Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G0798 Fragaria x ananassa HOM05D000316 ORTHO05D203482 7.5e-33 143.3 73 100.0
FAN21G0115 Fragaria x ananassa HOM05D000316 ORTHO05D001978 4.7e-19 97.4 54 88.9
FvH4_2g28760 Fragaria vesca HOM05D000316 ORTHO05D001978 4.7e-11 70.9 50 78.0
FAN15G3703 Fragaria x ananassa HOM05D000316 ORTHO05D001978 4.7e-11 70.9 50 78.0
FAN24G0952 Fragaria x ananassa HOM05D000316 ORTHO05D001978 4.7e-11 70.9 50 78.0
FAN27G0690 Fragaria x ananassa HOM05D000316 ORTHO05D001978 4.7e-11 70.9 50 78.0
FAN20G1700 Fragaria x ananassa HOM05D000316 ORTHO05D001978 5.2e-10 67.4 50 76.0
Prupe.1G483700 Prunus persica HOM05D000316 ORTHO05D001978 5.2e-10 67.4 50 76.0
MD15G1128400 Malus domestica HOM05D000316 ORTHO05D001978 1.5e-09 65.9 50 74.0
MD08G1157300 Malus domestica HOM05D000316 ORTHO05D001978 5.8e-09 63.9 50 74.0
RcHm_v2.0_Chr6g0297521 Rosa chinensis HOM05D000316 ORTHO05D001978 1.3e-08 62.8 46 73.9
CANSAT25G1966 Cannabis sativa HOM05D000316 ORTHO05D001978 2.9e-08 61.6 50 70.0
Migut.A00021 Erythranthe guttata HOM05D000316 ORTHO05D001978 4.9e-08 60.8 55 60.0
CiPaw.07G225500 Carya illinoinensis HOM05D000316 ORTHO05D001978 1.1e-07 59.7 51 66.7
ClCG08G013460 Citrullus lanatus HOM05D000316 ORTHO05D001978 1.4e-07 59.3 50 64.0
MELO3C011273.2 Cucumis melo HOM05D000316 ORTHO05D001978 1.4e-07 59.3 50 64.0
CsaV3_2G032210 Cucumis sativus L. HOM05D000316 ORTHO05D001978 1.4e-07 59.3 50 64.0
CiPaw.08G009600 Carya illinoinensis HOM05D000316 ORTHO05D001978 1.9e-07 58.9 51 66.7
Dinv05010 Davidia involucrata HOM05D000316 ORTHO05D001978 1.9e-07 58.9 50 68.0
Dinv18197 Davidia involucrata HOM05D000316 ORTHO05D001978 1.9e-07 58.9 50 68.0
Actinidia14590 Actinidia chinensis HOM05D000316 ORTHO05D001978 4.1e-07 57.8 49 67.3
Haze_21488 Corylus avellana HOM05D001612 ORTHO05D002104 4.1e-07 57.8 51 64.7
Gohir.A06G099300 Gossypium hirsutum HOM05D000316 ORTHO05D001978 4.1e-07 57.8 49 67.3
Oeu053106.2 Olea europaea HOM05D000316 ORTHO05D001978 5.4e-07 57.4 51 64.7
Rhsim07G0160600 Rhododendron simsii HOM05D000316 ORTHO05D001978 5.4e-07 57.4 50 66.0
Sed0009444 Sechium edule HOM05D000316 ORTHO05D001978 5.4e-07 57.4 50 66.0
Sc09g0010280 Simmondsia chinensis HOM05D000316 ORTHO05D001978 5.4e-07 57.4 50 64.0
TAR383G0145 Trochodendron aralioides HOM05D000316 ORTHO05D001978 5.4e-07 57.4 50 66.0
COL.COLO4_18885 Corchorus olitorius HOM05D000316 ORTHO05D001978 7.0e-07 57.0 50 66.0
