Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G0904 Fragaria x ananassa HOM05D001298 ORTHO05D001110 3.5e-65 251.5 131 100.0
FAN26G1222 Fragaria x ananassa HOM05D001298 ORTHO05D001110 3.3e-39 165.2 88 97.7
FvH4_4g14840 Fragaria vesca HOM05D001298 ORTHO05D001110 3.8e-35 151.8 99 83.8
FAN12G0254 Fragaria x ananassa HOM05D001298 ORTHO05D001110 1.4e-34 149.8 99 82.8
FAN07G2278 Fragaria x ananassa HOM05D001298 ORTHO05D001110 2.4e-34 149.1 99 82.8
FAN17G1335 Fragaria x ananassa HOM05D001298 ORTHO05D001110 9.3e-34 147.1 99 82.8
RcHm_v2.0_Chr4g0417491 Rosa chinensis HOM05D001298 ORTHO05D001110 7.9e-33 144.1 101 77.2
RcHm_v2.0_Chr4g0417421 Rosa chinensis HOM05D001298 ORTHO05D001110 3.0e-32 142.1 101 76.2
CANSAT78G0642 Cannabis sativa HOM05D001298 ORTHO05D001110 2.5e-31 139.0 102 73.5
TAR636G0563 Trochodendron aralioides HOM05D001298 ORTHO05D001110 1.8e-29 132.9 103 70.9
Rhsim04G0203600 Rhododendron simsii HOM05D001298 ORTHO05D001110 1.2e-28 130.2 100 69.0
Prupe.1G153400 Prunus persica HOM05D001298 ORTHO05D001110 1.5e-28 129.8 104 67.3
ClCG06G005880 Citrullus lanatus HOM05D001298 ORTHO05D001110 9.9e-28 127.1 104 70.2
MELO3C021410.2 Cucumis melo HOM05D001298 ORTHO05D001110 9.9e-28 127.1 104 70.2
Nn4g26226 Nelumbo nucifera HOM05D001298 ORTHO05D001110 9.9e-28 127.1 103 67.0
Atru.chr4.2534 Acer truncatum HOM05D001298 ORTHO05D001110 1.7e-27 126.3 104 69.2
CiPaw.02G093700 Carya illinoinensis HOM05D001298 ORTHO05D001110 2.2e-27 125.9 106 63.2
Sed0023718 Sechium edule HOM05D001298 ORTHO05D001110 2.2e-27 125.9 104 69.2
CsaV3_6G015110 Cucumis sativus L. HOM05D001298 ORTHO05D001110 2.9e-27 125.6 103 69.9
Cpa.g.sc147.19 Carica papaya HOM05D001298 ORTHO05D001110 3.8e-27 125.2 104 67.3
MD13G1185800 Malus domestica HOM05D001298 ORTHO05D001110 4.9e-27 124.8 104 68.3
Manes.03G182500 Manihot esculenta HOM05D001298 ORTHO05D001110 6.4e-27 124.4 104 66.3
CiPaw.01G161700 Carya illinoinensis HOM05D001298 ORTHO05D001110 8.4e-27 124.0 106 62.3
COL.COLO4_20848 Corchorus olitorius HOM05D001298 ORTHO05D001110 8.4e-27 124.0 104 67.3
Cfa009359 Carpinus fangiana HOM05D001298 ORTHO05D001110 1.1e-26 123.6 107 62.6
MD16G1186600 Malus domestica HOM05D001298 ORTHO05D001110 1.1e-26 123.6 104 65.4
MSTRG.24754 Avicennia marina HOM05D001298 ORTHO05D001110 1.9e-26 122.9 112 65.2
QL06p003739 Quercus lobata HOM05D001298 ORTHO05D001110 1.9e-26 122.9 103 63.1
Oeu030325.1 Olea europaea HOM05D001298 ORTHO05D001110 2.4e-26 122.5 91 70.3
TWI53G1300 Tripterygium wilfordii HOM05D001298 ORTHO05D001110 2.4e-26 122.5 104 67.3
CSS0013745 Camellia sinensis var. sinensis HOM05D001298 ORTHO05D001110 3.2e-26 122.1 94 69.1
Hma1.2p1_0511F.1_g168990 Hydrangea macrophylla HOM05D001298 ORTHO05D001110 3.2e-26 122.1 76 81.6
PGR142G2799 Punica granatum HOM05D001298 ORTHO05D001110 3.2e-26 122.1 100 68.0
THA.LOC104818807 Tarenaya hassleriana HOM05D001298 ORTHO05D001110 3.2e-26 122.1 104 68.3
Actinidia40157 Actinidia chinensis HOM05D001298 ORTHO05D001110 5.5e-26 121.3 99 66.7
Haze_12404 Corylus avellana HOM05D001298 ORTHO05D001110 9.3e-26 120.6 107 60.7
DCAR_027179 Daucus carota HOM05D001298 ORTHO05D001110 1.6e-25 119.8 92 68.5
Aqoxy2G03300 Aquilegia oxysepala HOM05D001298 ORTHO05D001110 2.7e-25 119.0 103 66.0
