Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G1492 Fragaria x ananassa HOM05D003258 ORTHO05D010103 5.8e-222 774.2 487 100.0
FAN09G0027 Fragaria x ananassa HOM05D003258 ORTHO05D010103 6.9e-183 644.4 487 86.9
FAN05G3237 Fragaria x ananassa HOM05D003258 ORTHO05D010103 2.1e-163 579.7 378 86.0
FvH4_4g09880 Fragaria vesca HOM05D003258 ORTHO05D010103 5.5e-148 528.5 368 75.3
FAN17G1029 Fragaria x ananassa HOM05D003258 ORTHO05D010103 2.3e-146 523.1 382 76.7
FvH4_3g06730 Fragaria vesca HOM05D003258 ORTHO05D010103 1.5e-145 520.4 368 74.5
FAN13G0385 Fragaria x ananassa HOM05D003258 ORTHO05D010103 8.5e-141 504.6 484 74.0
FvH4_6g39110 Fragaria vesca HOM05D003258 ORTHO05D010103 1.2e-139 500.7 422 73.0
FAN03G0862 Fragaria x ananassa HOM05D003258 ORTHO05D010103 1.3e-136 490.7 360 80.6
FAN23G2739 Fragaria x ananassa HOM05D003258 ORTHO05D010103 7.5e-129 464.9 365 73.7
FvH4_4g04830 Fragaria vesca HOM05D003258 ORTHO05D010103 1.8e-122 443.7 368 66.0
FAN04G0575 Fragaria x ananassa HOM05D003258 ORTHO05D010103 7.5e-121 438.3 367 71.9
FAN08G0122 Fragaria x ananassa HOM05D003258 ORTHO05D010103 2.8e-115 419.9 232 89.7
FAN11G0018 Fragaria x ananassa HOM05D003258 ORTHO05D010103 8.9e-106 388.3 367 64.6
FAN20G1692 Fragaria x ananassa HOM05D003258 ORTHO05D010103 1.3e-104 384.4 250 77.2
FAN17G0436 Fragaria x ananassa HOM05D003258 ORTHO05D010103 4.1e-103 379.4 324 78.4
FAN03G1447 Fragaria x ananassa HOM05D003258 ORTHO05D013880 5.8e-97 359.0 271 83.0
FvH4_6g36750 Fragaria vesca HOM05D003258 ORTHO05D010103 7.3e-92 342.0 271 69.0
FAN05G0426 Fragaria x ananassa HOM05D003258 ORTHO05D010103 3.4e-89 333.2 271 69.0
FAN02G3671 Fragaria x ananassa HOM05D003258 ORTHO05D010103 1.3e-88 331.3 355 63.4
FAN04G2620 Fragaria x ananassa HOM05D003258 ORTHO05D010103 3.0e-85 320.1 355 61.7
FvH4_6g34231 Fragaria vesca HOM05D003258 ORTHO05D010103 3.2e-79 300.1 259 64.1
FAN28G1744 Fragaria x ananassa HOM05D003258 ORTHO05D010103 8.7e-77 292.0 235 67.2
FAN22G0544 Fragaria x ananassa HOM05D003258 ORTHO05D010103 1.6e-75 287.7 212 72.6
FAN05G0505 Fragaria x ananassa HOM05D003258 ORTHO05D010103 2.1e-75 287.3 500 55.8
FAN25G2924 Fragaria x ananassa HOM05D003258 ORTHO05D010103 3.4e-73 280.0 234 66.2
FAN15G1765 Fragaria x ananassa HOM05D003258 ORTHO05D010103 7.9e-70 268.9 355 52.1
FAN09G1986 Fragaria x ananassa HOM05D003258 ORTHO05D010103 1.3e-69 268.1 220 66.4
FAN25G3145 Fragaria x ananassa HOM05D003258 ORTHO05D013880 1.1e-68 265.0 220 64.5
FAN13G1681 Fragaria x ananassa HOM05D003258 ORTHO05D013880 1.9e-68 264.2 235 60.9
FvH4_3g24741 Fragaria vesca HOM05D003258 ORTHO05D010103 5.3e-66 256.1 275 53.8
FAN05G1566 Fragaria x ananassa HOM05D003258 ORTHO05D010103 2.0e-65 254.2 148 85.8
FAN09G2100 Fragaria x ananassa HOM05D003258 ORTHO05D013880 1.7e-64 251.1 246 57.7
FvH4_7g04390 Fragaria vesca HOM05D003258 ORTHO05D013880 9.3e-63 245.4 145 81.4
FAN28G0204 Fragaria x ananassa HOM05D003258 ORTHO05D013880 1.2e-62 245.0 137 86.9
FAN28G0675 Fragaria x ananassa HOM05D003258 ORTHO05D010103 8.7e-61 238.8 223 68.2
FAN28G0006 Fragaria x ananassa HOM05D003258 ORTHO05D202578 1.5e-60 238.0 137 86.9
FAN20G2069 Fragaria x ananassa HOM05D003258 ORTHO05D010103 5.6e-60 236.1 188 68.1
