Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G1841 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.9e-139 499.2 263 100.0
FvH4_1g19820 Fragaria vesca HOM05D006387 ORTHO05D008533 1.6e-133 479.6 263 96.2
FAN19G3199 Fragaria x ananassa HOM05D006387 ORTHO05D008533 8.1e-130 467.2 258 95.3
FAN28G2490 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.4e-118 429.9 233 95.3
RcHm_v2.0_Chr2g0111431 Rosa chinensis HOM05D006387 ORTHO05D008533 2.5e-118 429.1 262 85.9
Prupe.6G197200 Prunus persica HOM05D006387 ORTHO05D008533 3.7e-98 362.1 244 80.7
Thecc.01G091900 Theobroma cacao HOM05D006387 ORTHO05D008533 1.7e-95 353.2 237 75.5
QL06p047416 Quercus lobata HOM05D006387 ORTHO05D008533 2.9e-95 352.4 257 72.4
QL93p1865_0022 Quercus lobata HOM05D006387 ORTHO05D008533 2.9e-95 352.4 257 72.4
Manes.12G127300 Manihot esculenta HOM05D006387 ORTHO05D008533 6.5e-95 351.3 222 80.2
Gorai.007G233200 Gossypium raimondii HOM05D006387 ORTHO05D008533 1.2e-93 347.1 227 77.1
CiPaw.01G046800 Carya illinoinensis HOM05D006387 ORTHO05D008533 2.1e-93 346.3 248 71.8
Glyma.18G146100 Glycine max HOM05D006387 ORTHO05D008533 2.7e-93 345.9 228 76.8
Cfa004350 Carpinus fangiana HOM05D006387 ORTHO05D008533 3.6e-93 345.5 221 77.8
MD15G1314800 Malus domestica HOM05D006387 ORTHO05D008533 3.6e-93 345.5 270 73.0
Ca_22597_v3 Cicer arietinum L. HOM05D006387 ORTHO05D008533 7.9e-93 344.4 228 75.0
MELO3C007722.2 Cucumis melo HOM05D006387 ORTHO05D008533 1.8e-92 343.2 239 74.9
SalBow5G0849 Salvia bowleyana HOM05D006387 ORTHO05D008533 1.5e-91 340.1 201 81.1
CsaV3_6G045090 Cucumis sativus L. HOM05D006387 ORTHO05D008533 2.6e-91 339.3 239 73.6
Sopen11g005290 Solanum pennellii HOM05D006387 ORTHO05D008533 5.7e-91 338.2 258 70.5
Nitab4.5_0001468g0050 Nicotiana tabacum HOM05D006387 ORTHO05D008533 7.4e-91 337.8 201 80.6
Sed0018819 Sechium edule HOM05D006387 ORTHO05D008533 7.4e-91 337.8 196 84.7
TWI53G0307 Tripterygium wilfordii HOM05D006387 ORTHO05D008533 7.4e-91 337.8 253 71.1
arahy.Tifrunner.gnm1.ann1.K640S8 Arachis hypogaea HOM05D006387 ORTHO05D008533 1.7e-90 336.7 200 81.5
Dinv13619 Davidia involucrata HOM05D006387 ORTHO05D008533 1.7e-90 336.7 228 75.0
Cpa.g.sc55.48 Carica papaya HOM05D006387 ORTHO05D008533 2.2e-90 336.3 198 82.3
Nitab4.5_0010196g0030 Nicotiana tabacum HOM05D006387 ORTHO05D008533 2.2e-90 336.3 201 80.6
vmacro18567 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 2.2e-90 336.3 197 81.2
arahy.Tifrunner.gnm1.ann1.ZYRR1K Arachis hypogaea HOM05D006387 ORTHO05D008533 2.8e-90 335.9 228 74.1
AUR62003651 Chenopodium quinoa HOM05D006387 ORTHO05D008533 3.7e-90 335.5 231 72.7
Medtr8g068855 Medicago truncatula HOM05D006387 ORTHO05D008533 3.7e-90 335.5 227 77.1
