Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G0971 Fragaria x ananassa HOM05D008037 ORTHO05D004271 1.0e-72 276.6 130 100.0
FAN22G1916 Fragaria x ananassa HOM05D008037 ORTHO05D004271 1.6e-57 226.1 117 91.5
RcHm_v2.0_Chr7g0221131 Rosa chinensis HOM05D008016 ORTHO05D004271 1.7e-32 142.9 127 59.8
arahy.Tifrunner.gnm1.ann1.20TFSQ Arachis hypogaea HOM05D008037 ORTHO05D004271 3.7e-27 125.2 145 54.5
arahy.Tifrunner.gnm1.ann1.P2FSG5 Arachis hypogaea HOM05D008037 ORTHO05D004271 3.7e-27 125.2 145 54.5
arahy.Tifrunner.gnm1.ann1.LBLK2X Arachis hypogaea HOM05D008037 ORTHO05D004271 3.2e-26 122.1 145 52.4
arahy.Tifrunner.gnm1.ann1.KJ09M7 Arachis hypogaea HOM05D008037 ORTHO05D004271 5.4e-26 121.3 112 58.9
arahy.Tifrunner.gnm1.ann1.ASR258 Arachis hypogaea HOM05D008037 ORTHO05D004271 7.1e-26 120.9 145 55.2
arahy.Tifrunner.gnm1.ann1.WFJR7S Arachis hypogaea HOM05D008037 ORTHO05D004271 1.7e-24 116.3 130 55.4
COL.COLO4_33462 Corchorus olitorius HOM05D008016 ORTHO05D004271 3.0e-24 115.5 112 56.2
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 8.1e-22 107.5 106 55.7
ClCG11G009640 Citrullus lanatus HOM05D008354 ORTHO05D010055 3.4e-20 102.1 46 95.7
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 4.2e-18 95.1 115 50.4
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 1.0e-16 90.5 114 50.9
Nitab4.5_0012234g0010 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.0e-16 89.0 46 87.0
MBI08_g48225_MAGBIO Magnolia biondii HOM05D008037 ORTHO05D004271 3.9e-16 88.6 114 49.1
Lsat_1_v5_gn_2_98441 Lactuca sativa HOM05D008016 ORTHO05D004271 1.5e-15 86.7 45 86.7
Nitab4.5_0000066g0170 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.9e-15 86.3 46 87.0
Solyc11g021160.1 Solanum lycopersicum HOM05D001966 ORTHO05D010055 9.6e-15 84.0 108 44.4
COL.COLO4_03213 Corchorus olitorius HOM05D001966 ORTHO05D010986 4.0e-13 78.6 38 94.7
RcHm_v2.0_Chr2g0095251 Rosa chinensis HOM05D008016 ORTHO05D004271 2.6e-12 75.9 37 89.2
EL10As10g23963 Beta vulgaris HOM05D008037 ORTHO05D004271 1.3e-11 73.6 145 38.6
Hund25912 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-11 73.6 152 36.8
Hund27633 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-11 73.6 152 36.8
Hund27757 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-11 73.6 152 36.8
Hund27833 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-11 73.6 152 36.8
Hund28332 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-11 73.6 152 36.8
Hund28440 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-11 73.6 152 36.8
Hund28538 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-11 73.6 152 36.8
Hund28614 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-11 73.6 152 36.8
Hund28956 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-11 73.6 152 36.8
Hund28981 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-11 73.6 152 36.8
Hund29028 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-11 73.6 152 36.8
Hund29091 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-11 73.6 152 36.8
Hund29181 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-11 73.6 152 36.8
Hund29249 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-11 73.6 152 36.8
Hund29256 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-11 73.6 152 36.8
Hund29263 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-11 73.6 152 36.8
Hund29290 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-11 73.6 152 36.8
Hund29318 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-11 73.6 152 36.8
Hund29436 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-11 73.6 152 36.8
Hund29853 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-11 73.6 152 36.8
Hund30002 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-11 73.6 152 36.8
Hund30263 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-11 73.6 152 36.8
Hund30448 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-11 73.6 152 36.8
Hund30632 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-11 73.6 152 36.8
Hund30993 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-11 73.6 152 36.8
Oeu040617.1 Olea europaea HOM05D008016 ORTHO05D004271 1.7e-11 73.2 37 86.5
Sed0000516 Sechium edule HOM05D008037 ORTHO05D004271 1.7e-11 73.2 64 64.1
Solyc12g099150.1 Solanum lycopersicum HOM05D008016 ORTHO05D004271 2.2e-11 72.8 66 62.1
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 2.9e-11 72.4 32 96.9
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 2.9e-11 72.4 32 96.9
Nitab4.5_0005831g0120 Nicotiana tabacum HOM05D008354 ORTHO05D010055 4.2e-10 68.6 47 68.1
Gohir.A09G103364 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.6e-09 66.6 36 80.6
