Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G1322 Fragaria x ananassa HOM05D007420 ORTHO05D009353 9.1e-44 179.9 92 100.0
FAN23G1905 Fragaria x ananassa HOM05D007420 ORTHO05D009353 4.5e-43 177.6 92 98.9
FAN28G1248 Fragaria x ananassa HOM05D007420 ORTHO05D009353 4.5e-43 177.6 92 98.9
FAN22G2307 Fragaria x ananassa HOM05D022909 ORTHO05D009353 2.6e-38 161.8 84 97.6
FvH4_1g03930 Fragaria vesca HOM05D007420 ORTHO05D009353 1.4e-31 139.4 72 95.8
FAN19G3121 Fragaria x ananassa HOM05D007420 ORTHO05D009353 8.2e-29 130.2 68 94.1
RcHm_v2.0_Chr2g0089401 Rosa chinensis HOM05D007420 ORTHO05D009353 5.3e-28 127.5 80 80.0
MD02G1037600 Malus domestica HOM05D007420 ORTHO05D009353 1.0e-23 113.2 82 72.0
Prupe.7G237700 Prunus persica HOM05D007420 ORTHO05D009353 1.5e-22 109.4 72 77.8
MD15G1177800 Malus domestica HOM05D007420 ORTHO05D009353 4.8e-21 104.4 81 66.7
Lj4g0001906 Lotus japonicus HOM05D007420 ORTHO05D009353 4.1e-20 101.3 87 62.1
Glyma.05G010400 Glycine max HOM05D007420 ORTHO05D009353 5.4e-20 100.9 69 73.9
Actinidia22015 Actinidia chinensis HOM05D007420 ORTHO05D009353 7.0e-20 100.5 71 73.2
arahy.Tifrunner.gnm1.ann1.QR7ILI Arachis hypogaea HOM05D007420 ORTHO05D009353 9.1e-20 100.1 75 70.7
Dinv36572 Davidia involucrata HOM05D007420 ORTHO05D009353 1.2e-19 99.8 77 66.2
TPR.G9078 Trifolium pratense HOM05D007420 ORTHO05D009353 1.2e-19 99.8 68 72.1
arahy.Tifrunner.gnm1.ann1.XPL4AE Arachis hypogaea HOM05D007420 ORTHO05D009353 3.5e-19 98.2 75 69.3
DCAR_014860 Daucus carota HOM05D007420 ORTHO05D009353 3.5e-19 98.2 70 71.4
Eucgr.C01298 Eucalyptus grandis HOM05D007420 ORTHO05D009353 3.5e-19 98.2 70 72.9
Cfa003340 Carpinus fangiana HOM05D007420 ORTHO05D009353 4.5e-19 97.8 69 72.5
SalBow6G6280 Salvia bowleyana HOM05D007420 ORTHO05D009353 5.9e-19 97.4 70 70.0
Eucgr.L02717 Eucalyptus grandis HOM05D007420 ORTHO05D009353 1.3e-18 96.3 70 71.4
Oeu021594.1 Olea europaea HOM05D007420 ORTHO05D009353 1.7e-18 95.9 75 68.0
Ciclev10009973m.g Citrus clementina HOM05D007420 ORTHO05D009353 8.5e-18 93.6 69 68.1
QL02p087339 Quercus lobata HOM05D007420 ORTHO05D009353 8.5e-18 93.6 67 74.6
Haze_25622 Corylus avellana HOM05D007420 ORTHO05D009353 2.5e-17 92.0 67 71.6
Gorai.010G066200 Gossypium raimondii HOM05D007420 ORTHO05D009353 3.2e-17 91.7 70 67.1
Lalb_Chr13g0302091 Lupinus albus HOM05D007420 ORTHO05D009353 3.2e-17 91.7 75 64.0
CSS0016223 Camellia sinensis var. sinensis HOM05D007420 ORTHO05D009353 4.2e-17 91.3 67 71.6
Eucgr.C01109 Eucalyptus grandis HOM05D007420 ORTHO05D009353 5.5e-17 90.9 67 71.6
Nitab4.5_0000750g0050 Nicotiana tabacum HOM05D007420 ORTHO05D009353 5.5e-17 90.9 69 62.3
Thecc.09G120400 Theobroma cacao HOM05D007420 ORTHO05D009353 5.5e-17 90.9 75 64.0
Atru.chr7.1239 Acer truncatum HOM05D007420 ORTHO05D009353 7.2e-17 90.5 67 71.6