Solyc11g010510.2 Solanum lycopersicum HOM05D006387 ORTHO05D008533 3.7e-90 335.5 258 67.4
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 3.7e-90 335.5 232 73.7
Atru.chr3.1288 Acer truncatum HOM05D006387 ORTHO05D008533 1.1e-89 334.0 228 73.7
AUR62017959 Chenopodium quinoa HOM05D006387 ORTHO05D008533 1.4e-89 333.6 246 70.3
Ciclev10026362m.g Citrus clementina HOM05D006387 ORTHO05D008533 1.4e-89 333.6 212 78.8
Gohir.D11G217100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.4e-89 333.6 211 79.1
Rhsim08G0015000 Rhododendron simsii HOM05D006387 ORTHO05D008533 1.4e-89 333.6 197 81.7
THA.LOC104804173 Tarenaya hassleriana HOM05D006387 ORTHO05D008533 1.8e-89 333.2 198 81.8
Lj4g0015074 Lotus japonicus HOM05D006387 ORTHO05D008533 2.4e-89 332.8 227 74.0
PGSC0003DMG400016205 Solanum tuberosum HOM05D006387 ORTHO05D008533 2.4e-89 332.8 211 77.3
Gohir.A11G206500 Gossypium hirsutum HOM05D006387 ORTHO05D008533 5.3e-89 331.6 237 72.2
Lalb_Chr05g0228491 Lupinus albus HOM05D006387 ORTHO05D008533 7.0e-89 331.3 251 69.3
Peaxi162Scf00447g00119 Petunia axillaris HOM05D006387 ORTHO05D008533 9.1e-89 330.9 247 68.8
Lju188A1T76 Lonicera japonica HOM05D006387 ORTHO05D008533 1.2e-88 330.5 197 81.2
TPR.G14610 Trifolium pratense HOM05D006387 ORTHO05D008533 1.2e-88 330.5 197 80.7
Cc07_g14250 Coffea canephora HOM05D006387 ORTHO05D008533 1.6e-88 330.1 201 77.1
Lj4A270T42 Lonicera japonica HOM05D006387 ORTHO05D008533 1.6e-88 330.1 197 81.2
MSTRG.15694 Avicennia marina HOM05D006387 ORTHO05D008533 2.0e-88 329.7 223 74.9
Migut.K00786 Erythranthe guttata HOM05D006387 ORTHO05D008533 2.0e-88 329.7 196 81.1
Psat4g119200 Pisum sativum HOM05D006387 ORTHO05D008533 4.5e-88 328.6 228 73.2
Sc16g0000480 Simmondsia chinensis HOM05D006387 ORTHO05D008533 4.5e-88 328.6 225 76.0
EL10Ac6g15218 Beta vulgaris HOM05D006387 ORTHO05D008533 5.9e-88 328.2 246 69.9
Haze_15057 Corylus avellana HOM05D000344 ORTHO05D000934 2.9e-87 325.9 190 83.7
Aa31LG6G15050 Aethionema arabicum HOM05D006387 ORTHO05D008533 6.5e-87 324.7 231 72.7
HanXRQChr14g0442661 Helianthus annuus HOM05D006387 ORTHO05D008533 6.5e-87 324.7 198 77.3
CAN.G1388.12 Capsicum annuum HOM05D006387 ORTHO05D008533 1.1e-86 323.9 256 65.6
PSO541G2357 Papaver somniferum HOM05D006387 ORTHO05D008533 1.1e-86 323.9 237 67.1
Eucgr.H04725 Eucalyptus grandis HOM05D006387 ORTHO05D008533 2.5e-86 322.8 196 79.6
ECA238G0943 Erigeron canadensis HOM05D006387 ORTHO05D008533 7.2e-86 321.2 198 77.3
MBI06_g39563_MAGBIO Magnolia biondii HOM05D006387 ORTHO05D008533 1.6e-85 320.1 225 72.0
Sp7g10120 Schrenkiella parvula HOM05D006387 ORTHO05D008533 4.7e-85 318.5 213 74.2
Thhalv10026114m.g Eutrema salsugineum HOM05D006387 ORTHO05D008533 8.0e-85 317.8 215 74.9
