Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 7.7e-112 407.1 203 100.0
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 2.1e-72 276.2 209 72.7
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.1e-72 276.2 209 72.7
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.3e-71 273.5 209 71.8
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 5.2e-68 261.5 208 69.2
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 3.0e-63 245.7 207 63.8
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 1.1e-60 237.3 213 63.8
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 2.4e-60 236.1 213 62.4
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 4.9e-58 228.4 209 62.7
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 2.7e-56 222.6 207 58.9
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 4.6e-56 221.9 206 60.2
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 1.4e-52 210.3 206 56.3
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 3.1e-52 209.1 212 55.2
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 3.1e-52 209.1 217 53.9
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 4.0e-52 208.8 212 54.2
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 6.9e-52 208.0 233 51.5
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 4.4e-51 205.3 212 55.7
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 5.8e-51 204.9 218 55.0
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 7.6e-51 204.5 206 53.9
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 7.6e-51 204.5 212 54.7
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 9.9e-51 204.1 207 55.1
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 3.8e-50 202.2 213 53.1
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 8.4e-50 201.1 212 52.8
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 1.4e-49 200.3 212 54.7
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 1.4e-49 200.3 209 56.0
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 1.4e-49 200.3 208 53.8
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 1.4e-49 200.3 208 53.8
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 2.4e-49 199.5 208 53.4
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 1.2e-48 197.2 209 55.0
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 1.2e-48 197.2 218 52.3
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 2.7e-48 196.1 215 51.2
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 3.5e-48 195.7 211 52.1
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 4.6e-48 195.3 208 56.7
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 6.0e-48 194.9 216 52.8
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 7.9e-48 194.5 225 50.2
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 1.3e-47 193.7 210 53.3
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 1.3e-47 193.7 219 53.4
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 2.3e-47 193.0 219 51.1
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 2.3e-47 193.0 210 52.4
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 2.3e-47 193.0 215 52.6
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 3.9e-47 192.2 206 54.4
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 5.1e-47 191.8 209 49.8
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 8.7e-47 191.0 129 75.2
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 1.1e-46 190.7 205 53.7
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 1.1e-46 190.7 204 53.9
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 1.5e-46 190.3 210 51.9
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 2.5e-46 189.5 220 50.0
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 4.3e-46 188.7 212 50.9
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 7.3e-46 188.0 219 50.7
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 9.6e-46 187.6 210 51.4
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 1.6e-45 186.8 209 52.6
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 3.6e-45 185.7 212 50.5
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 3.6e-45 185.7 215 49.3
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 4.8e-45 185.3 210 51.4
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 1.4e-44 183.7 226 47.3
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 1.4e-44 183.7 208 51.0
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 5.3e-44 181.8 210 50.0
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 2.0e-43 179.9 213 50.7
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 2.0e-43 179.9 208 49.5
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 2.0e-43 179.9 209 51.2
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 2.6e-43 179.5 219 48.9
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 4.5e-43 178.7 211 50.7
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 4.5e-43 178.7 220 50.5
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 5.8e-43 178.3 227 50.2
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 5.8e-43 178.3 215 47.9
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 9.9e-43 177.6 206 53.4
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 1.3e-42 177.2 211 50.2
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 1.3e-42 177.2 211 50.2
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 1.3e-42 177.2 210 50.0
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 8.4e-42 174.5 212 48.1
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 1.1e-41 174.1 212 48.1
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 1.1e-41 174.1 231 46.3
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 1.9e-41 173.3 217 47.9
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 2.4e-41 172.9 212 47.6
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 4.2e-41 172.2 212 47.2
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 4.2e-41 172.2 212 47.2
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 5.5e-41 171.8 211 48.3
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 5.5e-41 171.8 206 48.1
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 7.1e-41 171.4 212 46.7
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 1.6e-40 170.2 215 45.6
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 2.7e-40 169.5 213 49.3
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 2.7e-40 169.5 192 50.5
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 4.6e-40 168.7 206 49.5
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 6.0e-40 168.3 212 48.1
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 8.7e-39 164.5 210 46.7
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 8.7e-39 164.5 209 42.6
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 1.9e-38 163.3 188 51.6
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 3.3e-38 162.5 97 70.1
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 1.6e-37 160.2 200 47.5
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 4.8e-37 158.7 114 60.5
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 3.8e-34 149.1 184 46.7
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 4.2e-33 145.6 177 47.5
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 4.8e-29 132.1 102 55.9
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 1.2e-27 127.5 102 56.9
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 5.9e-27 125.2 161 47.2
FAN02G1845 Fragaria x ananassa HOM05D000599 ORTHO05D000554 6.5e-26 121.7 70 94.3
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 4.6e-24 115.5 69 73.9
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 3.0e-23 112.8 168 39.9
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 2.2e-21 106.7 167 41.9
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 2.2e-18 96.7 168 41.1
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 1.4e-17 94.0 56 73.2
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 1.9e-17 93.6 201 36.3
SHI02791 Sapria himalayana HOM05D006529 ORTHO05D008380 5.1e-15 85.5 49 69.4
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.2e-11 74.3 47 83.0
CBR_g10883 Chara braunii HOM05D006529 ORTHO05D008380 2.6e-11 73.2 181 33.1
SMO164G0011 Selaginella moellendorffii HOM05D006529 ORTHO05D008380 1.1e-09 67.8 98 33.7
FAN12G3715 Fragaria x ananassa HOM05D006529 ORTHO05D198857 3.9e-07 59.3 68 57.4
Sopen08g011810 Solanum pennellii HOM05D006529 ORTHO05D008380 3.9e-07 59.3 73 41.1
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 2.0e-06 57.0 134 33.6
Solyc08g041690.1 Solanum lycopersicum HOM05D006529 ORTHO05D008380 4.4e-06 55.8 34 70.6
Nitab4.5_0009098g0020 Nicotiana tabacum HOM05D006529 ORTHO05D008380 7.4e-06 55.1 54 61.1
C01p22040 Brassica napus HOM05D006529 ORTHO05D008380 9.7e-06 54.7 62 41.9
BolC1t02133H Brassica oleracea HOM05D006529 ORTHO05D008380 9.7e-06 54.7 62 41.9


User provided reference genes

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