CARHR080550 Cardamine hirsuta HOM05D001298 ORTHO05D001110 2.7e-25 119.0 105 63.8
GSVIVG01017908001 Vitis vinifera HOM05D001298 ORTHO05D001110 2.7e-25 119.0 104 59.6
BraA05t22917Z Brassica rapa HOM05D001298 ORTHO05D001110 4.6e-25 118.2 105 61.0
Eucgr.B01112 Eucalyptus grandis HOM05D001298 ORTHO05D001110 4.6e-25 118.2 99 65.7
Lalb_Chr18g0056191 Lupinus albus HOM05D001298 ORTHO05D001110 4.6e-25 118.2 103 61.2
Nitab4.5_0000968g0010 Nicotiana tabacum HOM05D001298 ORTHO05D001110 4.6e-25 118.2 96 67.7
Sc19g0004410 Simmondsia chinensis HOM05D001298 ORTHO05D001110 4.6e-25 118.2 80 73.8
AL3G16890 Arabidopsis lyrata HOM05D001298 ORTHO05D001110 6.0e-25 117.9 105 62.9
AT3G06050 Arabidopsis thaliana HOM05D001298 ORTHO05D001110 6.0e-25 117.9 105 62.9
Ciclev10005822m.g Citrus clementina HOM05D001298 ORTHO05D001110 6.0e-25 117.9 105 61.0
Migut.N00159 Erythranthe guttata HOM05D001298 ORTHO05D001110 6.0e-25 117.9 95 68.4
SalBow5G2912 Salvia bowleyana HOM05D001298 ORTHO05D001110 6.0e-25 117.9 102 63.7
SalBow5G3279 Salvia bowleyana HOM05D001298 ORTHO05D001110 6.0e-25 117.9 102 63.7
A05p41950 Brassica napus HOM05D001298 ORTHO05D001110 7.9e-25 117.5 105 61.0
Cc03_g03290 Coffea canephora HOM05D001298 ORTHO05D001110 7.9e-25 117.5 93 65.6
Peaxi162Scf01336g00018 Petunia axillaris HOM05D001298 ORTHO05D001110 7.9e-25 117.5 96 62.5
Potri.019G024000 Populus trichocarpa HOM05D001298 ORTHO05D001110 7.9e-25 117.5 107 63.6
Solyc01g079820.3 Solanum lycopersicum HOM05D001298 ORTHO05D001110 7.9e-25 117.5 91 70.3
CAN.G69.21 Capsicum annuum HOM05D001298 ORTHO05D001110 1.0e-24 117.1 93 68.8
Lj6g0011312 Lotus japonicus HOM05D001298 ORTHO05D001110 1.0e-24 117.1 100 62.0
Nitab4.5_0000630g0060 Nicotiana tabacum HOM05D001298 ORTHO05D001110 1.0e-24 117.1 96 66.7
Sp3g05000 Schrenkiella parvula HOM05D001298 ORTHO05D001110 1.0e-24 117.1 105 61.0
PGSC0003DMG400008994 Solanum tuberosum HOM05D001298 ORTHO05D001110 1.0e-24 117.1 91 70.3
Thecc.04G225000 Theobroma cacao HOM05D001298 ORTHO05D001110 1.0e-24 117.1 92 67.4
unitig_749.g13402 Utricularia gibba HOM05D001298 ORTHO05D001110 1.0e-24 117.1 73 75.3
Sabra19G0033900 Salix brachista HOM05D001298 ORTHO05D001110 1.8e-24 116.3 90 68.9
Sopen01g031580 Solanum pennellii HOM05D001298 ORTHO05D001110 1.8e-24 116.3 93 67.7
THA.LOC104802755 Tarenaya hassleriana HOM05D001298 ORTHO05D001110 1.8e-24 116.3 107 66.4
C05p61200 Brassica napus HOM05D001298 ORTHO05D001110 2.3e-24 115.9 105 60.0
BolC5t34780H Brassica oleracea HOM05D001298 ORTHO05D001110 2.3e-24 115.9 105 60.0
Thhalv10021549m.g Eutrema salsugineum HOM05D001298 ORTHO05D001110 2.3e-24 115.9 105 61.9
HPP92_003558 Vanilla planifolia HOM05D001298 ORTHO05D001110 2.3e-24 115.9 76 76.3
Duzib151G1052 Durio zibethinus HOM05D001298 ORTHO05D001110 3.0e-24 115.5 85 70.6
Zm00001eb128160 Zea mays HOM05D001298 ORTHO05D001110 3.0e-24 115.5 95 67.4
Aa31LG5G16540 Aethionema arabicum HOM05D001298 ORTHO05D001110 3.9e-24 115.2 100 62.0
Carub.0003s0549 Capsella rubella HOM05D001298 ORTHO05D001110 5.1e-24 114.8 105 61.9
Glyma.13G207000 Glycine max HOM05D001298 ORTHO05D001110 5.1e-24 114.8 100 61.0
Os01g0266600 Oryza sativa ssp. japonica HOM05D001298 ORTHO05D001110 5.1e-24 114.8 100 63.0
