Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G0903 Fragaria x ananassa HOM05D003644 ORTHO05D004305 2.1e-101 372.5 207 100.0
FAN26G3023 Fragaria x ananassa HOM05D003644 ORTHO05D004305 4.5e-99 364.8 207 98.1
FvH4_1g05660 Fragaria vesca HOM05D003644 ORTHO05D004305 1.2e-96 356.7 207 95.2
FAN19G0617 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.6e-96 356.3 207 95.2
FAN28G1311 Fragaria x ananassa HOM05D003644 ORTHO05D004305 3.9e-95 351.7 218 91.3
FAN23G2152 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.5e-91 339.7 218 87.6
RcHm_v2.0_Chr2g0091291 Rosa chinensis HOM05D003644 ORTHO05D004305 8.8e-71 270.8 168 86.9
Thecc.09G105500 Theobroma cacao HOM05D003644 ORTHO05D004305 7.5e-46 188.0 216 56.9
MD02G1057600 Malus domestica HOM05D003644 ORTHO05D004305 6.3e-45 184.9 213 62.9
Duzib168G0231 Durio zibethinus HOM05D003644 ORTHO05D004305 1.8e-44 183.3 214 59.8
Ciclev10010512m.g Citrus clementina HOM05D003644 ORTHO05D004305 2.0e-43 179.9 220 59.1
QL02p044635 Quercus lobata HOM05D003644 ORTHO05D004305 4.5e-43 178.7 218 58.7
GSVIVG01015346001 Vitis vinifera HOM05D003644 ORTHO05D004305 7.8e-43 177.9 217 57.1
Prupe.7G225200 Prunus persica HOM05D003644 ORTHO05D004305 2.3e-42 176.4 219 61.2
Manes.03G024200 Manihot esculenta HOM05D003644 ORTHO05D004305 1.9e-41 173.3 212 51.9
Manes.16G112500 Manihot esculenta HOM05D003644 ORTHO05D004305 1.2e-40 170.6 209 56.0
Duzib187G1156 Durio zibethinus HOM05D003644 ORTHO05D004305 2.8e-40 169.5 216 51.9
CiPaw.03G227900 Carya illinoinensis HOM05D003644 ORTHO05D004305 8.0e-40 167.9 216 55.1
Duzib150G1566 Durio zibethinus HOM05D003644 ORTHO05D004305 3.0e-39 166.0 209 54.1
Gorai.010G073900 Gossypium raimondii HOM05D003644 ORTHO05D004305 6.8e-39 164.9 210 55.2
CANSAT56G0200 Cannabis sativa HOM05D003644 ORTHO05D004305 7.5e-38 161.4 232 52.2
Haze_25785 Corylus avellana HOM05D003644 ORTHO05D004305 3.7e-37 159.1 217 53.0
Glyma.05G229100 Glycine max HOM05D003644 ORTHO05D004305 8.3e-37 157.9 211 54.5
Gohir.D06G063400 Gossypium hirsutum HOM05D003644 ORTHO05D004305 3.2e-36 156.0 207 53.6
Cpa.g.sc23.57 Carica papaya HOM05D003644 ORTHO05D004305 7.0e-36 154.8 214 51.4
THA.LOC104814562 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 7.0e-36 154.8 219 55.3
CSS0010496 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 7.8e-35 151.4 218 50.9
CSS0033414 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 7.8e-35 151.4 218 50.9
Potri.006G161100 Populus trichocarpa HOM05D003644 ORTHO05D004305 1.7e-34 150.2 214 51.4
MBI04_g14930_MAGBIO Magnolia biondii HOM05D003644 ORTHO05D004305 5.0e-34 148.7 209 50.2
MD15G1192000 Malus domestica HOM05D003644 ORTHO05D004305 5.0e-34 148.7 213 57.3
Lj2g0017641 Lotus japonicus HOM05D003644 ORTHO05D004305 6.6e-34 148.3 212 49.1
TAR624G1421 Trochodendron aralioides HOM05D003644 ORTHO05D004305 1.1e-33 147.5 208 50.5
TWI34G1832 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 1.9e-33 146.7 220 53.2
Gorai.009G026800 Gossypium raimondii HOM05D003644 ORTHO05D004305 2.5e-33 146.4 220 52.3
