Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G1940 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.6e-135 485.0 250 100.0
FAN28G0350 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.8e-31 139.0 101 70.3
FvH4_1g05120 Fragaria vesca HOM05D002813 ORTHO05D003203 3.5e-29 132.9 94 72.3
FAN19G0454 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.5e-29 132.9 94 72.3
FAN24G2117 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.5e-27 125.6 171 47.4
FvH4_2g32530 Fragaria vesca HOM05D002813 ORTHO05D003203 1.2e-26 124.4 124 55.6
FAN27G1770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.0e-26 121.7 124 54.8
FAN27G2375 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-25 121.3 253 35.2
FvH4_2g32540 Fragaria vesca HOM05D002813 ORTHO05D003203 3.0e-25 119.8 101 60.4
FAN24G1750 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.0e-25 119.8 101 60.4
FAN28G0547 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.0e-24 117.1 56 91.1
FAN20G1781 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.4e-24 115.9 124 54.0
FvH4_2g32630 Fragaria vesca HOM05D002813 ORTHO05D003203 6.3e-23 112.1 123 49.6
FAN24G2983 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.3e-23 112.1 123 49.6
FvH4_2g32520 Fragaria vesca HOM05D002813 ORTHO05D003203 1.4e-22 110.9 101 56.4
FvH4_2g32610 Fragaria vesca HOM05D002813 ORTHO05D003203 2.4e-22 110.2 95 60.0
FvH4_2g32590 Fragaria vesca HOM05D002813 ORTHO05D003203 1.6e-21 107.5 93 60.2
FAN15G1401 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.6e-21 107.5 92 60.9
FAN24G0821 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.6e-21 107.5 93 60.2
FAN20G2689 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.5e-21 106.3 68 75.0
FAN20G2926 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.2e-20 103.6 88 62.5
RcHm_v2.0_Chr2g0157391 Rosa chinensis HOM05D002813 ORTHO05D003203 1.8e-17 94.0 92 51.1
FAN15G1989 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.3e-17 93.6 95 57.9
RcHm_v2.0_Chr6g0307031 Rosa chinensis HOM05D002813 ORTHO05D003203 3.0e-17 93.2 87 48.3
FAN21G1333 Fragaria x ananassa HOM05D000259 ORTHO05D008185 6.8e-17 92.0 100 45.0
FAN20G2873 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-16 90.9 91 49.5
FAN27G0414 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.0e-16 90.5 92 45.7
FvH4_6g41671 Fragaria vesca HOM05D002813 ORTHO05D003203 2.6e-16 90.1 90 48.9
FAN15G1653 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-15 87.4 91 48.4
FAN27G2509 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-15 87.4 91 48.4
FvH4_2g34980 Fragaria vesca HOM05D002813 ORTHO05D003203 2.2e-15 87.0 91 48.4
FvH4_2g34990 Fragaria vesca HOM05D002813 ORTHO05D003203 2.2e-15 87.0 92 44.6
FAN15G3400 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.2e-15 87.0 92 44.6
FAN20G0435 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.2e-15 87.0 92 44.6
FAN02G4465 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.8e-15 85.9 89 48.3
QL12p041348 Quercus lobata HOM05D002813 ORTHO05D003203 6.3e-15 85.5 93 46.2
TAR626G1934 Trochodendron aralioides HOM05D002813 ORTHO05D003203 8.3e-15 85.1 88 44.3
FvH4_5g19260 Fragaria vesca HOM05D002813 ORTHO05D003203 1.8e-14 84.0 87 49.4
FAN18G2037 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-14 84.0 87 49.4
RcHm_v2.0_Chr6g0307021 Rosa chinensis HOM05D002813 ORTHO05D003203 1.8e-14 84.0 92 43.5
Prupe.1G448200 Prunus persica HOM05D002813 ORTHO05D003203 2.4e-14 83.6 91 45.1
QL12p041358 Quercus lobata HOM05D002813 ORTHO05D003203 2.4e-14 83.6 98 45.9
MD15G1093400 Malus domestica HOM05D002813 ORTHO05D003203 3.1e-14 83.2 91 45.1
FAN09G1972 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.4e-14 82.4 86 45.3
FAN02G3770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.0e-14 82.0 110 39.1
FAN05G0887 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.0e-14 82.0 107 40.2
FAN14G0433 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.0e-14 82.0 110 38.2
GSVIVG01035624001 Vitis vinifera HOM05D002813 ORTHO05D003203 7.0e-14 82.0 102 41.2
FvH4_6g15310 Fragaria vesca HOM05D002813 ORTHO05D003203 9.1e-14 81.6 110 38.2
FvH4_2g32600 Fragaria vesca HOM05D002813 ORTHO05D003203 1.6e-13 80.9 58 69.0