PGR102G1540 Punica granatum HOM05D006387 ORTHO05D008533 1.0e-84 317.4 200 76.5
GSVIVG01006732001 Vitis vinifera HOM05D006387 ORTHO05D008533 1.8e-84 316.6 201 75.1
BcaNung03133 Brassica carinata HOM05D006387 ORTHO05D008533 2.3e-84 316.2 229 69.4
Carub.0007s0212 Capsella rubella HOM05D006387 ORTHO05D008533 2.3e-84 316.2 228 71.1
Phvul.003G289400 Phaseolus vulgaris HOM05D006387 ORTHO05D008533 3.0e-84 315.8 256 64.1
GSVIVG01003594001 Vitis vinifera HOM05D006387 ORTHO05D008533 4.0e-84 315.5 201 74.6
Potri.007G010400 Populus trichocarpa HOM05D006387 ORTHO05D008533 5.2e-84 315.1 197 78.2
Hund16539 Selenicereus undatus HOM05D006387 ORTHO05D008533 5.2e-84 315.1 220 73.6
A04p09020 Brassica napus HOM05D006387 ORTHO05D008533 1.2e-83 313.9 213 73.2
BraA04t16597Z Brassica rapa HOM05D006387 ORTHO05D008533 1.2e-83 313.9 213 73.2
Sabra07G0007900 Salix brachista HOM05D006387 ORTHO05D008533 2.0e-83 313.2 222 71.6
unitig_748.g8645 Utricularia gibba HOM05D006387 ORTHO05D008533 3.3e-83 312.4 214 72.0
Aqoxy6G01447 Aquilegia oxysepala HOM05D006387 ORTHO05D008533 5.7e-83 311.6 196 73.5
Duzib187G0618 Durio zibethinus HOM05D006387 ORTHO05D008533 5.7e-83 311.6 211 73.5
BcaC02g09451 Brassica carinata HOM05D006387 ORTHO05D008533 1.7e-82 310.1 233 69.1
C04p42900 Brassica napus HOM05D006387 ORTHO05D008533 1.7e-82 310.1 213 72.3
BolC4t25859H Brassica oleracea HOM05D006387 ORTHO05D008533 2.2e-82 309.7 213 72.3
ClCG01G018420 Citrullus lanatus HOM05D006387 ORTHO05D008533 2.8e-82 309.3 239 68.6
Lsat_1_v5_gn_2_70881 Lactuca sativa HOM05D006387 ORTHO05D008533 6.3e-82 308.1 196 75.0
AL7G12534 Arabidopsis lyrata HOM05D006387 ORTHO05D008533 3.1e-81 305.8 221 70.1
CANSAT01G3264 Cannabis sativa HOM05D006387 ORTHO05D008533 1.7e-79 300.1 193 81.3
Nn5g29908 Nelumbo nucifera HOM05D006387 ORTHO05D008533 1.5e-78 297.0 231 64.9
Actinidia26608 Actinidia chinensis HOM05D006387 ORTHO05D008533 4.2e-78 295.4 197 75.1
CDE08G1301 Ceratophyllum demersum HOM05D006387 ORTHO05D008533 4.4e-75 285.4 195 70.8
ATR0022G066 Amborella trichopoda HOM05D006387 ORTHO05D008533 7.0e-73 278.1 215 64.2
FAN23G2995 Fragaria x ananassa HOM05D006387 ORTHO05D008533 7.0e-73 278.1 158 97.5
Zm00001eb038350 Zea mays HOM05D006387 ORTHO05D008533 4.5e-72 275.4 194 67.5
Os08g0478100 Oryza sativa ssp. japonica HOM05D006387 ORTHO05D008533 2.3e-71 273.1 217 65.0
SEGI_33925 Sequoiadendron giganteum HOM05D006387 ORTHO05D008533 1.3e-63 247.3 195 61.0
vmacro09229 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 1.6e-61 240.4 147 78.9
Gorai.007G059200 Gossypium raimondii HOM05D006387 ORTHO05D008533 9.8e-59 231.1 244 54.1
Glyma.08G280000 Glycine max HOM05D006387 ORTHO05D008533 6.4e-58 228.4 160 74.4