FAN16G2915 Fragaria x ananassa HOM05D003258 ORTHO05D198708 6.5e-56 222.6 188 89.9
FAN27G0683 Fragaria x ananassa HOM05D003258 ORTHO05D010103 1.0e-53 215.3 242 59.1
FvH4_6g36710 Fragaria vesca HOM05D003258 ORTHO05D010103 5.7e-52 209.5 179 60.9
FAN15G2903 Fragaria x ananassa HOM05D003258 ORTHO05D013880 2.8e-51 207.2 148 71.6
FvH4_3g33300 Fragaria vesca HOM05D003258 ORTHO05D013880 4.8e-51 206.5 118 83.9
FAN22G1540 Fragaria x ananassa HOM05D003258 ORTHO05D013880 3.4e-49 200.3 119 83.2
FAN12G0125 Fragaria x ananassa HOM05D003258 ORTHO05D013880 1.9e-47 194.5 192 74.5
FAN14G2791 Fragaria x ananassa HOM05D003258 ORTHO05D010103 9.3e-47 192.2 220 50.0
FAN02G2634 Fragaria x ananassa HOM05D003258 ORTHO05D010103 4.6e-46 189.9 246 47.6
FAN28G2193 Fragaria x ananassa HOM05D003258 ORTHO05D000320 1.3e-45 188.3 107 85.0
FAN28G1402 Fragaria x ananassa HOM05D003258 ORTHO05D010103 3.0e-45 187.2 148 71.6
FAN16G3590 Fragaria x ananassa HOM05D003258 ORTHO05D010103 8.8e-45 185.7 245 49.0
FvH4_4g09190 Fragaria vesca HOM05D003258 ORTHO05D013880 1.1e-39 168.7 93 88.2
FAN22G1419 Fragaria x ananassa HOM05D003258 ORTHO05D010103 1.1e-39 168.7 252 44.4
FAN25G3429 Fragaria x ananassa HOM05D003258 ORTHO05D010103 1.9e-39 167.9 99 84.8
FAN20G1031 Fragaria x ananassa HOM05D003258 ORTHO05D204453 6.7e-37 159.5 119 70.6
FvH4_6g34230 Fragaria vesca HOM05D003258 ORTHO05D013880 8.8e-37 159.1 86 88.4
FAN28G2475 Fragaria x ananassa HOM05D003258 ORTHO05D010103 3.3e-36 157.1 175 65.7
FAN04G2707 Fragaria x ananassa HOM05D003258 ORTHO05D013880 6.3e-35 152.9 86 86.0
FAN22G2354 Fragaria x ananassa HOM05D003258 ORTHO05D013880 1.2e-33 148.7 78 91.0
FAN28G1833 Fragaria x ananassa HOM05D003258 ORTHO05D013880 1.2e-33 148.7 81 90.1
FAN05G0310 Fragaria x ananassa HOM05D003258 ORTHO05D010103 7.7e-33 146.0 94 75.5
FAN28G1659 Fragaria x ananassa HOM05D003258 ORTHO05D201353 6.5e-32 142.9 86 81.4
FAN25G3498 Fragaria x ananassa HOM05D003258 ORTHO05D200774 7.2e-31 139.4 174 70.7
FvH4_3g17150 Fragaria vesca HOM05D003258 ORTHO05D010103 4.4e-28 130.2 78 84.6
RcHm_v2.0_Chr7g0195461 Rosa chinensis HOM05D001313 ORTHO05D001590 4.4e-28 130.2 281 32.4
FvH4_5g04060 Fragaria vesca HOM05D001313 ORTHO05D001590 1.7e-27 128.3 268 32.1
FAN08G0328 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.7e-27 128.3 276 32.2
FAN18G2114 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.7e-27 128.3 268 32.1
FAN18G3588 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.4e-26 125.2 255 32.2
FAN27G1458 Fragaria x ananassa HOM05D003258 ORTHO05D210372 2.0e-25 121.3 70 84.3
FAN25G1390 Fragaria x ananassa HOM05D003258 ORTHO05D013880 4.5e-25 120.2 68 88.2
MD06G1101900 Malus domestica HOM05D001313 ORTHO05D001590 4.7e-22 110.2 274 28.8
MD06G1101600 Malus domestica HOM05D001313 ORTHO05D001590 1.8e-21 108.2 259 30.1
FAN01G2108 Fragaria x ananassa HOM05D003258 ORTHO05D010059 2.3e-21 107.8 64 92.2
FAN05G3167 Fragaria x ananassa HOM05D003258 ORTHO05D010103 6.7e-21 106.3 64 90.6
FAN25G0608 Fragaria x ananassa HOM05D003258 ORTHO05D010103 1.3e-19 102.1 64 87.5
Prupe.5G115000 Prunus persica HOM05D001313 ORTHO05D001590 3.7e-19 100.5 274 27.0
FAN01G2413 Fragaria x ananassa HOM05D003258 ORTHO05D010103 8.2e-19 99.4 64 85.9
FAN05G4765 Fragaria x ananassa HOM05D003258 ORTHO05D010103 1.4e-18 98.6 64 85.9