Thecc.09G021400 Theobroma cacao HOM05D000316 ORTHO05D001978 7.0e-07 57.0 50 66.0
Ciclev10008816m.g Citrus clementina HOM05D000316 ORTHO05D001978 9.2e-07 56.6 50 66.0
Gohir.D06G101500 Gossypium hirsutum HOM05D000316 ORTHO05D001978 9.2e-07 56.6 49 65.3
Gorai.010G116400 Gossypium raimondii HOM05D000316 ORTHO05D001978 9.2e-07 56.6 49 65.3
ECA233G5357 Erigeron canadensis HOM05D000316 ORTHO05D001978 1.2e-06 56.2 50 64.0
Oeu012287.1 Olea europaea HOM05D000316 ORTHO05D001978 1.2e-06 56.2 51 62.7
GSVIVG01035952001 Vitis vinifera HOM05D000316 ORTHO05D001978 1.2e-06 56.2 55 60.0
Atru.chr7.2467 Acer truncatum HOM05D000316 ORTHO05D001978 1.6e-06 55.8 50 64.0
Duzib168G2356 Durio zibethinus HOM05D000316 ORTHO05D001978 1.6e-06 55.8 50 64.0
Sed0022062 Sechium edule HOM05D000316 ORTHO05D001978 1.6e-06 55.8 50 62.0
SGA_v2.0_scaffold20G09099 Striga asiatica HOM05D000316 ORTHO05D001978 1.6e-06 55.8 59 57.6
SGA_v2.0_scaffold254G45215 Striga asiatica HOM05D000316 ORTHO05D001978 1.6e-06 55.8 59 57.6
Cpa.g.sc187.4 Carica papaya HOM05D000316 ORTHO05D001978 2.0e-06 55.5 59 57.6
Manes.03G012800 Manihot esculenta HOM05D000316 ORTHO05D001978 2.0e-06 55.5 50 64.0
CSS0019323 Camellia sinensis var. sinensis HOM05D000316 ORTHO05D001978 2.7e-06 55.1 50 64.0
CSS0037842 Camellia sinensis var. sinensis HOM05D000316 ORTHO05D001978 2.7e-06 55.1 50 64.0
QL02p021072 Quercus lobata HOM05D000316 ORTHO05D001978 2.7e-06 55.1 51 60.8
Sc23g0006650 Simmondsia chinensis HOM05D000316 ORTHO05D001978 2.7e-06 55.1 50 62.0
CANSAT80G0900 Cannabis sativa HOM05D000316 ORTHO05D001978 3.5e-06 54.7 51 58.8
CANSAT80G1541 Cannabis sativa HOM05D000316 ORTHO05D001978 3.5e-06 54.7 51 58.8
EL10Ac2g04184 Beta vulgaris HOM05D000316 ORTHO05D001978 4.6e-06 54.3 46 65.2
Ca_13035_v3 Cicer arietinum L. HOM05D000467 ORTHO05D001978 4.6e-06 54.3 50 64.0
Nn8g39594 Nelumbo nucifera HOM05D000316 ORTHO05D001978 4.6e-06 54.3 49 61.2
Eucgr.C01711 Eucalyptus grandis HOM05D000316 ORTHO05D001978 6.0e-06 53.9 46 63.0
Lj7A726G24 Lonicera japonica HOM05D000316 ORTHO05D001978 6.0e-06 53.9 50 62.0
MSTRG.1730 Avicennia marina HOM05D000316 ORTHO05D001978 7.8e-06 53.5 50 60.0
Gorai.004G292900 Gossypium raimondii HOM05D000316 ORTHO05D001978 7.8e-06 53.5 50 60.0
Nitab4.5_0003389g0020 Nicotiana tabacum HOM05D000316 ORTHO05D001978 7.8e-06 53.5 50 60.0
Peaxi162Scf00136g01214 Petunia axillaris HOM05D000316 ORTHO05D001978 7.8e-06 53.5 50 60.0


User provided reference genes

Program Settings