 108.2 58 82.8
Ah.16g104190 Amaranthus hybridus HOM05D005928 ORTHO05D007500 3.3e-22 107.8 58 84.5
arahy.Tifrunner.gnm1.ann1.S9XQPV Arachis hypogaea HOM05D005928 ORTHO05D007500 3.3e-22 107.8 58 82.8
arahy.Tifrunner.gnm1.ann1.SGI3UP Arachis hypogaea HOM05D005928 ORTHO05D007500 3.3e-22 107.8 58 82.8
Glyma.11G235500 Glycine max HOM05D005928 ORTHO05D007500 3.3e-22 107.8 58 82.8
Glyma.18G021400 Glycine max HOM05D005928 ORTHO05D007500 3.3e-22 107.8 58 82.8
Lj6g0027393 Lotus japonicus HOM05D005928 ORTHO05D007500 3.3e-22 107.8 58 82.8
GSVIVG01032711001 Vitis vinifera HOM05D005928 ORTHO05D007500 3.3e-22 107.8 64 78.1
Aa31LG3G4180 Aethionema arabicum HOM05D005928 ORTHO05D007500 4.3e-22 107.5 58 82.8
ATR0681G120 Amborella trichopoda HOM05D005928 ORTHO05D007500 4.3e-22 107.5 59 83.1
AL3G22510 Arabidopsis lyrata HOM05D005928 ORTHO05D007500 4.3e-22 107.5 64 76.6
AT3G10970 Arabidopsis thaliana HOM05D005928 ORTHO05D007500 4.3e-22 107.5 64 76.6
BcaC05g29416 Brassica carinata HOM05D005928 ORTHO05D007500 4.3e-22 107.5 64 76.6
A05p38280 Brassica napus HOM05D005928 ORTHO05D007500 4.3e-22 107.5 64 76.6
C05p57100 Brassica napus HOM05D005928 ORTHO05D007500 4.3e-22 107.5 64 76.6
BraA05t22620Z Brassica rapa HOM05D005928 ORTHO05D007500 4.3e-22 107.5 64 76.6
Thhalv10020975m.g Eutrema salsugineum HOM05D005928 ORTHO05D007500 4.3e-22 107.5 64 76.6
Manes.10G005400 Manihot esculenta HOM05D005928 ORTHO05D007500 4.3e-22 107.5 58 86.2
Sp3g09300 Schrenkiella parvula HOM05D005928 ORTHO05D007500 4.3e-22 107.5 64 76.6
HanXRQChr06g0167361 Helianthus annuus HOM05D005928 ORTHO05D007500 5.6e-22 107.1 59 83.1
Medtr3g072340 Medicago truncatula HOM05D005928 ORTHO05D007500 5.6e-22 107.1 58 82.8
SalBow3G0966 Salvia bowleyana HOM05D005928 ORTHO05D007500 5.6e-22 107.1 56 85.7
TPR.G31620 Trifolium pratense HOM05D005928 ORTHO05D007500 5.6e-22 107.1 58 82.8
BcaB06g25666 Brassica carinata HOM05D005928 ORTHO05D007500 7.3e-22 106.7 58 82.8
BolC5t34373H Brassica oleracea HOM05D005928 ORTHO05D007500 7.3e-22 106.7 58 82.8
CARHR085550 Cardamine hirsuta HOM05D005928 ORTHO05D007500 7.3e-22 106.7 58 82.8
Potri.019G049000 Populus trichocarpa HOM05D005928 ORTHO05D007500 7.3e-22 106.7 64 76.6
Ciclev10031841m.g Citrus clementina HOM05D005928 ORTHO05D007500 9.6e-22 106.3 57 86.0
DCAR_019810 Daucus carota HOM05D005928 ORTHO05D007500 1.2e-21 105.9 63 76.2
VMungo1383G3668 Vigna mungo HOM05D005928 ORTHO05D007500 1.2e-21 105.9 58 81.0
Phvul.001G248900 Phaseolus vulgaris HOM05D005928 ORTHO05D007500 3.6e-21 104.4 57 80.7
HPP92_025120 Vanilla planifolia HOM05D005928 ORTHO05D007500 3.6e-21 104.4 64 73.4
Carub.0003s1024 Capsella rubella HOM05D005928 ORTHO05D007500 4.7e-21 104.0 58 81.0
Lalb_Chr08g0231321 Lupinus albus HOM05D005928 ORTHO05D007500 4.7e-21 104.0 58 79.3
Psat5g131560 Pisum sativum HOM05D005928 ORTHO05D007500 4.7e-21 104.0 58 81.0
Aqoxy4G02353 Aquilegia oxysepala HOM05D005928 ORTHO05D007500 6.2e-21 103.6 57 80.7
SEGI_10893 Sequoiadendron giganteum HOM05D005928 ORTHO05D007500 2.4e-20 101.7 64 70.3
Zm00001eb282030 Zea mays HOM05D005928 ORTHO05D007500 2.4e-20 101.7 64 71.9
Os05g0168300 Oryza sativa ssp. japonica HOM05D005928 ORTHO05D007500 8.9e-20 99.8 64 71.9
AagrBONN_evm.TU.Sc2ySwM_117.3104 Anthoceros agrestis HOM05D005928 ORTHO05D007500 1.7e-18 95.5 58 74.1
Mapoly0051s0069 Marchantia polymorpha HOM05D005928 ORTHO05D007500 8.4e-18 93.2 58 70.7
COL.COLO4_00092 Corchorus olitorius HOM05D005928 ORTHO05D007500 1.4e-17 92.4 58 77.6
Pp3c1_33360 Physcomitrium patens HOM05D005928 ORTHO05D007500 1.9e-17 92.0 60 68.3
SMO117G0217 Selaginella moellendorffii HOM05D005928 ORTHO05D007500 7.1e-17 90.1 63 61.9
Duzib187G1301 Durio zibethinus HOM05D005928 ORTHO05D019098 7.8e-16 86.7 50 74.0
PSO170G0859 Papaver somniferum HOM05D005928 ORTHO05D007500 2.9e-10 68.2 58 56.9
Sed0024675 Sechium edule HOM05D005928 ORTHO05D007500 2.4e-09 65.1 34 85.3
Cre08.g360801 Chlamydomonas reinhardtii HOM05D005928 ORTHO05D007500 1.2e-08 62.8 65 43.1


User provided reference genes

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