Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 5.4e-110 401.0 199 100.0
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 4.6e-109 397.9 199 99.5
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 4.6e-109 397.9 199 99.5
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 2.3e-108 395.6 199 98.5
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 2.5e-99 365.5 199 91.5
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 3.5e-85 318.5 199 79.9
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 7.1e-78 294.3 199 75.4
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 1.5e-72 276.6 199 72.9
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 5.9e-72 274.6 187 72.2
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 2.3e-68 262.7 187 71.1
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 8.7e-68 260.8 187 67.9
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 3.3e-67 258.8 187 69.5
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 4.3e-67 258.5 187 70.1
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 2.2e-66 256.1 202 66.3
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 2.8e-66 255.8 188 70.7
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 3.7e-66 255.4 187 68.4
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 1.1e-65 253.8 188 70.2
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 2.4e-65 252.7 187 66.8
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 4.1e-65 251.9 187 65.2
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 6.9e-65 251.1 187 65.2
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 9.1e-65 250.8 187 65.2
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 2.0e-64 249.6 187 63.6
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 5.9e-64 248.1 187 64.2
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 3.8e-63 245.4 187 64.2
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 5.0e-63 245.0 188 67.0
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 6.5e-63 244.6 188 67.6
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 4.2e-62 241.9 188 63.8
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 7.2e-62 241.1 181 65.7
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 1.6e-61 240.0 187 65.2
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 2.7e-61 239.2 188 62.2
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 6.1e-61 238.0 191 64.4
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 7.9e-61 237.7 188 64.9
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 7.9e-61 237.7 195 64.6
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 2.3e-60 236.1 195 63.6
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 3.9e-60 235.3 196 63.8
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 5.1e-60 235.0 194 62.9
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 1.5e-59 233.4 187 60.4
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 2.6e-59 232.6 191 61.8
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 2.6e-59 232.6 188 63.8
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 5.7e-59 231.5 250 52.0
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 7.4e-59 231.1 221 54.8
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 1.3e-58 230.3 188 60.6
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 1.3e-58 230.3 188 62.2
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 2.8e-58 229.2 188 61.2
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 4.8e-58 228.4 188 60.6
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 8.2e-58 227.6 187 62.6
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 1.1e-57 227.3 188 62.8
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 1.1e-57 227.3 188 60.6
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 1.1e-57 227.3 188 60.6
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 1.1e-57 227.3 180 61.7
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 1.1e-57 227.3 180 62.2
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 1.4e-57 226.9 188 60.1
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 1.4e-57 226.9 188 63.3
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 3.1e-57 225.7 189 61.9
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 5.3e-57 224.9 194 62.4
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 6.9e-57 224.6 190 59.5
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 9.1e-57 224.2 188 62.2
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 9.1e-57 224.2 187 60.4
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 3.4e-56 222.2 188 61.7
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 3.4e-56 222.2 194 61.9
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 4.5e-56 221.9 182 63.2
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 5.9e-56 221.5 188 60.1
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 5.9e-56 221.5 189 60.3
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 7.7e-56 221.1 194 61.9
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 7.7e-56 221.1 192 60.4
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.0e-55 220.7 188 61.2
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.0e-55 220.7 188 61.2
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 1.3e-55 220.3 192 60.4
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 1.7e-55 219.9 188 60.1
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 1.7e-55 219.9 188 61.7
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 2.9e-55 219.2 188 60.6
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 3.8e-55 218.8 181 59.1
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 3.8e-55 218.8 188 60.1
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 1.4e-54 216.9 194 58.8
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 3.2e-54 215.7 189 60.8
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 4.2e-54 215.3 188 59.6
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 2.7e-53 212.6 144 72.2
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 6.1e-53 211.5 191 57.6
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 1.0e-52 210.7 191 58.1
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 1.0e-52 210.7 201 59.2
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 1.4e-52 210.3 191 57.6
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 3.0e-52 209.1 174 60.3
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 6.7e-52 208.0 186 59.1
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 6.7e-52 208.0 159 67.9
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 1.5e-51 206.8 201 58.7
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 1.5e-51 206.8 185 56.2
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 2.0e-51 206.5 191 58.6
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 5.7e-51 204.9 189 58.2
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 2.2e-50 203.0 141 69.5
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 6.3e-50 201.4 180 57.2
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 3.5e-48 195.7 158 62.0
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 2.9e-47 192.6 151 61.6
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 1.0e-44 184.1 157 60.5
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 5.2e-44 181.8 189 55.0
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 6.7e-44 181.4 180 53.3
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 1.5e-43 180.3 150 60.0
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 4.8e-42 175.3 152 58.6
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 4.8e-42 175.3 140 63.6
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 1.6e-37 160.2 187 48.1
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 5.2e-36 155.2 144 56.2
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 8.3e-34 147.9 102 67.6
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 6.5e-31 138.3 133 51.1
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 1.6e-29 133.7 96 64.6
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 3.6e-29 132.5 189 45.5
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 4.7e-29 132.1 179 42.5
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 4.0e-28 129.0 124 50.8
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 1.4e-25 120.6 174 44.8
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 1.6e-24 117.1 161 39.8
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 2.0e-24 116.7 95 58.9
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 9.5e-22 107.8 86 58.1
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 4.7e-21 105.5 167 35.3
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 6.1e-21 105.1 133 41.4
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 1.7e-18 97.1 88 59.1
RcHm_v2.0_Chr7g0212941 Rosa chinensis HOM05D006513 ORTHO05D008150 2.3e-15 86.7 53 81.1
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 2.3e-15 86.7 86 53.5
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 1.6e-13 80.5 75 56.0
HPP92_027747 Vanilla planifolia HOM05D006513 ORTHO05D008150 3.1e-12 76.3 99 45.5
TAR090G0005 Trochodendron aralioides HOM05D006513 ORTHO05D008150 3.4e-11 72.8 67 58.2
Pp3c25_13070 Physcomitrium patens HOM05D006513 ORTHO05D008150 1.3e-10 70.9 105 33.3
AUR62043674 Chenopodium quinoa HOM05D006513 ORTHO05D003876 7.8e-08 61.6 51 58.8
Cpa.g.sc75.50 Carica papaya HOM05D006513 ORTHO05D008150 9.5e-06 54.7 48 66.7


User provided reference genes

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