Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G1611 Fragaria x ananassa HOM05D003940 ORTHO05D004461 1.0e-75 286.6 137 100.0
FvH4_4g03100 Fragaria vesca HOM05D003940 ORTHO05D004461 2.3e-35 152.5 84 88.1
FAN22G2069 Fragaria x ananassa HOM05D003940 ORTHO05D004461 2.3e-35 152.5 84 88.1
FAN12G3937 Fragaria x ananassa HOM05D003940 ORTHO05D004461 6.3e-33 144.4 84 85.7
FAN17G2041 Fragaria x ananassa HOM05D003940 ORTHO05D004461 4.1e-32 141.7 84 84.5
FvH4_7g33480 Fragaria vesca HOM05D003940 ORTHO05D004461 1.1e-29 133.7 123 65.0
RcHm_v2.0_Chr4g0391391 Rosa chinensis HOM05D003940 ORTHO05D004461 5.2e-27 124.8 84 71.4
FAN17G0281 Fragaria x ananassa HOM05D003940 ORTHO05D004461 4.1e-24 115.2 97 64.9
MD13G1210200 Malus domestica HOM05D003940 ORTHO05D004461 2.4e-16 89.4 86 57.0
MD16G1213100 Malus domestica HOM05D003940 ORTHO05D004461 3.5e-15 85.5 84 57.1
Prupe.1G034700 Prunus persica HOM05D003940 ORTHO05D004461 7.7e-15 84.3 85 57.6
Ca_09815_v3 Cicer arietinum L. HOM05D003940 ORTHO05D004461 2.3e-11 72.8 90 47.8
Lalb_Chr21g0312371 Lupinus albus HOM05D003940 ORTHO05D004461 2.3e-11 72.8 90 48.9
Lj5g0009696 Lotus japonicus HOM05D003940 ORTHO05D004461 3.0e-11 72.4 88 46.6
Glyma.20G202600 Glycine max HOM05D003940 ORTHO05D004461 8.8e-11 70.9 88 46.6
CANSAT78G1835 Cannabis sativa HOM05D003940 ORTHO05D004461 1.2e-10 70.5 93 47.3
Glyma.10G188200 Glycine max HOM05D003940 ORTHO05D004461 1.5e-10 70.1 88 46.6
Cfa008351 Carpinus fangiana HOM05D003940 ORTHO05D004461 2.0e-10 69.7 90 50.0
Phvul.007G129450 Phaseolus vulgaris HOM05D003940 ORTHO05D004461 2.6e-10 69.3 88 47.7
Haze_11334 Corylus avellana HOM05D003940 ORTHO05D004461 3.4e-10 68.9 91 49.5
Cpa.g.sc44.90 Carica papaya HOM05D003940 ORTHO05D004461 7.5e-10 67.8 92 46.7
CiPaw.01G188000 Carya illinoinensis HOM05D003940 ORTHO05D004461 1.3e-09 67.0 92 48.9
TPR.G26431 Trifolium pratense HOM05D006440 ORTHO05D003987 2.8e-09 65.9 88 48.9
Psat6g132880 Pisum sativum HOM05D003940 ORTHO05D004461 3.7e-09 65.5 88 47.7
Duzib151G0370 Durio zibethinus HOM05D003940 ORTHO05D004461 1.8e-08 63.2 85 41.2
THA.LOC104808609 Tarenaya hassleriana HOM05D003940 ORTHO05D004461 1.8e-08 63.2 86 48.8
Dinv44656 Davidia involucrata HOM05D003940 ORTHO05D004461 2.4e-08 62.8 74 45.9
Sp7g12530 Schrenkiella parvula HOM05D003940 ORTHO05D004461 2.4e-08 62.8 84 41.7
COL.COLO4_15828 Corchorus olitorius HOM05D003940 ORTHO05D004461 4.1e-08 62.0 85 45.9
Hma1.2p1_0986F.1_g244370 Hydrangea macrophylla HOM05D003940 ORTHO05D004461 7.0e-08 61.2 83 48.2
PGR031G1035 Punica granatum HOM05D003940 ORTHO05D004461 7.0e-08 61.2 85 45.9
CSS0017531 Camellia sinensis var. sinensis HOM05D003940 ORTHO05D004461 9.1e-08 60.8 83 44.6