Migut.L01525 Erythranthe guttata HOM05D007420 ORTHO05D009353 7.2e-17 90.5 68 72.1
A07p31870 Brassica napus HOM05D007420 ORTHO05D009353 9.5e-17 90.1 85 61.2
CiPaw.03G239800 Carya illinoinensis HOM05D007420 ORTHO05D009353 9.5e-17 90.1 67 71.6
Manes.06G052500 Manihot esculenta HOM05D007420 ORTHO05D009353 9.5e-17 90.1 75 60.0
Hma1.2p1_0018F.1_g012820 Hydrangea macrophylla HOM05D007420 ORTHO05D009353 1.2e-16 89.7 70 64.3
vmacro20648 Vaccinium macrocarpon HOM05D007420 ORTHO05D009353 1.2e-16 89.7 79 63.3
SEGI_24866 Sequoiadendron giganteum HOM05D007420 ORTHO05D009353 2.1e-16 89.0 70 61.4
TWI34G1269 Tripterygium wilfordii HOM05D007420 ORTHO05D009353 2.1e-16 89.0 66 65.2
CANSAT56G4260 Cannabis sativa HOM05D007420 ORTHO05D009353 2.8e-16 88.6 67 68.7
Potri.011G024500 Populus trichocarpa HOM05D007420 ORTHO05D009353 2.8e-16 88.6 68 67.6
Aa31sc12G90 Aethionema arabicum HOM05D007420 ORTHO05D009353 3.6e-16 88.2 70 64.3
Cc06_g08970 Coffea canephora HOM05D007420 ORTHO05D009353 3.6e-16 88.2 64 70.3
Phvul.003G161000 Phaseolus vulgaris HOM05D007420 ORTHO05D009353 3.6e-16 88.2 65 69.2
Nitab4.5_0001193g0010 Nicotiana tabacum HOM05D007420 ORTHO05D009353 4.7e-16 87.8 67 61.2
THA.LOC104809007 Tarenaya hassleriana HOM05D007420 ORTHO05D009353 4.7e-16 87.8 68 67.6
Eucgr.C01288 Eucalyptus grandis HOM05D007420 ORTHO05D009353 6.1e-16 87.4 59 72.9
CDE01G0426 Ceratophyllum demersum HOM05D007420 ORTHO05D009353 8.0e-16 87.0 75 58.7
Psat4g040560 Pisum sativum HOM05D007420 ORTHO05D009353 8.0e-16 87.0 67 68.7
Sabra11G0015300 Salix brachista HOM05D007420 ORTHO05D009353 1.0e-15 86.7 68 67.6
Gohir.A06G058200 Gossypium hirsutum HOM05D007420 ORTHO05D009353 2.3e-15 85.5 67 67.2
Gohir.D06G056500 Gossypium hirsutum HOM05D007420 ORTHO05D009353 2.3e-15 85.5 67 67.2
SalBow1G2150 Salvia bowleyana HOM05D007420 ORTHO05D009353 2.3e-15 85.5 68 69.1
TWI32G1185 Tripterygium wilfordii HOM05D007420 ORTHO05D009353 2.3e-15 85.5 66 63.6
BcaB03g15440 Brassica carinata HOM05D007420 ORTHO05D009353 3.0e-15 85.1 67 70.1
BcaC08g45947 Brassica carinata HOM05D007420 ORTHO05D009353 3.0e-15 85.1 67 70.1
C06p37440 Brassica napus HOM05D007420 ORTHO05D032647 3.0e-15 85.1 67 70.1
BolC6t38847H Brassica oleracea HOM05D007420 ORTHO05D009353 3.0e-15 85.1 67 70.1
MELO3C004528.2 Cucumis melo HOM05D007420 ORTHO05D009353 3.0e-15 85.1 66 65.2
BraA07t30816Z Brassica rapa HOM05D007420 ORTHO05D009353 8.8e-15 83.6 67 68.7
Thhalv10019233m.g Eutrema salsugineum HOM05D007420 ORTHO05D009353 8.8e-15 83.6 67 68.7
Nn2g11931 Nelumbo nucifera HOM05D007420 ORTHO05D009353 8.8e-15 83.6 67 67.2
Carub.0002s1522 Capsella rubella HOM05D007420 ORTHO05D009353 1.2e-14 83.2 67 67.2
Hund09157 Selenicereus undatus HOM05D007420 ORTHO05D009353 1.2e-14 83.2 66 65.2
CAN.G1424.4 Capsicum annuum HOM05D007420 ORTHO05D009353 1.5e-14 82.8 65 61.5
PGR102G0502 Punica granatum HOM05D007420 ORTHO05D009353 1.5e-14 82.8 80 52.5