Lalb_Chr03g0039361 Lupinus albus HOM05D008016 ORTHO05D004271 1.6e-09 66.6 36 80.6
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 4.6e-09 65.1 32 90.6
Gohir.A09G101825 Gossypium hirsutum HOM05D008016 ORTHO05D004271 6.0e-09 64.7 46 65.2
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 6.0e-09 64.7 36 77.8
Potri.008G221801 Populus trichocarpa HOM05D008037 ORTHO05D004271 6.0e-09 64.7 32 87.5
Hund28446 Selenicereus undatus HOM05D008259 ORTHO05D004271 6.0e-09 64.7 61 57.4
Hund28585 Selenicereus undatus HOM05D008259 ORTHO05D004271 6.0e-09 64.7 61 57.4
Hund28944 Selenicereus undatus HOM05D008259 ORTHO05D004271 6.0e-09 64.7 61 57.4
Hund28949 Selenicereus undatus HOM05D008259 ORTHO05D004271 6.0e-09 64.7 61 57.4
Hund28959 Selenicereus undatus HOM05D008259 ORTHO05D004271 6.0e-09 64.7 61 57.4
Hund29107 Selenicereus undatus HOM05D008259 ORTHO05D004271 6.0e-09 64.7 61 57.4
Hund29184 Selenicereus undatus HOM05D008259 ORTHO05D004271 6.0e-09 64.7 61 57.4
Hund29242 Selenicereus undatus HOM05D008259 ORTHO05D004271 6.0e-09 64.7 61 57.4
Hund29271 Selenicereus undatus HOM05D008259 ORTHO05D004271 6.0e-09 64.7 61 57.4
Hund29275 Selenicereus undatus HOM05D008259 ORTHO05D004271 6.0e-09 64.7 61 57.4
Hund29279 Selenicereus undatus HOM05D008259 ORTHO05D004271 6.0e-09 64.7 61 57.4
Hund29283 Selenicereus undatus HOM05D008259 ORTHO05D004271 6.0e-09 64.7 61 57.4
Hund29451 Selenicereus undatus HOM05D008259 ORTHO05D004271 6.0e-09 64.7 61 57.4
Hund29497 Selenicereus undatus HOM05D008259 ORTHO05D004271 6.0e-09 64.7 61 57.4
Hund29785 Selenicereus undatus HOM05D008259 ORTHO05D004271 6.0e-09 64.7 61 57.4
Hund29912 Selenicereus undatus HOM05D008259 ORTHO05D004271 6.0e-09 64.7 61 57.4
Hund30004 Selenicereus undatus HOM05D008259 ORTHO05D004271 6.0e-09 64.7 61 57.4
Hund30064 Selenicereus undatus HOM05D008259 ORTHO05D004271 6.0e-09 64.7 61 57.4
Hund30203 Selenicereus undatus HOM05D008259 ORTHO05D004271 6.0e-09 64.7 61 57.4
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 6.0e-09 64.7 32 84.4
Gohir.D07G151450 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.0e-08 63.9 86 45.3
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 1.3e-08 63.5 33 84.8
Gohir.A07G174766 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.3e-08 63.5 36 75.0
Solyc09g011150.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 1.3e-08 63.5 33 84.8
CDE02G0533 Ceratophyllum demersum HOM05D008037 ORTHO05D004271 1.7e-08 63.2 32 87.5
RhsimPtG0005300 Rhododendron simsii HOM05D001966 ORTHO05D007227 2.3e-08 62.8 33 87.9
arahy.Tifrunner.gnm1.ann1.61DFKT Arachis hypogaea HOM05D008037 ORTHO05D004271 3.0e-08 62.4 32 81.2
Solyc00g500344.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 3.9e-08 62.0 31 90.3
arahy.Tifrunner.gnm1.ann1.KSIE27 Arachis hypogaea HOM05D008037 ORTHO05D004271 5.1e-08 61.6 54 57.4
arahy.Tifrunner.gnm1.ann1.XGYT8C Arachis hypogaea HOM05D008037 ORTHO05D004271 5.1e-08 61.6 32 84.4
Glyma.15G274900 Glycine max HOM05D008016 ORTHO05D004271 5.1e-08 61.6 46 63.0
Solyc04g082990.3 Solanum lycopersicum HOM05D005978 ORTHO05D004271 5.1e-08 61.6 33 84.8
SHI36397 Sapria himalayana HOM05D008037 ORTHO05D004271 6.6e-08 61.2 31 87.1
Peaxi162Scf00210g00153 Petunia axillaris HOM05D008037 ORTHO05D004271 8.7e-08 60.8 32 84.4
Zm00001eb129280 Zea mays HOM05D034373 ORTHO05D021180 8.7e-08 60.8 54 61.1
Nitab4.5_0001727g0130 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.1e-07 60.5 31 87.1
Nitab4.5_0001761g0150 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.5e-07 60.1 31 83.9
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 1.5e-07 60.1 32 84.4
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 2.5e-07 59.3 32 84.4
Gohir.A02G134102 Gossypium hirsutum HOM05D008016 ORTHO05D004271 4.3e-07 58.5 46 67.4
EL10Ac5g11360 Beta vulgaris HOM05D008037 ORTHO05D004271 7.3e-07 57.8 30 83.3
Gohir.1Z049580 Gossypium hirsutum HOM05D008016 ORTHO05D004271 7.3e-07 57.8 92 43.5
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 7.3e-07 57.8 31 90.3
VMungo1233G0001 Vigna mungo HOM05D001966 ORTHO05D010986 7.3e-07 57.8 31 90.3
Gohir.A13G086605 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.3e-06 57.0 46 60.9
CAN.G134.6 Capsicum annuum HOM05D008037 ORTHO05D004271 2.1e-06 56.2 46 60.9
Sc02g0004570 Simmondsia chinensis HOM05D008037 ORTHO05D004271 2.1e-06 56.2 30 83.3
Sopen02g009090 Solanum pennellii HOM05D008037 ORTHO05D004271 2.1e-06 56.2 32 78.1
Nitab4.5_0027992g0040 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.8e-06 55.8 32 78.1


User provided reference genes

Program Settings