Potri.008G164801 Populus trichocarpa HOM05D003940 ORTHO05D004461 1.6e-07 60.1 87 44.8
Solyc06g053700.1 Solanum lycopersicum HOM05D003940 ORTHO05D004461 1.6e-07 60.1 83 44.6
Sopen06g018810 Solanum pennellii HOM05D003940 ORTHO05D004461 1.6e-07 60.1 83 44.6
CsaV3_3G012380 Cucumis sativus L. HOM05D000244 ORTHO05D000179 2.0e-07 59.7 89 38.2
Thhalv10021654m.g Eutrema salsugineum HOM05D003940 ORTHO05D004461 2.0e-07 59.7 83 45.8
TPR.G15869 Trifolium pratense HOM05D003940 ORTHO05D004461 2.0e-07 59.7 85 43.5
Eucgr.H03139 Eucalyptus grandis HOM05D003940 ORTHO05D004461 4.5e-07 58.5 83 44.6
GSVIVG01027728001 Vitis vinifera HOM05D000515 ORTHO05D003188 4.5e-07 58.5 89 48.3
Nitab4.5_0000342g0180 Nicotiana tabacum HOM05D003940 ORTHO05D004461 5.9e-07 58.2 83 42.2
QL06p016655 Quercus lobata HOM05D003940 ORTHO05D004461 5.9e-07 58.2 85 48.2
PGSC0003DMG400016324 Solanum tuberosum HOM05D003940 ORTHO05D004461 5.9e-07 58.2 83 43.4
Nitab4.5_0007234g0020 Nicotiana tabacum HOM05D003940 ORTHO05D004461 7.7e-07 57.8 83 43.4
Migut.N00250 Erythranthe guttata HOM05D003940 ORTHO05D004461 1.0e-06 57.4 81 45.7
SGA_v2.0_scaffold101G29832 Striga asiatica HOM05D003940 ORTHO05D004461 1.0e-06 57.4 88 44.3
Sabra10G0034600 Salix brachista HOM05D003940 ORTHO05D004461 1.3e-06 57.0 75 46.7
Thecc.04G250000 Theobroma cacao HOM05D003940 ORTHO05D004461 1.3e-06 57.0 85 43.5
TAR362G0514 Trochodendron aralioides HOM05D003940 ORTHO05D004461 1.3e-06 57.0 81 43.2
CARHR099110 Cardamine hirsuta HOM05D003940 ORTHO05D004461 1.7e-06 56.6 82 47.6
Duzib212G0271 Durio zibethinus HOM05D003940 ORTHO05D004461 1.7e-06 56.6 85 38.8
Peaxi162Scf00024g01711 Petunia axillaris HOM05D003940 ORTHO05D004461 1.7e-06 56.6 86 38.4
Aa31LG8G9650 Aethionema arabicum HOM05D003940 ORTHO05D004461 3.8e-06 55.5 82 45.1
Gohir.D10G154400 Gossypium hirsutum HOM05D003940 ORTHO05D004461 3.8e-06 55.5 88 43.2
Gorai.011G172300 Gossypium raimondii HOM05D003940 ORTHO05D004461 3.8e-06 55.5 88 43.2
Lalb_Chr19g0128361 Lupinus albus HOM05D003940 ORTHO05D004461 3.8e-06 55.5 81 45.7
Sed0016632 Sechium edule HOM05D003940 ORTHO05D004461 3.8e-06 55.5 102 37.3
BcaB06g26449 Brassica carinata HOM05D003940 ORTHO05D004461 5.0e-06 55.1 83 43.4
Potri.010G073900 Populus trichocarpa HOM05D003940 ORTHO05D004461 5.0e-06 55.1 73 47.9
AT3G23170 Arabidopsis thaliana HOM05D003940 ORTHO05D004461 6.6e-06 54.7 88 45.5
AUR62002262 Chenopodium quinoa HOM05D003940 ORTHO05D004461 6.6e-06 54.7 85 36.5
Cc03_g05120 Coffea canephora HOM05D003940 ORTHO05D004461 6.6e-06 54.7 83 43.4
Psat6g138240 Pisum sativum HOM05D003940 ORTHO05D004461 6.6e-06 54.7 87 42.5
Thhalv10027546m.g Eutrema salsugineum HOM05D003940 ORTHO05D004461 8.6e-06 54.3 84 42.9


User provided reference genes

Program Settings