Gohir.D05G026700 Gossypium hirsutum HOM05D003644 ORTHO05D004305 3.3e-33 146.0 214 53.7
CsaV3_2G002110 Cucumis sativus L. HOM05D003644 ORTHO05D004305 4.3e-33 145.6 211 50.2
Potri.018G084100 Populus trichocarpa HOM05D003644 ORTHO05D004305 4.3e-33 145.6 217 49.3
VMungo0251G1747 Vigna mungo HOM05D003644 ORTHO05D004305 5.6e-33 145.2 214 49.1
ClCG11G002330 Citrullus lanatus HOM05D003644 ORTHO05D004305 1.2e-32 144.1 212 51.4
Gorai.001G007300 Gossypium raimondii HOM05D003644 ORTHO05D004305 1.6e-32 143.7 214 47.7
Nn2g11654 Nelumbo nucifera HOM05D003644 ORTHO05D004305 1.6e-32 143.7 217 50.2
Atru.chr7.1390 Acer truncatum HOM05D003644 ORTHO05D004305 2.8e-32 142.9 219 52.5
MELO3C004570.2 Cucumis melo HOM05D003644 ORTHO05D004305 2.8e-32 142.9 210 53.8
Nn3g18137 Nelumbo nucifera HOM05D003644 ORTHO05D004305 3.6e-32 142.5 222 48.6
Glyma.09G193400 Glycine max HOM05D003644 ORTHO05D004305 8.0e-32 141.4 210 49.5
Glyma.08G036100 Glycine max HOM05D003644 ORTHO05D004305 1.1e-31 141.0 210 51.0
Sed0019018 Sechium edule HOM05D003644 ORTHO05D004305 1.1e-31 141.0 212 46.2
TAR636G2793 Trochodendron aralioides HOM05D003644 ORTHO05D004305 1.1e-31 141.0 218 49.5
Gohir.A06G064800 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.3e-31 139.8 210 50.0
Phvul.002G311400 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 1.2e-30 137.5 216 47.7
PGR142G1369 Punica granatum HOM05D003644 ORTHO05D004305 2.6e-30 136.3 221 45.7
COL.COLO4_34805 Corchorus olitorius HOM05D003644 ORTHO05D004305 3.4e-30 136.0 208 50.5
CSS0008241 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 7.5e-30 134.8 219 52.5
Oeu015581.1 Olea europaea HOM05D003644 ORTHO05D004305 9.8e-30 134.4 210 47.6
Phvul.004G168350 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 9.8e-30 134.4 212 50.5
Psat1g044920 Pisum sativum HOM05D003644 ORTHO05D004305 1.3e-29 134.0 212 45.8
Gohir.A05G025200 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.7e-29 133.7 214 52.3
Gohir.A07G004600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.9e-29 132.9 186 50.0
TPR.G34913 Trifolium pratense HOM05D003644 ORTHO05D004305 3.7e-29 132.5 225 44.4
Medtr6g088280 Medicago truncatula HOM05D003644 ORTHO05D004305 4.9e-29 132.1 216 48.1
TWI32G0193 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 4.9e-29 132.1 214 53.3
Gohir.D07G007600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 6.4e-29 131.7 214 46.7
Dinv41640 Davidia involucrata HOM05D003644 ORTHO05D004305 1.1e-28 131.0 162 52.5
VMungo0464G0020 Vigna mungo HOM05D003644 ORTHO05D004305 3.2e-28 129.4 214 49.1
ClCG06G008860 Citrullus lanatus HOM05D003644 ORTHO05D004305 4.1e-28 129.0 218 50.0
Peaxi162Scf00665g00003 Petunia axillaris HOM05D003644 ORTHO05D004305 4.1e-28 129.0 212 47.6
THA.LOC104804017 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 4.1e-28 129.0 212 50.9
arahy.Tifrunner.gnm1.ann1.TDG8V6 Arachis hypogaea HOM05D003644 ORTHO05D004305 7.0e-28 128.3 225 46.7
Sabra18G0072500 Salix brachista HOM05D003644 ORTHO05D004305 7.0e-28 128.3 238 43.7