FAN04G1304 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.0e-13 80.5 85 48.2
Nn2g11622 Nelumbo nucifera HOM05D002813 ORTHO05D003203 2.0e-13 80.5 91 42.9
FAN06G5037 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.7e-13 80.1 94 42.6
RcHm_v2.0_Chr6g0306251 Rosa chinensis HOM05D002813 ORTHO05D003203 4.5e-13 79.3 83 42.2
FAN10G3663 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.9e-13 79.0 95 41.1
SGA_v2.0_scaffold103G30003 Striga asiatica HOM05D002813 ORTHO05D003203 5.9e-13 79.0 110 36.4
FvH4_2g35530 Fragaria vesca HOM05D002813 ORTHO05D003203 7.7e-13 78.6 92 41.3
FAN01G0062 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.7e-13 78.6 92 43.5
FAN09G1014 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.7e-13 78.6 110 37.3
FAN17G1816 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.7e-13 78.6 76 50.0
FAN27G3388 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.7e-13 78.6 92 41.3
Mapoly0100s0050 Marchantia polymorpha HOM05D002813 ORTHO05D003203 7.7e-13 78.6 90 41.1
FAN10G2587 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-12 78.2 92 43.5
FAN10G3741 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-12 78.2 92 43.5
FAN06G1567 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-12 77.4 93 46.2
FAN06G4596 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.3e-12 77.0 93 41.9
FAN03G2494 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.8e-12 76.3 111 37.8
Nitab4.5_0028416g0010 Nicotiana tabacum HOM05D002813 ORTHO05D003203 3.8e-12 76.3 90 38.9
QL12p041353 Quercus lobata HOM05D002813 ORTHO05D003203 3.8e-12 76.3 92 45.7
SEGI_38686 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 3.8e-12 76.3 112 40.2
CiPaw.07G204200 Carya illinoinensis HOM05D002813 ORTHO05D003203 5.0e-12 75.9 101 40.6
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 6.5e-12 75.5 91 42.9
FvH4_6g07350 Fragaria vesca HOM05D002813 ORTHO05D003203 6.5e-12 75.5 86 43.0
CiPaw.16G053300 Carya illinoinensis HOM05D002813 ORTHO05D003203 1.1e-11 74.7 92 41.3
Potri.006G238300 Populus trichocarpa HOM05D002813 ORTHO05D003203 1.1e-11 74.7 97 37.1
FvH4_2g35000 Fragaria vesca HOM05D002813 ORTHO05D003203 1.9e-11 73.9 91 42.9
Nitab4.5_0003794g0040 Nicotiana tabacum HOM05D002813 ORTHO05D003203 1.9e-11 73.9 91 40.7
FAN14G4978 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.5e-11 73.6 99 38.4
FvH4_6g11570 Fragaria vesca HOM05D002813 ORTHO05D003203 3.2e-11 73.2 86 40.7
FAN14G1246 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.2e-11 73.2 86 40.7
Peaxi162Scf00227g00722 Petunia axillaris HOM05D002813 ORTHO05D003203 3.2e-11 73.2 91 39.6
FAN04G1781 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.2e-11 72.8 89 42.7
Duzib168G2404 Durio zibethinus HOM05D002813 ORTHO05D003203 5.5e-11 72.4 91 40.7
FAN05G4830 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.5e-11 72.4 86 40.7
FAN15G0916 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.5e-11 72.4 93 40.9
PGSC0003DMG400002228 Solanum tuberosum HOM05D002813 ORTHO05D003203 5.5e-11 72.4 91 37.4
FvH4_5g12160 Fragaria vesca HOM05D002813 ORTHO05D003203 7.2e-11 72.0 88 45.5
FvH4_6g06400 Fragaria vesca HOM05D002813 ORTHO05D003203 7.2e-11 72.0 99 38.4
FAN04G2105 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.2e-11 72.0 88 45.5
FAN05G2846 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.5e-11 71.6 98 38.8
FAN11G2625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.5e-11 71.6 69 52.2
FAN14G2467 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.5e-11 71.6 86 40.7
Eucgr.C02935 Eucalyptus grandis HOM05D002813 ORTHO05D003203 1.2e-10 71.2 105 40.0
FAN13G2791 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-10 71.2 88 45.5
FAN18G0957 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-10 71.2 87 42.5
Gohir.D05G048500 Gossypium hirsutum HOM05D002813 ORTHO05D003203 1.2e-10 71.2 91 41.8
RcHm_v2.0_Chr6g0307011 Rosa chinensis HOM05D002813 ORTHO05D003203 1.2e-10 71.2 73 47.9
FvH4_5g12200 Fragaria vesca HOM05D002813 ORTHO05D003203 1.6e-10 70.9 87 41.4
MSTRG.9106 Avicennia marina HOM05D002813 ORTHO05D003203 2.1e-10 70.5 91 37.4
Gorai.009G049800 Gossypium raimondii HOM05D002813 ORTHO05D003203 2.1e-10 70.5 91 40.7
