Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G1905 Fragaria x ananassa HOM05D007927 ORTHO05D010029 4.1e-148 528.1 280 100.0
FAN28G0845 Fragaria x ananassa HOM05D007927 ORTHO05D010029 4.3e-105 385.2 284 78.5
FvH4_1g24440 Fragaria vesca HOM05D007927 ORTHO05D010029 3.7e-104 382.1 288 77.1
FAN19G2953 Fragaria x ananassa HOM05D007927 ORTHO05D010029 4.8e-104 381.7 289 76.8
FAN23G1573 Fragaria x ananassa HOM05D007927 ORTHO05D010029 2.4e-103 379.4 269 80.3
RcHm_v2.0_Chr2g0121541 Rosa chinensis HOM05D007927 ORTHO05D010029 1.2e-94 350.5 280 72.9
Prupe.4G271700 Prunus persica HOM05D007927 ORTHO05D010029 1.1e-81 307.4 290 63.1
MD01G1005400 Malus domestica HOM05D007927 ORTHO05D010029 3.3e-81 305.8 291 64.3
CiPaw.04G081700 Carya illinoinensis HOM05D007927 ORTHO05D010029 1.2e-70 270.8 287 57.8
CsaV3_2G019410 Cucumis sativus L. HOM05D007927 ORTHO05D010029 2.0e-70 270.0 280 59.3
Haze_25255 Corylus avellana HOM05D007927 ORTHO05D010029 2.2e-69 266.5 286 58.4
QL10p043457 Quercus lobata HOM05D007927 ORTHO05D010029 3.8e-69 265.8 297 56.9
ClCG02G000450 Citrullus lanatus HOM05D007927 ORTHO05D010029 4.2e-68 262.3 288 57.3
Ciclev10002360m.g Citrus clementina HOM05D007927 ORTHO05D010029 1.2e-67 260.8 281 54.4
Thecc.01G133600 Theobroma cacao HOM05D007927 ORTHO05D010029 8.0e-67 258.1 290 54.8
Atru.chr4.915 Acer truncatum HOM05D007927 ORTHO05D010029 1.0e-66 257.7 282 56.7
PGR102G3035 Punica granatum HOM05D007927 ORTHO05D010029 1.0e-66 257.7 287 56.1
COL.COLO4_35756 Corchorus olitorius HOM05D007927 ORTHO05D010029 3.4e-65 252.7 288 54.9
TWI75G1488 Tripterygium wilfordii HOM05D007927 ORTHO05D010029 3.4e-65 252.7 280 55.4
TAR628G1503 Trochodendron aralioides HOM05D007927 ORTHO05D010029 4.4e-65 252.3 283 54.1
Duzib264G0901 Durio zibethinus HOM05D007927 ORTHO05D010029 5.7e-65 251.9 293 53.2
Manes.13G085601 Manihot esculenta HOM05D007927 ORTHO05D010029 4.1e-63 245.7 289 54.3
Hma1.2p1_0476F.1_g160770 Hydrangea macrophylla HOM05D007927 ORTHO05D010029 7.0e-63 245.0 286 52.8
Dinv24372 Davidia involucrata HOM05D007927 ORTHO05D010029 2.7e-62 243.0 287 51.6
Cpa.g.sc42.162 Carica papaya HOM05D007927 ORTHO05D010029 7.7e-62 241.5 277 52.7
Eucgr.J01289 Eucalyptus grandis HOM05D007927 ORTHO05D010029 2.2e-61 240.0 283 54.1
Nn1g06275 Nelumbo nucifera HOM05D007927 ORTHO05D010029 3.8e-61 239.2 285 53.7
Potri.005G063600 Populus trichocarpa HOM05D007927 ORTHO05D010029 5.0e-61 238.8 283 52.3
Lj4g0020524 Lotus japonicus HOM05D007927 ORTHO05D010029 6.5e-61 238.4 288 52.1
Aqoxy5G02324 Aquilegia oxysepala HOM05D007927 ORTHO05D010029 8.5e-61 238.0 278 52.9
Gohir.D09G003800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 2.5e-60 236.5 285 52.3
Dinv07117 Davidia involucrata HOM05D007927 ORTHO05D010029 3.2e-60 236.1 292 50.0
Glyma.05G191900 Glycine max HOM05D007927 ORTHO05D010029 3.2e-60 236.1 289 51.6
Phvul.002G272300 Phaseolus vulgaris HOM05D007927 ORTHO05D010029 1.2e-59 234.2 254 55.1
VMungo0251G0724 Vigna mungo HOM05D007927 ORTHO05D010029 1.2e-59 234.2 291 51.2
Rhsim08G0002700 Rhododendron simsii HOM05D007927 ORTHO05D010029 1.6e-59 233.8 292 51.0
TPR.G37352 Trifolium pratense HOM05D007927 ORTHO05D010029 1.6e-59 233.8 291 52.2
Psat7g045960 Pisum sativum HOM05D007927 ORTHO05D010029 3.6e-59 232.6 287 52.6
Gohir.A09G004300 Gossypium hirsutum HOM05D007927 ORTHO05D010029 8.0e-59 231.5 289 52.2
Medtr8g093750 Medicago truncatula HOM05D007927 ORTHO05D010029 2.3e-58 229.9 284 50.7
Lsat_1_v5_gn_5_69000 Lactuca sativa HOM05D007927 ORTHO05D010029 3.0e-58 229.6 285 50.5
GSVIVG01026475001 Vitis vinifera HOM05D007927 ORTHO05D010029 3.0e-58 229.6 283 50.5
MBI03_g42544_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 5.2e-58 228.8 287 51.9