Carub.0007s1180 Capsella rubella HOM05D003644 ORTHO05D004305 1.2e-27 127.5 221 48.4
Glyma.01G145600 Glycine max HOM05D003644 ORTHO05D004305 1.2e-27 127.5 214 50.0
SalBow6G0047 Salvia bowleyana HOM05D003644 ORTHO05D004305 1.2e-27 127.5 217 51.6
MELO3C024703.2 Cucumis melo HOM05D003644 ORTHO05D004305 1.6e-27 127.1 214 50.5
Peaxi162Scf00231g00061 Petunia axillaris HOM05D003644 ORTHO05D004305 1.6e-27 127.1 212 49.5
Sed0013314 Sechium edule HOM05D003644 ORTHO05D004305 2.1e-27 126.7 206 47.1
AL3G48010 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 2.7e-27 126.3 212 50.0
Thhalv10002311m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 4.6e-27 125.6 217 48.4
DCAR_012057 Daucus carota HOM05D003644 ORTHO05D004305 6.0e-27 125.2 214 44.4
Sed0028016 Sechium edule HOM05D003644 ORTHO05D004305 1.7e-26 123.6 209 44.5
AT4G28840 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 2.3e-26 123.2 214 50.0
CsaV3_1G021830 Cucumis sativus L. HOM05D003644 ORTHO05D004305 2.3e-26 123.2 213 47.9
ECA234G2378 Erigeron canadensis HOM05D003644 ORTHO05D004305 3.0e-26 122.9 185 46.5
MSTRG.6013 Avicennia marina HOM05D003644 ORTHO05D004305 3.9e-26 122.5 208 43.8
Cc06_g10070 Coffea canephora HOM05D003644 ORTHO05D004305 6.6e-26 121.7 209 42.6
arahy.Tifrunner.gnm1.ann1.XM0XDL Arachis hypogaea HOM05D003644 ORTHO05D004305 8.6e-26 121.3 225 48.0
Hma1.2p1_0945F.1_g240090 Hydrangea macrophylla HOM05D003644 ORTHO05D004305 1.5e-25 120.6 207 47.3
PGSC0003DMG400000374 Solanum tuberosum HOM05D003644 ORTHO05D004305 2.5e-25 119.8 207 46.4
BolC7t46126H Brassica oleracea HOM05D003644 ORTHO05D004305 3.3e-25 119.4 211 44.1
A03p58450 Brassica napus HOM05D003644 ORTHO05D004305 5.6e-25 118.6 211 44.1
Sp3g33380 Schrenkiella parvula HOM05D003644 ORTHO05D004305 5.6e-25 118.6 221 47.5
BcaC07g41224 Brassica carinata HOM05D003644 ORTHO05D004305 7.3e-25 118.2 215 43.7
Sp7g26840 Schrenkiella parvula HOM05D003644 ORTHO05D004305 7.3e-25 118.2 213 51.2
C08p42300 Brassica napus HOM05D003644 ORTHO05D004305 9.5e-25 117.9 215 43.7
BolC8t51790H Brassica oleracea HOM05D003644 ORTHO05D004305 9.5e-25 117.9 215 43.7
BcaC06g32601 Brassica carinata HOM05D003644 ORTHO05D004305 2.1e-24 116.7 211 43.1
A09p59020 Brassica napus HOM05D003644 ORTHO05D004305 2.8e-24 116.3 212 41.5
BraA09t41288Z Brassica rapa HOM05D003644 ORTHO05D004305 2.8e-24 116.3 212 41.5
C07p56470 Brassica napus HOM05D003644 ORTHO05D004305 4.7e-24 115.5 211 43.1
A01p09070 Brassica napus HOM05D003644 ORTHO05D004305 6.2e-24 115.2 211 41.7
C01p10620 Brassica napus HOM05D003644 ORTHO05D004305 6.2e-24 115.2 210 41.0
BraA01t00855Z Brassica rapa HOM05D003644 ORTHO05D004305 6.2e-24 115.2 210 41.0
BolC1t01024H Brassica oleracea HOM05D003644 ORTHO05D004305 1.4e-23 114.0 210 40.5
CARHR110580 Cardamine hirsuta HOM05D003644 ORTHO05D004305 2.3e-23 113.2 212 45.8
Sopen12g003210 Solanum pennellii HOM05D003644 ORTHO05D004305 3.1e-23 112.8 207 45.4
PGSC0003DMG400003139 Solanum tuberosum HOM05D003644 ORTHO05D004305 8.9e-23 111.3 213 43.2
Lalb_Chr22g0352641 Lupinus albus HOM05D003644 ORTHO05D004305 1.3e-21 107.5 223 49.8
