Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G1329 Fragaria x ananassa HOM05D007800 ORTHO05D009881 4.4e-297 1023.8 519 100.0
FAN26G3078 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.7e-293 1011.9 519 98.8
FvH4_1g07200 Fragaria vesca HOM05D007800 ORTHO05D009881 5.6e-207 724.5 408 91.4
FAN23G2336 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.2e-206 723.4 408 91.2
FAN19G0334 Fragaria x ananassa HOM05D007800 ORTHO05D009881 2.8e-206 722.2 408 90.9
RcHm_v2.0_Chr2g0093101 Rosa chinensis HOM05D007800 ORTHO05D009881 1.6e-193 679.9 408 85.5
Prupe.7G211900 Prunus persica HOM05D007800 ORTHO05D009881 1.6e-158 563.5 415 70.6
MD02G1076500 Malus domestica HOM05D007800 ORTHO05D009881 1.6e-153 547.0 415 68.0
Cfa003104 Carpinus fangiana HOM05D007800 ORTHO05D009881 2.2e-142 510.0 415 62.4
CiPaw.03G217600 Carya illinoinensis HOM05D007800 ORTHO05D009881 1.0e-139 501.1 464 57.3
Haze_25896 Corylus avellana HOM05D007800 ORTHO05D009881 2.9e-139 499.6 413 61.5
QL02p062921 Quercus lobata HOM05D007800 ORTHO05D009881 2.3e-136 490.0 415 61.7
GSVIVG01015219001 Vitis vinifera HOM05D007800 ORTHO05D009881 2.2e-131 473.4 408 59.3
CSS0047448 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 1.0e-128 464.5 416 59.4
CANSAT56G2700 Cannabis sativa HOM05D007800 ORTHO05D009881 8.8e-128 461.5 416 58.7
CSS0040388 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 1.1e-127 461.1 416 58.7
Duzib150G1500 Durio zibethinus HOM05D007800 ORTHO05D009881 8.5e-123 444.9 420 55.0
Actinidia03799 Actinidia chinensis HOM05D007800 ORTHO05D009881 1.2e-121 441.0 411 56.7
TWI32G0405 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 1.6e-121 440.7 413 55.4
Thecc.09G091400 Theobroma cacao HOM05D007800 ORTHO05D009881 2.1e-121 440.3 420 55.2
Dinv36755 Davidia involucrata HOM05D007800 ORTHO05D009881 8.0e-121 438.3 405 57.8
Ciclev10010231m.g Citrus clementina HOM05D007800 ORTHO05D009881 1.4e-120 437.6 421 54.9
TWI32G0422 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 1.4e-120 437.6 413 55.4
Gorai.010G081900 Gossypium raimondii HOM05D007800 ORTHO05D009881 3.0e-120 436.4 421 56.1
Hma1.2p1_0800F.1_g220040 Hydrangea macrophylla HOM05D007800 ORTHO05D009881 6.8e-120 435.3 413 54.2
Gohir.A06G071700 Gossypium hirsutum HOM05D007800 ORTHO05D009881 9.8e-119 431.4 421 55.3
TAR626G0221 Trochodendron aralioides HOM05D007800 ORTHO05D009881 2.8e-118 429.9 415 56.1
Cpa.g.sc93.18 Carica papaya HOM05D007800 ORTHO05D009881 8.3e-118 428.3 428 53.7
Eucgr.C00905 Eucalyptus grandis HOM05D007800 ORTHO05D009881 3.1e-117 426.4 419 54.7
Potri.006G151500 Populus trichocarpa HOM05D007800 ORTHO05D009881 3.1e-117 426.4 411 55.0
SalBow1G2412 Salvia bowleyana HOM05D007800 ORTHO05D009881 1.2e-116 424.5 411 52.6
Nitab4.5_0010222g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 1.0e-115 421.4 410 53.9
Sabra06G0120000 Salix brachista HOM05D007800 ORTHO05D009881 1.7e-115 420.6 410 54.9
Nitab4.5_0010434g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 8.0e-113 411.8 411 54.0
Oeu018234.1 Olea europaea HOM05D007800 ORTHO05D009881 2.3e-112 410.2 421 52.7
MSTRG.19524 Avicennia marina HOM05D007800 ORTHO05D009881 4.0e-112 409.5 413 55.0
Cc06_g11240 Coffea canephora HOM05D007800 ORTHO05D009881 6.8e-112 408.7 415 52.5
FAN28G0657 Fragaria x ananassa HOM05D007800 ORTHO05D009881 6.3e-110 402.1 227 91.2
DCAR_010680 Daucus carota HOM05D007800 ORTHO05D009881 1.1e-109 401.4 408 52.7
PGSC0003DMG400002319 Solanum tuberosum HOM05D007800 ORTHO05D009881 3.1e-109 399.8 412 52.4
Nn8g38899 Nelumbo nucifera HOM05D007800 ORTHO05D009881 7.0e-109 398.7 419 51.8
Solyc07g026640.3 Solanum lycopersicum HOM05D007800 ORTHO05D009881 7.0e-109 398.7 411 53.0
Sopen07g014250 Solanum pennellii HOM05D007800 ORTHO05D009881 1.0e-107 394.8 411 53.0