MBI03_g37385_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 8.8e-58 228.0 283 51.2
vmacro18670 Vaccinium macrocarpon HOM05D007927 ORTHO05D010029 8.8e-58 228.0 292 50.0
CSS0028810 Camellia sinensis var. sinensis HOM05D007927 ORTHO05D010029 3.4e-57 226.1 295 51.2
DCAR_014334 Daucus carota HOM05D007927 ORTHO05D010029 3.4e-57 226.1 241 53.5
Cfa002902 Carpinus fangiana HOM05D007927 ORTHO05D001116 5.7e-57 225.3 208 60.1
Ca_17635_v3 Cicer arietinum L. HOM05D007927 ORTHO05D010029 2.2e-56 223.4 207 58.9
Actinidia01389 Actinidia chinensis HOM05D007927 ORTHO05D010029 3.7e-56 222.6 292 50.0
Lj4A837T13 Lonicera japonica HOM05D007927 ORTHO05D010029 1.1e-55 221.1 276 50.4
HanXRQChr12g0380561 Helianthus annuus HOM05D007927 ORTHO05D010029 4.1e-55 219.2 291 49.5
Lalb_Chr07g0184391 Lupinus albus HOM05D007927 ORTHO05D010029 2.0e-54 216.9 278 49.3
Gorai.006G005200 Gossypium raimondii HOM05D007927 ORTHO05D010029 7.7e-54 214.9 277 49.5
MELO3C023232.2 Cucumis melo HOM05D007927 ORTHO05D010029 5.0e-53 212.2 263 54.0
CDE02G1961 Ceratophyllum demersum HOM05D007927 ORTHO05D010029 8.6e-53 211.5 244 51.2
FAN19G2631 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.9e-52 210.3 214 64.0
ATR0584G243 Amborella trichopoda HOM05D007927 ORTHO05D010029 2.5e-52 209.9 278 47.1
Os12g0189700 Oryza sativa ssp. japonica HOM05D007927 ORTHO05D010029 4.2e-52 209.1 211 54.0
ECA233G3055 Erigeron canadensis HOM05D007927 ORTHO05D010029 5.5e-52 208.8 293 46.4
SEGI_35752 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 8.6e-45 184.9 274 44.2
Pp3c24_20210 Physcomitrium patens HOM05D007927 ORTHO05D010029 5.6e-44 182.2 237 45.6
Sabra07G0086100 Salix brachista HOM05D007927 ORTHO05D010029 4.0e-42 176.0 100 82.0
Sabra05G0052800 Salix brachista HOM05D007927 ORTHO05D010029 6.8e-42 175.3 251 49.0
FAN23G0137 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.5e-41 174.1 179 60.3
AagrBONN_evm.TU.Sc2ySwM_344.4939 Anthoceros agrestis HOM05D007927 ORTHO05D010029 1.9e-39 167.2 218 43.6
Mapoly0115s0058 Marchantia polymorpha HOM05D007927 ORTHO05D010029 2.1e-35 153.7 238 41.6
SEGI_09554 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 3.2e-31 139.8 90 75.6
Lj4C838G8 Lonicera japonica HOM05D007927 ORTHO05D010029 2.5e-28 130.2 276 38.0
Cre01.g055151 Chlamydomonas reinhardtii HOM05D007927 ORTHO05D010029 3.4e-17 93.2 133 38.3
FvH4_1g24060 Fragaria vesca HOM05D007927 ORTHO05D010029 4.9e-16 89.4 78 66.7
Sabra07G0086200 Salix brachista HOM05D007927 ORTHO05D010029 6.4e-16 89.0 137 48.9
Gohir.D01G107700 Gossypium hirsutum HOM05D005170 ORTHO05D010029 5.1e-13 79.3 53 67.9
Gohir.D06G120200 Gossypium hirsutum HOM05D005170 ORTHO05D010029 5.1e-13 79.3 65 56.9
Gohir.D03G074800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 8.7e-13 78.6 46 78.3
Gohir.D09G047700 Gossypium hirsutum HOM05D007927 ORTHO05D010029 1.1e-12 78.2 46 78.3
Gorai.010G138300 Gossypium raimondii HOM05D007927 ORTHO05D010029 1.5e-12 77.8 51 68.6
Gorai.009G413100 Gossypium raimondii HOM05D007927 ORTHO05D010029 1.3e-11 74.7 51 66.7
Gohir.D04G109100 Gossypium hirsutum HOM05D007927 ORTHO05D010029 5.3e-10 69.3 46 71.7
Pp3c2_6800 Physcomitrium patens HOM05D019817 ORTHO05D016515 9.3e-07 58.5 93 31.2
Mapoly0178s0020 Marchantia polymorpha HOM05D019817 ORTHO05D016515 2.7e-06 57.0 92 33.7
Potri.007G105401 Populus trichocarpa HOM05D007927 ORTHO05D010029 6.0e-06 55.8 116 41.4
PRCOL_00005335 Prasinoderma coloniale HOM05D016266 ORTHO05D019595 6.0e-06 55.8 94 29.8
SEGI_14611 Sequoiadendron giganteum HOM05D019817 ORTHO05D016515 6.0e-06 55.8 94 30.9


User provided reference genes

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