PGR102G0050 Punica granatum HOM05D003644 ORTHO05D004305 1.3e-21 107.5 217 48.8
Sopen07g007520 Solanum pennellii HOM05D003644 ORTHO05D004305 1.7e-21 107.1 210 46.7
Hund09225 Selenicereus undatus HOM05D003644 ORTHO05D004305 1.1e-20 104.4 217 44.7
BcaNung01359 Brassica carinata HOM05D003644 ORTHO05D004305 2.4e-20 103.2 182 45.1
AUR62010940 Chenopodium quinoa HOM05D003644 ORTHO05D004305 3.2e-20 102.8 217 38.2
BcaC09g51666 Brassica carinata HOM05D003644 ORTHO05D004305 1.6e-19 100.5 181 42.0
Hund09226 Selenicereus undatus HOM05D003644 ORTHO05D004305 2.1e-19 100.1 202 40.1
PSO566G0277 Papaver somniferum HOM05D003644 ORTHO05D004305 6.0e-19 98.6 214 46.7
CAN.G1774.6 Capsicum annuum HOM05D003644 ORTHO05D004305 7.8e-19 98.2 178 43.8
arahy.Tifrunner.gnm1.ann1.R9ZCFD Arachis hypogaea HOM05D003644 ORTHO05D004305 1.7e-18 97.1 156 52.6
BolC7t40541H Brassica oleracea HOM05D003644 ORTHO05D004305 1.7e-18 97.1 216 41.7
arahy.Tifrunner.gnm1.ann1.X7P2RE Arachis hypogaea HOM05D003644 ORTHO05D004305 3.0e-18 96.3 173 41.0
PSO782G2161 Papaver somniferum HOM05D003644 ORTHO05D004305 3.9e-18 95.9 214 45.8
Lalb_Chr05g0223051 Lupinus albus HOM05D003644 ORTHO05D004305 6.6e-18 95.1 170 48.2
MSTRG.19571 Avicennia marina HOM05D003644 ORTHO05D004305 8.6e-18 94.7 210 44.8
HanXRQChr12g0358181 Helianthus annuus HOM05D003644 ORTHO05D004305 1.5e-17 94.0 180 41.1
Carub.0003s3436 Capsella rubella HOM05D003644 ORTHO05D004305 1.9e-17 93.6 212 43.4
DCAR_010477 Daucus carota HOM05D003644 ORTHO05D004305 1.9e-17 93.6 207 39.1
Lsat_1_v5_gn_8_96040 Lactuca sativa HOM05D003644 ORTHO05D004305 5.6e-17 92.0 134 49.3
C09p15050 Brassica napus HOM05D003644 ORTHO05D004305 7.3e-17 91.7 170 47.6
Hund26238 Selenicereus undatus HOM05D003644 ORTHO05D004305 7.3e-17 91.7 210 34.8
AT2G20080 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 9.5e-17 91.3 212 42.5
EL10Ac8g18428 Beta vulgaris HOM05D003644 ORTHO05D004305 1.2e-16 90.9 218 42.2
Aa31LG8G17030 Aethionema arabicum HOM05D003644 ORTHO05D004305 1.6e-16 90.5 188 41.0
BcaNung04091 Brassica carinata HOM05D003644 ORTHO05D004305 1.6e-16 90.5 215 43.3
Aa31LG2G21540 Aethionema arabicum HOM05D003644 ORTHO05D004305 2.1e-16 90.1 182 50.0
C07p01040 Brassica napus HOM05D003644 ORTHO05D004305 2.1e-16 90.1 210 40.5
Thhalv10026355m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 2.1e-16 90.1 208 38.0
A07p00580 Brassica napus HOM05D003644 ORTHO05D004305 2.8e-16 89.7 209 40.2
Oeu002262.2 Olea europaea HOM05D003644 ORTHO05D004305 4.7e-16 89.0 138 48.6
BcaC07g41225 Brassica carinata HOM05D003644 ORTHO05D004305 8.1e-16 88.2 213 36.6
Actinidia20403 Actinidia chinensis HOM05D003644 ORTHO05D004305 1.4e-15 87.4 204 41.2
BcaB08g34898 Brassica carinata HOM05D003644 ORTHO05D004305 1.4e-15 87.4 215 36.3
Lalb_Chr16g0388081 Lupinus albus HOM05D003644 ORTHO05D004305 1.8e-15 87.0 120 48.3
Sc08g0007690 Simmondsia chinensis HOM05D003644 ORTHO05D004305 6.8e-15 85.1 209 40.2
Actinidia09436 Actinidia chinensis HOM05D003644 ORTHO05D004305 8.9e-15 84.7 218 39.4