BcaB03g15439 Brassica carinata HOM05D007420 ORTHO05D009353 2.0e-14 82.4 66 68.2
Sc14g0000270 Simmondsia chinensis HOM05D007420 ORTHO05D009353 2.0e-14 82.4 64 64.1
AL2G27600 Arabidopsis lyrata HOM05D007420 ORTHO05D009353 2.6e-14 82.0 67 67.2
Sp5g23780 Schrenkiella parvula HOM05D007420 ORTHO05D009353 2.6e-14 82.0 67 67.2
HPP92_024085 Vanilla planifolia HOM05D007420 ORTHO05D009353 2.6e-14 82.0 68 63.2
Nn8g39361 Nelumbo nucifera HOM05D007420 ORTHO05D009353 3.4e-14 81.6 64 62.5
SHI28897 Sapria himalayana HOM05D007420 ORTHO05D009353 4.4e-14 81.3 66 62.1
CARHR061490 Cardamine hirsuta HOM05D007420 ORTHO05D009353 5.7e-14 80.9 67 65.7
unitig_85.g27256 Utricularia gibba HOM05D000953 ORTHO05D000231 5.7e-14 80.9 55 69.1
AT1G68680 Arabidopsis thaliana HOM05D007420 ORTHO05D009353 7.5e-14 80.5 67 65.7
CDE03G0079 Ceratophyllum demersum HOM05D007420 ORTHO05D009353 7.5e-14 80.5 75 54.7
HanXRQChr03g0062071 Helianthus annuus HOM05D007420 ORTHO05D009353 7.5e-14 80.5 67 64.2
Peaxi162Scf00361g00611 Petunia axillaris HOM05D007420 ORTHO05D009353 9.8e-14 80.1 66 62.1
Sed0006703 Sechium edule HOM05D007420 ORTHO05D009353 9.8e-14 80.1 67 65.7
Solyc07g005430.3 Solanum lycopersicum HOM05D007420 ORTHO05D009353 1.3e-13 79.7 61 62.3
Sopen07g001360 Solanum pennellii HOM05D007420 ORTHO05D009353 1.3e-13 79.7 61 62.3
CsaV3_2G002630 Cucumis sativus L. HOM05D007420 ORTHO05D009353 1.7e-13 79.3 68 61.8
ECA240G1805 Erigeron canadensis HOM05D007420 ORTHO05D009353 1.7e-13 79.3 62 62.9
PSO170G5167 Papaver somniferum HOM05D007420 ORTHO05D009353 1.7e-13 79.3 52 73.1
ClCG11G002810 Citrullus lanatus HOM05D007420 ORTHO05D009353 2.8e-13 78.6 64 64.1
Duzib150G1214 Durio zibethinus HOM05D007420 ORTHO05D009353 2.8e-13 78.6 53 69.8
EL10Ac8g18588 Beta vulgaris HOM05D007420 ORTHO05D009353 6.3e-13 77.4 75 54.7
GSVIVG01015481001 Vitis vinifera HOM05D007420 ORTHO05D009353 8.3e-13 77.0 67 59.7
Hma1.2p1_0018F.1_g012830 Hydrangea macrophylla HOM05D007420 ORTHO05D009353 1.4e-12 76.3 55 65.5
AUR62033448 Chenopodium quinoa HOM05D007420 ORTHO05D009353 7.0e-12 73.9 68 55.9
Pp3c11_6600 Physcomitrium patens HOM05D007420 ORTHO05D009353 2.0e-11 72.4 57 59.6
PGSC0003DMG401011174 Solanum tuberosum HOM05D007420 ORTHO05D009353 3.5e-11 71.6 83 49.4
Zm00001eb283090 Zea mays HOM05D007420 ORTHO05D009353 5.9e-11 70.9 79 49.4
AagrBONN_evm.TU.Sc2ySwM_362.2614 Anthoceros agrestis HOM05D007420 ORTHO05D009353 1.7e-10 69.3 76 46.1
Os05g0176600 Oryza sativa ssp. japonica HOM05D007420 ORTHO05D009353 2.3e-10 68.9 43 79.1
Mapoly0048s0106 Marchantia polymorpha HOM05D007420 ORTHO05D009353 2.9e-10 68.6 53 60.4
CBR_g3296 Chara braunii HOM05D007420 ORTHO05D009353 8.0e-08 60.5 67 46.3
Eucgr.C01292 Eucalyptus grandis HOM05D007420 ORTHO05D009353 2.0e-06 55.8 33 78.8


User provided reference genes

Program Settings