MD05G1071400 Malus domestica HOM05D001313 ORTHO05D001590 3.1e-18 97.4 244 27.0
FvH4_2g09801 Fragaria vesca HOM05D012588 ORTHO05D001590 9.1e-18 95.9 273 28.6
FAN22G0347 Fragaria x ananassa HOM05D003258 ORTHO05D010103 9.1e-18 95.9 64 81.2
FAN04G0718 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.0e-17 94.7 269 26.8
FvH4_2g10140 Fragaria vesca HOM05D012588 ORTHO05D001590 2.7e-17 94.4 253 28.1
FAN15G1451 Fragaria x ananassa HOM05D012588 ORTHO05D001590 3.5e-17 94.0 267 28.5
RcHm_v2.0_Chr5g0041501 Rosa chinensis HOM05D001313 ORTHO05D001590 3.8e-16 90.5 261 26.4
MD10G1053600 Malus domestica HOM05D023633 ORTHO05D001590 5.0e-16 90.1 260 26.5
FAN12G2210 Fragaria x ananassa HOM05D003258 ORTHO05D206473 6.5e-16 89.7 44 90.9
FAN28G2454 Fragaria x ananassa HOM05D003258 ORTHO05D010103 6.5e-16 89.7 64 78.1
RcHm_v2.0_Chr6g0266141 Rosa chinensis HOM05D012588 ORTHO05D001590 6.5e-16 89.7 267 28.1
FAN05G2506 Fragaria x ananassa HOM05D003258 ORTHO05D210436 1.5e-15 88.6 55 78.2
FvH4_1g28820 Fragaria vesca HOM05D001313 ORTHO05D001590 1.9e-15 88.2 259 26.6
FAN08G3027 Fragaria x ananassa HOM05D003258 ORTHO05D010103 1.9e-15 88.2 59 81.4
RcHm_v2.0_Chr3g0457901 Rosa chinensis HOM05D028871 ORTHO05D001590 2.1e-14 84.7 274 25.2
RcHm_v2.0_Chr6g0266151 Rosa chinensis HOM05D012588 ORTHO05D001590 2.1e-14 84.7 261 26.1
FAN16G3338 Fragaria x ananassa HOM05D003258 ORTHO05D205062 5.2e-13 80.1 41 87.8
FAN28G0883 Fragaria x ananassa HOM05D003258 ORTHO05D200222 1.5e-12 78.6 53 79.2
FAN16G1555 Fragaria x ananassa HOM05D011367 ORTHO05D001590 2.0e-12 78.2 257 25.3
FAN16G3252 Fragaria x ananassa HOM05D011367 ORTHO05D001590 2.0e-12 78.2 257 25.3
TWI77G0254 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 2.0e-12 78.2 239 23.4
FAN06G5077 Fragaria x ananassa HOM05D011367 ORTHO05D001590 5.7e-12 76.6 254 25.6
FvH4_4g16810 Fragaria vesca HOM05D003258 ORTHO05D010103 9.8e-12 75.9 64 73.4
FAN02G1232 Fragaria x ananassa HOM05D000390 ORTHO05D010103 1.3e-11 75.5 38 86.8
FAN12G1290 Fragaria x ananassa HOM05D003258 ORTHO05D010103 1.7e-11 75.1 123 42.3
FvH4_4g04901 Fragaria vesca HOM05D003258 ORTHO05D010103 2.2e-11 74.7 97 52.6
FvH4_5g07921 Fragaria vesca HOM05D011367 ORTHO05D001590 2.8e-11 74.3 255 25.9
MD05G1170800 Malus domestica HOM05D023633 ORTHO05D001590 2.8e-11 74.3 249 23.7
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 6.3e-11 73.2 246 25.2
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 8.3e-11 72.8 246 24.8
FAN05G3669 Fragaria x ananassa HOM05D003258 ORTHO05D204867 8.3e-11 72.8 42 88.1
Rhsim05G0036100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-10 72.4 244 24.2
Rhsim12G0033500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-10 72.4 244 24.2
Rhsim12G0031000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.4e-10 72.0 247 24.7
RhsimUnG0230900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.4e-10 72.0 244 23.8
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.8e-10 71.6 246 24.8
FAN28G1312 Fragaria x ananassa HOM05D003258 ORTHO05D208505 1.8e-10 71.6 53 73.6
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.8e-10 71.6 270 23.7
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.8e-10 71.6 241 24.1