CSS0019105 Camellia sinensis var. sinensis HOM05D006387 ORTHO05D008533 2.3e-55 219.9 133 82.0
Gohir.D11G054100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 3.0e-55 219.5 244 52.9
AT4G38090 Arabidopsis thaliana HOM05D006387 ORTHO05D008533 6.8e-52 208.4 135 79.3
vmacro14991 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 2.6e-51 206.5 159 64.2
Pp3c7_18820 Physcomitrium patens HOM05D006387 ORTHO05D008533 2.9e-50 203.0 212 50.5
Gohir.A11G050750 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.2e-45 187.6 251 47.4
AagrBONN_evm.TU.Sc2ySwM_344.3556 Anthoceros agrestis HOM05D006387 ORTHO05D008533 8.9e-44 181.4 145 58.6
SMO361G0736 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 8.3e-42 174.9 131 64.9
Cre10.g448800 Chlamydomonas reinhardtii HOM05D006387 ORTHO05D008533 5.4e-41 172.2 183 47.0
VMungo0251G0198 Vigna mungo HOM05D006387 ORTHO05D008533 7.1e-41 171.8 127 72.4
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 9.5e-38 161.4 112 69.6
TPR.G1343 Trifolium pratense HOM05D000744 ORTHO05D000332 1.1e-36 157.9 95 76.8
RcHm_v2.0_Chr2g0111411 Rosa chinensis HOM05D006387 ORTHO05D008533 4.0e-36 156.0 133 66.9
HPP92_016734 Vanilla planifolia HOM05D006387 ORTHO05D008533 2.7e-32 143.3 121 57.9
MCO03G602 Micromonas commoda HOM05D006387 ORTHO05D008533 3.5e-32 142.9 191 42.4
SMO361G0739 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.7e-31 140.6 98 67.3
SMO361G0500 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 5.1e-31 139.0 136 47.8
PRCOL_00004912 Prasinoderma coloniale HOM05D006387 ORTHO05D008533 2.1e-29 133.7 187 40.1
CARHR246490 Cardamine hirsuta HOM05D006387 ORTHO05D008533 8.1e-29 131.7 118 61.0
Ah.03g140080 Amaranthus hybridus HOM05D006387 ORTHO05D008533 9.6e-22 108.2 69 65.2
COL.COLO4_27345 Corchorus olitorius HOM05D000344 ORTHO05D000934 1.7e-18 97.4 95 56.8
Hma1.2p1_0119F.1_g056580 Hydrangea macrophylla HOM05D006387 ORTHO05D008533 1.9e-17 94.0 52 78.8
HanXRQChr16g0520881 Helianthus annuus HOM05D006387 ORTHO05D008533 1.9e-14 84.0 51 76.5
SMO004G0012 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 4.8e-13 79.3 65 56.9
vmacro18230 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 1.1e-12 78.2 60 60.0
vmacro18321 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 9.0e-12 75.1 55 58.2
vmacro18566 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 1.2e-11 74.7 51 64.7
HPP92_016750 Vanilla planifolia HOM05D006387 ORTHO05D008533 7.1e-09 65.5 68 51.5
Actinidia06523 Actinidia chinensis HOM05D009440 ORTHO05D011919 1.0e-07 61.6 43 72.1
Ah.03g140070 Amaranthus hybridus HOM05D006387 ORTHO05D008533 1.9e-06 57.4 41 70.7


User provided reference genes

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