HanXRQChr14g0449921 Helianthus annuus HOM05D003644 ORTHO05D004305 2.0e-14 83.6 182 43.4
Sc18g0001380 Simmondsia chinensis HOM05D003644 ORTHO05D004305 4.9e-13 79.0 212 34.9
A09p12690 Brassica napus HOM05D003644 ORTHO05D004305 6.4e-13 78.6 218 38.1
COL.COLO4_17464 Corchorus olitorius HOM05D003644 ORTHO05D004305 1.1e-12 77.8 177 39.0
BcaC06g36690 Brassica carinata HOM05D003644 ORTHO05D004305 1.4e-12 77.4 112 47.3
TPR.G23503 Trifolium pratense HOM05D003644 ORTHO05D004305 1.4e-12 77.4 177 39.5
BcaC04g22808 Brassica carinata HOM05D003644 ORTHO05D004305 1.9e-12 77.0 218 38.5
BolC9t54408H Brassica oleracea HOM05D003644 ORTHO05D004305 1.9e-12 77.0 218 38.5
BcaB03g16807 Brassica carinata HOM05D003644 ORTHO05D004305 2.4e-12 76.6 211 36.0
BraA07t27854Z Brassica rapa HOM05D003644 ORTHO05D004305 2.4e-12 76.6 135 44.4
Actinidia32668 Actinidia chinensis HOM05D003644 ORTHO05D004305 3.2e-12 76.3 143 44.8
Aqoxy7G01525 Aquilegia oxysepala HOM05D003644 ORTHO05D004305 1.6e-11 73.9 212 35.8
Nitab4.5_0014820g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 2.1e-11 73.6 144 45.1
Zm00001eb156860 Zea mays HOM05D003644 ORTHO05D004305 6.0e-11 72.0 185 35.7
Ah.09g230900 Amaranthus hybridus HOM05D003644 ORTHO05D004305 7.8e-11 71.6 202 37.6
Solyc12g007240.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 7.8e-11 71.6 151 39.7
Lsat_1_v5_gn_5_147641 Lactuca sativa HOM05D003644 ORTHO05D004305 3.0e-10 69.7 128 49.2
Migut.K00491 Erythranthe guttata HOM05D003644 ORTHO05D004305 3.9e-10 69.3 211 37.9
Zm00001eb360290 Zea mays HOM05D003644 ORTHO05D004305 6.6e-10 68.6 183 35.5
BraA09t36915Z Brassica rapa HOM05D003644 ORTHO05D004305 3.3e-09 66.2 62 64.5
CARHR236630 Cardamine hirsuta HOM05D003644 ORTHO05D004305 7.3e-09 65.1 83 60.2
AL7G23640 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 1.2e-08 64.3 121 43.8
Rhsim05G0043500 Rhododendron simsii HOM05D003644 ORTHO05D004305 2.8e-08 63.2 224 31.2
Nitab4.5_0002431g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 3.6e-08 62.8 99 48.5
Solyc07g018370.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 3.6e-08 62.8 127 46.5
Eucgr.C01280 Eucalyptus grandis HOM05D003644 ORTHO05D004305 4.7e-08 62.4 212 34.4
unitig_578.g15927 Utricularia gibba HOM05D003644 ORTHO05D004305 4.7e-08 62.4 98 42.9
HPP92_024624 Vanilla planifolia HOM05D003644 ORTHO05D004305 8.1e-08 61.6 183 35.5
Oeu018442.1 Olea europaea HOM05D003644 ORTHO05D004305 2.4e-07 60.1 76 55.3
Os05g0559316 Oryza sativa ssp. japonica HOM05D003644 ORTHO05D004305 2.4e-07 60.1 81 45.7
Psat7g014640 Pisum sativum HOM05D003644 ORTHO05D004305 3.1e-07 59.7 173 35.8
HPP92_019983 Vanilla planifolia HOM05D003644 ORTHO05D004305 3.1e-07 59.7 184 34.2
BcaB03g16801 Brassica carinata HOM05D003644 ORTHO05D004305 3.4e-06 56.2 30 83.3
Nitab4.5_0001004g0030 Nicotiana tabacum HOM05D003644 ORTHO05D004305 7.6e-06 55.1 135 40.7
Os01g0676900 Oryza sativa ssp. japonica HOM05D003644 ORTHO05D004305 7.6e-06 55.1 181 29.8


User provided reference genes

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