VMungo0540G1628 Vigna mungo HOM05D001298 ORTHO05D001110 5.1e-24 114.8 100 61.0
BcaC05g30062 Brassica carinata HOM05D001298 ORTHO05D001110 6.7e-24 114.4 105 61.0
Lsat_1_v5_gn_5_73880 Lactuca sativa HOM05D001298 ORTHO05D001110 6.7e-24 114.4 99 64.6
SGA_v2.0_scaffold166G38365 Striga asiatica HOM05D002130 ORTHO05D001110 8.7e-24 114.0 95 69.5
Gohir.A10G124400 Gossypium hirsutum HOM05D001298 ORTHO05D001110 1.1e-23 113.6 91 65.9
Gohir.D10G141900 Gossypium hirsutum HOM05D001298 ORTHO05D001110 1.1e-23 113.6 91 65.9
arahy.Tifrunner.gnm1.ann1.2N9FFP Arachis hypogaea HOM05D001298 ORTHO05D001110 1.5e-23 113.2 90 67.8
arahy.Tifrunner.gnm1.ann1.FJN7R5 Arachis hypogaea HOM05D001298 ORTHO05D001110 1.5e-23 113.2 90 67.8
PSO302G0118 Papaver somniferum HOM05D001298 ORTHO05D001110 1.5e-23 113.2 99 62.6
Phvul.006G151800 Phaseolus vulgaris HOM05D001298 ORTHO05D001110 1.9e-23 112.8 100 60.0
ECA234G0450 Erigeron canadensis HOM05D001298 ORTHO05D002937 2.5e-23 112.5 97 62.9
EL10As3g23297 Beta vulgaris HOM05D001298 ORTHO05D001110 3.3e-23 112.1 82 70.7
Glyma.15G105600 Glycine max HOM05D001298 ORTHO05D001110 3.3e-23 112.1 100 60.0
Ca_00630_v3 Cicer arietinum L. HOM05D001298 ORTHO05D001110 4.3e-23 111.7 99 60.6
PSO170G6057 Papaver somniferum HOM05D001298 ORTHO05D001110 5.6e-23 111.3 99 61.6
HanXRQChr12g0359601 Helianthus annuus HOM05D001298 ORTHO05D001110 9.6e-23 110.5 79 69.6
Medtr2g022660 Medicago truncatula HOM05D001298 ORTHO05D001110 2.1e-22 109.4 92 63.0
SEGI_23847 Sequoiadendron giganteum HOM05D001298 ORTHO05D001110 3.7e-22 108.6 89 61.8
Ah.09g228400 Amaranthus hybridus HOM05D001298 ORTHO05D001110 4.8e-22 108.2 83 67.5
Glyma.13G206900 Glycine max HOM05D001298 ORTHO05D001110 6.2e-22 107.8 91 60.4
Psat1g182960 Pisum sativum HOM05D001298 ORTHO05D001110 6.2e-22 107.8 97 61.9
Gorai.011G158200 Gossypium raimondii HOM05D001298 ORTHO05D001110 8.1e-22 107.5 96 62.5
TPR.G7650 Trifolium pratense HOM05D001298 ORTHO05D001110 1.8e-21 106.3 77 67.5
AUR62038066 Chenopodium quinoa HOM05D001298 ORTHO05D001110 4.0e-21 105.1 97 61.9
AUR62038194 Chenopodium quinoa HOM05D001298 ORTHO05D001110 4.0e-21 105.1 93 62.4
ATR0626G353 Amborella trichopoda HOM05D001298 ORTHO05D001110 5.3e-21 104.8 73 71.2
Phvul.006G151701 Phaseolus vulgaris HOM05D001298 ORTHO05D001110 1.5e-20 103.2 81 63.0
VMungo0540G1766 Vigna mungo HOM05D001298 ORTHO05D001110 7.6e-20 100.9 90 56.7
Mapoly0023s0016 Marchantia polymorpha HOM05D001298 ORTHO05D001110 6.5e-19 97.8 59 74.6
Pp3c11_23160 Physcomitrium patens HOM05D001298 ORTHO05D001110 5.5e-18 94.7 77 57.1
CDE02G1984 Ceratophyllum demersum HOM05D001298 ORTHO05D001110 1.2e-17 93.6 102 50.0
Lj6A573T93 Lonicera japonica HOM05D001298 ORTHO05D001110 1.9e-15 86.3 164 38.4
Lj6A576T58 Lonicera japonica HOM05D001298 ORTHO05D001110 1.9e-15 86.3 184 36.4
AagrBONN_evm.TU.Sc2ySwM_368.1613 Anthoceros agrestis HOM05D001298 ORTHO05D001110 3.3e-15 85.5 58 63.8
CBR_g11993 Chara braunii HOM05D001298 ORTHO05D001110 5.7e-15 84.7 59 66.1
SMO367G1092 Selaginella moellendorffii HOM05D001298 ORTHO05D001110 4.8e-14 81.6 58 56.9
Dinv44494 Davidia involucrata HOM05D001298 ORTHO05D001110 4.2e-10 68.6 35 85.7


User provided reference genes

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