RcHm_v2.0_Chr6g0306231 Rosa chinensis HOM05D002813 ORTHO05D003203 2.1e-10 70.5 88 42.0
Sc23g0005220 Simmondsia chinensis HOM05D002813 ORTHO05D003203 2.1e-10 70.5 89 37.1
Thecc.09G045300 Theobroma cacao HOM05D002813 ORTHO05D003203 2.1e-10 70.5 91 40.7
FAN27G1144 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.8e-10 70.1 93 39.8
Cc08_g09560 Coffea canephora HOM05D002813 ORTHO05D003203 3.6e-10 69.7 90 37.8
FAN18G4406 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.6e-10 69.7 89 41.6
FAN25G2065 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.6e-10 69.7 82 46.3
FAN08G1174 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.7e-10 69.3 88 44.3
Gohir.A05G046700 Gossypium hirsutum HOM05D002813 ORTHO05D003203 4.7e-10 69.3 91 40.7
Manes.16G075500 Manihot esculenta HOM05D002813 ORTHO05D003203 4.7e-10 69.3 91 40.7
Solyc08g066630.2 Solanum lycopersicum HOM05D002813 ORTHO05D003203 4.7e-10 69.3 91 36.3
Sopen08g020490 Solanum pennellii HOM05D002813 ORTHO05D003203 4.7e-10 69.3 91 36.3
FvH4_3g21760 Fragaria vesca HOM05D002813 ORTHO05D003203 1.0e-09 68.2 108 38.0
RcHm_v2.0_Chr7g0185401 Rosa chinensis HOM05D002813 ORTHO05D003203 1.0e-09 68.2 96 38.5
FvH4_2g37241 Fragaria vesca HOM05D002813 ORTHO05D003203 1.4e-09 67.8 69 49.3
FAN27G1742 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.3e-09 67.0 69 49.3
FAN15G2356 Fragaria x ananassa HOM05D002813 ORTHO05D000003 3.0e-09 66.6 69 49.3
SEGI_37199 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 3.0e-09 66.6 91 37.4
Ciclev10010367m.g Citrus clementina HOM05D002813 ORTHO05D003203 4.0e-09 66.2 111 31.5
FvH4_5g12210 Fragaria vesca HOM05D002813 ORTHO05D003203 5.2e-09 65.9 89 39.3
FAN20G1057 Fragaria x ananassa HOM05D002813 ORTHO05D000003 5.2e-09 65.9 67 49.3
FAN04G1334 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.8e-09 65.1 89 38.2
FAN18G2625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.8e-09 65.1 89 38.2
FAN18G2715 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.8e-09 65.1 89 38.2
FAN04G3192 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-08 64.7 89 39.3
FAN21G0510 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-08 64.3 70 51.4
FvH4_3g40700 Fragaria vesca HOM05D002813 ORTHO05D003203 2.0e-08 63.9 92 41.3
FAN16G0815 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.0e-08 63.9 92 40.2
FAN18G3569 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.0e-08 63.9 88 38.6
FAN18G3812 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.0e-08 63.9 88 38.6
FAN25G3196 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.0e-08 63.9 69 46.4
Atru.chr7.2088 Acer truncatum HOM05D002813 ORTHO05D003203 2.6e-08 63.5 91 37.4
FAN11G0908 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.6e-08 63.5 92 40.2
ATR0705G192 Amborella trichopoda HOM05D002813 ORTHO05D003203 3.4e-08 63.2 90 40.0
FAN16G2005 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.7e-08 62.4 109 37.6
FvH4_3g11250 Fragaria vesca HOM05D002813 ORTHO05D003203 7.5e-08 62.0 70 50.0
FvH4_6g10172 Fragaria vesca HOM05D002813 ORTHO05D003203 1.3e-07 61.2 64 43.8
FAN25G1955 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-07 60.8 92 39.1
FAN03G3314 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.2e-07 60.5 55 50.9
FAN06G1078 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.2e-07 60.5 55 50.9
FAN06G3025 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.2e-07 60.5 55 50.9
Lsat_1_v5_gn_6_23140 Lactuca sativa HOM05D002813 ORTHO05D003203 2.2e-07 60.5 91 37.4
FAN17G0649 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.7e-07 59.7 66 47.0
FvH4_2g32511 Fragaria vesca HOM05D002813 ORTHO05D003203 1.4e-06 57.8 50 54.0
FAN14G4337 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-06 57.8 60 43.3
FAN18G0945 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-06 57.8 73 41.1
FvH4_7g20381 Fragaria vesca HOM05D002813 ORTHO05D003203 1.8e-06 57.4 52 50.0
RcHm_v2.0_Chr5g0073471 Rosa chinensis HOM05D002813 ORTHO05D003203 3.1e-06 56.6 90 35.6
FvH4_5g12180 Fragaria vesca HOM05D002813 ORTHO05D003203 7.0e-06 55.5 64 43.8
FAN08G0212 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.2e-06 55.1 63 47.6


User provided reference genes

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