THA.LOC104801881 Tarenaya hassleriana HOM05D007800 ORTHO05D009881 3.8e-107 392.9 411 51.1
Migut.K00591 Erythranthe guttata HOM05D007800 ORTHO05D009881 5.6e-106 389.0 411 50.9
SGA_v2.0_scaffold23G09996 Striga asiatica HOM05D007800 ORTHO05D009881 9.5e-106 388.3 413 50.1
PGR142G2964 Punica granatum HOM05D007800 ORTHO05D009881 2.8e-105 386.7 414 48.3
Aqoxy7G01245 Aquilegia oxysepala HOM05D007800 ORTHO05D009881 4.7e-105 386.0 433 49.7
BolC3t21231H Brassica oleracea HOM05D007800 ORTHO05D009881 6.1e-105 385.6 417 49.4
BcaC01g01177 Brassica carinata HOM05D007800 ORTHO05D009881 8.0e-105 385.2 417 49.9
Thhalv10027131m.g Eutrema salsugineum HOM05D007800 ORTHO05D009881 8.0e-105 385.2 425 49.9
BcaB03g12612 Brassica carinata HOM05D007800 ORTHO05D009881 4.0e-104 382.9 424 50.5
C03p89220 Brassica napus HOM05D007800 ORTHO05D009881 4.0e-104 382.9 418 50.5
A08p19590 Brassica napus HOM05D007800 ORTHO05D009881 5.2e-104 382.5 417 49.4
HanXRQChr03g0060771 Helianthus annuus HOM05D007800 ORTHO05D009881 6.8e-104 382.1 415 48.9
Manes.16G103100 Manihot esculenta HOM05D007800 ORTHO05D009881 1.2e-103 381.3 359 55.4
AT4G29560 Arabidopsis thaliana HOM05D007800 ORTHO05D009881 2.0e-103 380.6 415 50.1
Lsat_1_v5_gn_7_37520 Lactuca sativa HOM05D007800 ORTHO05D009881 9.8e-103 378.3 419 47.7
BraA08t33918Z Brassica rapa HOM05D007800 ORTHO05D009881 1.7e-102 377.5 420 49.0
CARHR237380 Cardamine hirsuta HOM05D007800 ORTHO05D009881 1.1e-101 374.8 413 49.6
COL.COLO4_18216 Corchorus olitorius HOM05D007800 ORTHO05D009881 1.8e-101 374.0 342 55.8
Carub.0007s1100 Capsella rubella HOM05D007800 ORTHO05D009881 4.1e-101 372.9 413 50.1
AL7G22820 Arabidopsis lyrata HOM05D007800 ORTHO05D009881 2.0e-100 370.5 415 49.2
PSO063G3968 Papaver somniferum HOM05D007800 ORTHO05D009881 3.3e-98 363.2 417 50.1
MD15G1205200 Malus domestica HOM05D007800 ORTHO05D009881 5.6e-98 362.5 408 51.2
PSO832G3388 Papaver somniferum HOM05D007800 ORTHO05D009881 1.6e-97 360.9 416 49.8
Peaxi162Scf00141g00327 Petunia axillaris HOM05D007800 ORTHO05D009881 6.2e-97 359.0 407 51.1
Gohir.D06G070300 Gossypium hirsutum HOM05D007800 ORTHO05D009881 2.2e-94 350.5 367 54.2
Atru.BG.11.p Acer truncatum HOM05D007800 ORTHO05D009881 9.2e-93 345.1 343 52.8
Sc08g0008380 Simmondsia chinensis HOM05D007800 ORTHO05D009881 4.0e-88 329.7 411 46.7
ECA240G1450 Erigeron canadensis HOM05D007800 ORTHO05D009881 2.0e-87 327.4 425 47.1
MBI01_g01250_MAGBIO Magnolia biondii HOM05D007800 ORTHO05D009881 2.0e-87 327.4 422 44.3
FAN28G2802 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.6e-81 307.8 159 97.5
HPP92_005239 Vanilla planifolia HOM05D007800 ORTHO05D009881 2.2e-70 270.8 423 40.4
Lj7P673T61 Lonicera japonica HOM05D007800 ORTHO05D009881 2.8e-65 253.8 194 62.4
Zm00001eb385220 Zea mays HOM05D007800 ORTHO05D009881 1.2e-55 221.9 412 36.7
Os06g0573800 Oryza sativa ssp. japonica HOM05D007800 ORTHO05D009881 1.4e-53 214.9 413 35.4
ATR0782G161 Amborella trichopoda HOM05D007800 ORTHO05D009881 6.7e-51 206.1 489 31.7
SEGI_31551 Sequoiadendron giganteum HOM05D007800 ORTHO05D009881 1.1e-42 178.7 464 29.5
Dinv42307 Davidia involucrata HOM05D007800 ORTHO05D009881 4.8e-33 146.7 117 61.5
Pp3c4_16520 Physcomitrium patens HOM05D007800 ORTHO05D009881 3.2e-21 107.5 365 26.3
CDE05G3378 Ceratophyllum demersum HOM05D007800 ORTHO05D009881 9.4e-21 105.9 252 33.7
Mapoly0036s0155 Marchantia polymorpha HOM05D007800 ORTHO05D009881 3.0e-19 100.9 370 23.5
AagrBONN_evm.TU.Sc2ySwM_344.183 Anthoceros agrestis HOM05D007800 ORTHO05D009881 5.2e-11 73.6 180 31.7
Os09g0451133 Oryza sativa ssp. japonica HOM05D017941 ORTHO05D025961 2.4e-08 64.7 97 33.0
Os09g0451266 Oryza sativa ssp. japonica HOM05D017941 ORTHO05D025961 2.2e-06 58.2 97 30.9
SGA_v2.0_scaffold28G11970 Striga asiatica HOM05D017941 ORTHO05D025961 3.8e-06 57.4 74 37.8


User provided reference genes

Program Settings