Rhsim03G0047500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.4e-10 71.2 244 24.2
Rhsim02G0220500 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.1e-10 70.9 244 23.8
vmacro18964 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 7.0e-10 69.7 256 23.4
Aqoxy3G02580 Aquilegia oxysepala HOM05D019735 ORTHO05D019678 1.2e-09 68.9 275 23.6
FAN18G1449 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.0e-09 68.2 241 24.9
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.0e-09 68.2 256 21.1
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.7e-09 67.8 256 21.1
CSS0015660 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.5e-09 67.4 243 24.7
CSS0008720 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.5e-09 67.0 245 24.5
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 4.5e-09 67.0 250 24.0
MD14G1121200 Malus domestica HOM05D001313 ORTHO05D001590 4.5e-09 67.0 220 27.3
CSS0005751 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D001590 1.7e-08 65.1 243 24.3
FAN15G3309 Fragaria x ananassa HOM05D012588 ORTHO05D001590 3.8e-08 63.9 301 24.6
MD06G1101700 Malus domestica HOM05D001313 ORTHO05D001590 5.0e-08 63.5 190 26.8
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 8.6e-08 62.8 235 23.4
Rhsim05G0021000 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.6e-08 62.8 254 20.5
FAN01G2071 Fragaria x ananassa HOM05D003258 ORTHO05D198837 1.1e-07 62.4 31 90.3
FAN03G1737 Fragaria x ananassa HOM05D003258 ORTHO05D207174 1.1e-07 62.4 31 90.3
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.5e-07 62.0 262 21.8
Rhsim03G0108100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-07 62.0 237 24.5
FAN27G1165 Fragaria x ananassa HOM05D011367 ORTHO05D001590 1.9e-07 61.6 190 24.7
Rhsim02G0013800 Rhododendron simsii HOM05D007376 ORTHO05D026098 1.9e-07 61.6 272 23.5
RhsimUnG0155300 Rhododendron simsii HOM05D007376 ORTHO05D026098 1.9e-07 61.6 272 23.5
Aqoxy5G01956 Aquilegia oxysepala HOM05D019735 ORTHO05D019678 3.3e-07 60.8 143 28.0
Rhsim13G0048400 Rhododendron simsii HOM05D007376 ORTHO05D026098 3.3e-07 60.8 271 23.6
Aqoxy5G02161 Aquilegia oxysepala HOM05D019735 ORTHO05D019678 7.2e-07 59.7 148 28.4
Rhsim04G0174600 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.2e-07 59.7 249 23.3
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 7.2e-07 59.7 213 27.2
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.5e-07 59.3 249 22.9
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-06 58.5 249 22.9
CSS0024257 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.8e-06 57.8 123 29.3
CSS0013773 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.6e-06 57.4 124 29.0
CSS0026649 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.6e-06 57.4 124 29.0
FAN03G2725 Fragaria x ananassa HOM05D003258 ORTHO05D010103 3.6e-06 57.4 32 90.6
FAN19G2770 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.6e-06 57.4 148 27.7
Rhsim08G0211500 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.6e-06 57.4 242 23.6
FvH4_6g20108 Fragaria vesca HOM05D023564 ORTHO05D001590 6.1e-06 56.6 234 26.1
FAN13G2565 Fragaria x ananassa HOM05D003258 ORTHO05D010103 6.1e-06 56.6 32 87.5


User provided reference genes

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