Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 2.2e-163 578.9 299 100.0
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 4.0e-141 505.0 299 89.3
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 1.9e-138 496.1 303 87.5
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.9e-138 496.1 303 87.5
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 2.4e-138 495.7 303 87.8
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 2.4e-138 495.7 303 87.8
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 1.4e-114 416.8 328 72.6
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 3.9e-88 328.9 322 59.3
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 6.7e-88 328.2 311 62.4
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 2.5e-87 326.2 332 58.1
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 4.3e-87 325.5 337 58.8
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 8.2e-86 321.2 300 63.3
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 1.4e-85 320.5 311 61.4
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 2.6e-84 316.2 300 62.3
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 4.5e-84 315.5 312 60.6
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 7.7e-84 314.7 303 61.4
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 1.0e-83 314.3 300 62.0
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 1.0e-83 314.3 300 61.3
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 1.3e-83 313.9 300 61.3
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 2.2e-83 313.2 311 60.8
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 6.5e-83 311.6 300 61.3
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 1.9e-82 310.1 317 58.0
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 3.2e-82 309.3 276 62.7
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 1.2e-81 307.4 327 55.7
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 1.2e-81 307.4 293 60.8
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 1.6e-81 307.0 311 60.1
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 2.1e-81 306.6 283 63.6
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 3.6e-81 305.8 312 58.7
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 3.6e-81 305.8 298 59.7
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 6.1e-81 305.1 302 58.6
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 1.0e-80 304.3 282 62.8
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 2.3e-80 303.1 306 59.5
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 2.3e-80 303.1 282 62.1
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 3.9e-80 302.4 275 64.4
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 1.1e-79 300.8 299 57.5
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 1.1e-79 300.8 333 57.7
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 1.5e-79 300.4 275 64.0
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 1.5e-79 300.4 309 57.6
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 2.0e-79 300.1 328 54.9
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 4.4e-79 298.9 308 56.8
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 4.4e-79 298.9 281 60.5
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 5.7e-79 298.5 302 59.3
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 1.3e-78 297.4 301 59.1
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 2.8e-78 296.2 299 57.5
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 6.3e-78 295.0 313 57.8
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 8.2e-78 294.7 308 57.8
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 8.2e-78 294.7 306 59.2
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 1.1e-77 294.3 316 56.0
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 1.8e-77 293.5 311 55.6
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 1.8e-77 293.5 316 56.0
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 2.4e-77 293.1 299 58.5
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 2.4e-77 293.1 331 54.7
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 3.1e-77 292.7 276 61.2
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 5.3e-77 292.0 312 58.0
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 7.0e-77 291.6 301 58.1
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 1.5e-76 290.4 302 59.3
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 2.0e-76 290.0 298 56.0
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 1.3e-75 287.3 308 54.2
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 1.7e-75 287.0 277 60.6
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 1.7e-75 287.0 277 60.6
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 1.7e-75 287.0 277 60.6
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 1.7e-75 287.0 307 57.3
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 3.8e-75 285.8 331 53.8
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 8.5e-75 284.6 300 57.3
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 1.9e-74 283.5 277 59.9
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 2.5e-74 283.1 308 56.2
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 3.2e-74 282.7 315 52.4
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 4.2e-74 282.3 304 54.9
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 5.5e-74 282.0 274 59.9
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 7.2e-74 281.6 305 55.1
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 9.4e-74 281.2 312 54.8
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 1.2e-73 280.8 302 54.6
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 1.2e-73 280.8 277 60.3
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 1.2e-73 280.8 315 53.0
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 2.1e-73 280.0 316 54.4
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 4.7e-73 278.9 278 59.0
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 4.7e-73 278.9 316 53.8
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 6.7e-72 275.0 313 54.6
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 3.3e-71 272.7 321 54.5
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 3.7e-70 269.2 308 55.5
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 3.7e-70 269.2 352 49.4
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 6.3e-70 268.5 280 58.2
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 1.4e-69 267.3 236 62.3
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 4.5e-68 262.3 237 61.2
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 4.5e-68 262.3 311 51.1
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 2.9e-67 259.6 312 53.8
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 1.1e-66 257.7 299 52.8
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 7.2e-66 255.0 395 45.6
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 2.7e-65 253.1 301 50.2
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 3.0e-64 249.6 302 52.6
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 6.7e-64 248.4 208 63.9
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 1.2e-63 247.7 304 51.3
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 3.3e-63 246.1 309 51.5
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 2.2e-62 243.4 307 51.5
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 4.8e-62 242.3 302 51.3
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 7.7e-60 235.0 203 62.6
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 1.3e-59 234.2 304 51.0
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 2.9e-59 233.0 203 62.6
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 2.1e-57 226.9 295 49.2
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 3.0e-56 223.0 304 50.0
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 1.6e-52 210.7 136 79.4
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 9.5e-50 201.4 307 45.3
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 4.7e-49 199.1 306 45.4
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 4.1e-45 186.0 239 48.5
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 2.7e-44 183.3 149 67.8
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 1.5e-39 167.5 126 71.4
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 3.6e-33 146.4 191 48.7
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 1.4e-32 144.4 211 45.0
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 3.5e-28 129.8 83 77.1
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 6.6e-27 125.6 163 47.2
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 4.7e-25 119.4 138 50.7
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 7.5e-23 112.1 167 43.7
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 1.8e-16 90.9 138 42.8
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 1.3e-14 84.7 97 56.7
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 8.7e-11 72.0 105 47.6
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 1.5e-10 71.2 110 44.5
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 4.3e-10 69.7 231 28.6
BcaB03g13515 Brassica carinata HOM05D006579 ORTHO05D007783 2.6e-07 60.5 72 52.8


User provided reference genes

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