Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 7.5e-105 384.0 217 100.0
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 5.4e-103 377.9 217 98.2
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 2.0e-102 375.9 217 97.7
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.0e-101 373.6 217 97.2
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 8.0e-83 310.8 173 97.7
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 4.9e-80 301.6 221 81.4
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 4.9e-64 248.4 219 68.0
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 2.7e-62 242.7 208 69.7
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 3.9e-61 238.8 210 65.2
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 6.6e-61 238.0 219 65.8
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 1.5e-60 236.9 223 63.7
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 5.6e-60 235.0 202 66.3
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 1.1e-58 230.7 206 65.5
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 1.8e-58 229.9 219 62.6
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 4.0e-58 228.8 215 63.3
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 5.2e-58 228.4 221 62.4
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 6.9e-58 228.0 220 61.8
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.2e-57 227.3 226 63.3
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 1.2e-57 227.3 207 64.3
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 2.0e-57 226.5 211 63.0
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 4.4e-57 225.3 197 68.0
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 9.9e-57 224.2 212 62.7
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 1.3e-56 223.8 221 61.5
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 1.7e-56 223.4 208 63.0
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 1.7e-56 223.4 208 62.0
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 1.7e-56 223.4 202 64.9
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 2.2e-56 223.0 211 64.0
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 3.8e-56 222.2 226 61.5
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 4.9e-56 221.9 216 62.5
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 6.4e-56 221.5 216 62.5
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 6.4e-56 221.5 219 62.1
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 1.4e-55 220.3 197 65.5
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 1.4e-55 220.3 209 63.2
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 1.4e-55 220.3 209 63.2
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 1.9e-55 219.9 224 59.8
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 1.9e-55 219.9 206 63.6
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 1.9e-55 219.9 219 62.6
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 2.4e-55 219.5 197 66.0
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 4.2e-55 218.8 217 61.3
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 4.2e-55 218.8 220 61.8
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 2.1e-54 216.5 197 64.5
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 2.7e-54 216.1 213 62.0
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 2.7e-54 216.1 218 60.1
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 3.5e-54 215.7 205 61.5
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 3.5e-54 215.7 223 60.5
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 4.6e-54 215.3 209 62.2
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 4.6e-54 215.3 206 61.2
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 4.6e-54 215.3 171 73.1
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 1.3e-53 213.8 243 57.6
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 3.0e-53 212.6 215 59.5
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 3.0e-53 212.6 222 57.7
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 3.9e-53 212.2 220 58.6
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 1.5e-52 210.3 207 59.9
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 1.9e-52 209.9 211 57.3
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 5.6e-52 208.4 221 57.9
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 5.6e-52 208.4 211 57.3
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 5.6e-52 208.4 226 58.0
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 9.6e-52 207.6 217 55.3
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 2.8e-51 206.1 217 55.3
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 3.1e-50 202.6 221 56.6
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 9.0e-50 201.1 200 57.5
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 1.2e-49 200.7 174 65.5
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 2.0e-49 199.9 220 55.9
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 4.5e-49 198.7 206 58.7
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 9.9e-49 197.6 199 60.3
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 1.3e-48 197.2 219 56.6
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 1.7e-48 196.8 219 54.3
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 1.7e-48 196.8 179 62.0
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 2.9e-48 196.1 201 57.7
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 3.8e-48 195.7 224 55.8
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 4.9e-48 195.3 200 59.5
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 4.9e-48 195.3 147 74.1
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 1.9e-47 193.4 173 61.8
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 4.2e-47 192.2 216 53.7
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 5.4e-47 191.8 173 65.3
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.2e-46 190.7 202 59.4
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 1.6e-46 190.3 219 53.0
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 2.1e-46 189.9 171 62.0
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.1e-46 189.9 112 97.3
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 2.7e-46 189.5 173 63.6
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 3.5e-46 189.1 173 65.9
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 6.0e-46 188.3 174 63.2
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 6.0e-46 188.3 174 63.2
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 6.0e-46 188.3 174 63.2
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 6.0e-46 188.3 174 63.2
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 1.0e-45 187.6 173 65.3
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 1.0e-45 187.6 173 65.3
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 1.8e-45 186.8 172 64.5
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 2.3e-45 186.4 173 61.8
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 3.0e-45 186.0 222 53.6
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 3.0e-45 186.0 193 57.0
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 3.9e-45 185.7 198 57.6
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 5.1e-45 185.3 191 59.7
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 5.1e-45 185.3 220 54.5
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 6.7e-45 184.9 274 47.1
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 2.5e-44 183.0 223 53.4
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 7.4e-44 181.4 179 63.1
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 1.6e-43 180.3 171 60.8
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 2.1e-43 179.9 206 56.8
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 3.1e-42 176.0 173 56.6
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 3.1e-42 176.0 207 53.6
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 4.0e-42 175.6 236 48.7
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 5.3e-42 175.3 208 53.8
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 9.0e-42 174.5 134 73.1
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 1.2e-41 174.1 238 48.7
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 1.5e-41 173.7 147 63.9
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 3.4e-41 172.6 145 65.5
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 1.2e-38 164.1 187 54.0
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 2.4e-34 149.8 165 55.2
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 1.4e-31 140.6 157 52.9
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 1.9e-31 140.2 173 53.8
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 4.2e-31 139.0 223 41.3
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 9.3e-31 137.9 160 53.1
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 3.5e-30 136.0 138 63.0
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 1.0e-29 134.4 142 50.7
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 3.0e-29 132.9 140 59.3
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 2.5e-28 129.8 128 60.9
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 3.7e-27 125.9 128 58.6
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 4.8e-27 125.6 143 49.7
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 7.2e-23 111.7 144 45.1
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 7.4e-20 101.7 103 51.5
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 4.8e-19 99.0 111 50.5
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 1.6e-14 84.0 202 37.1
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 3.9e-13 79.3 75 58.7
Cre06.g256250 Chlamydomonas reinhardtii HOM05D006257 ORTHO05D007708 6.1e-06 55.5 153 28.1


User provided reference genes

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