Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G0787 Fragaria x ananassa HOM05D004917 ORTHO05D005954 1.1e-142 510.0 260 100.0
FvH4_1g18250 Fragaria vesca HOM05D004917 ORTHO05D005954 1.2e-136 490.0 260 94.6
FAN19G2004 Fragaria x ananassa HOM05D004917 ORTHO05D005954 4.3e-131 471.5 251 94.4
RcHm_v2.0_Chr2g0108761 Rosa chinensis HOM05D004917 ORTHO05D005954 2.9e-127 458.8 264 89.4
FAN23G1748 Fragaria x ananassa HOM05D004917 ORTHO05D005954 4.9e-111 404.8 260 80.8
Prupe.6G216800 Prunus persica HOM05D004917 ORTHO05D005954 1.1e-110 403.7 266 80.1
FvH4_1g18230 Fragaria vesca HOM05D004917 ORTHO05D005954 4.1e-110 401.7 260 80.4
FAN19G0182 Fragaria x ananassa HOM05D004917 ORTHO05D005954 4.1e-110 401.7 260 80.4
RcHm_v2.0_Chr2g0108751 Rosa chinensis HOM05D004917 ORTHO05D005954 9.6e-107 390.6 260 78.5
MD02G1189600 Malus domestica HOM05D004917 ORTHO05D005954 6.4e-103 377.9 266 75.9
Hma1.2p1_0424F.1_g150480 Hydrangea macrophylla HOM05D004917 ORTHO05D005954 1.3e-98 363.6 258 70.5
TAR628G1580 Trochodendron aralioides HOM05D004917 ORTHO05D005954 3.4e-96 355.5 263 71.1
Atru.chr3.1060 Acer truncatum HOM05D004917 ORTHO05D005954 5.8e-96 354.8 273 68.5
Eucgr.H02332 Eucalyptus grandis HOM05D004917 ORTHO05D005954 9.9e-96 354.0 261 70.9
Sabra14G0006700 Salix brachista HOM05D004917 ORTHO05D005954 9.9e-96 354.0 197 82.7
Duzib147G0189 Durio zibethinus HOM05D004917 ORTHO05D005954 3.8e-95 352.1 246 70.7
FAN26G1896 Fragaria x ananassa HOM05D004917 ORTHO05D005954 1.1e-94 350.5 260 73.5
Potri.014G012100 Populus trichocarpa HOM05D004917 ORTHO05D005954 1.1e-94 350.5 269 66.9
Cc07_g07360 Coffea canephora HOM05D004917 ORTHO05D005954 1.2e-93 347.1 255 67.8
Lj4g0024725 Lotus japonicus HOM05D004917 ORTHO05D005954 1.6e-93 346.7 255 70.6
GSVIVG01007444001 Vitis vinifera HOM05D004917 ORTHO05D005954 1.6e-93 346.7 261 68.2
Aqoxy1G00260 Aquilegia oxysepala HOM05D004917 ORTHO05D005954 2.1e-93 346.3 266 68.8
GSVIVG01004399001 Vitis vinifera HOM05D004917 ORTHO05D005954 2.7e-93 345.9 261 69.3
VMungo0251G1412 Vigna mungo HOM05D004917 ORTHO05D005954 3.5e-93 345.5 240 71.7
QL06p038930 Quercus lobata HOM05D004917 ORTHO05D005954 4.6e-93 345.1 273 66.3
Medtr4g097500 Medicago truncatula HOM05D004917 ORTHO05D005954 1.0e-92 344.0 238 70.2
CANSAT01G2436 Cannabis sativa HOM05D004917 ORTHO05D005954 1.8e-92 343.2 267 69.3
Ciclev10026314m.g Citrus clementina HOM05D004917 ORTHO05D005954 5.1e-92 341.7 220 74.5
Psat4g080360 Pisum sativum HOM05D004917 ORTHO05D005954 5.1e-92 341.7 239 70.3
Cpa.g.sc673.2 Carica papaya HOM05D004917 ORTHO05D005954 1.1e-91 340.5 262 67.9
Ca_22095_v3 Cicer arietinum L. HOM05D004917 ORTHO05D005954 1.9e-91 339.7 238 71.4
Eucgr.H02333 Eucalyptus grandis HOM05D004917 ORTHO05D005954 1.9e-91 339.7 258 72.1
FvH4_1g18251 Fragaria vesca HOM05D004917 ORTHO05D005954 1.9e-91 339.7 199 81.9
PSO017G2968 Papaver somniferum HOM05D004917 ORTHO05D005954 2.5e-91 339.3 264 69.7
Thecc.01G076300 Theobroma cacao HOM05D004917 ORTHO05D005954 2.5e-91 339.3 197 80.7
Sc07g0000430 Simmondsia chinensis HOM05D004917 ORTHO05D005954 3.3e-91 339.0 257 68.1
CiPaw.01G001900 Carya illinoinensis HOM05D004917 ORTHO05D005954 7.4e-91 337.8 258 67.8
Glyma.17G158500 Glycine max HOM05D004917 ORTHO05D005954 9.6e-91 337.4 239 68.2
PGSC0003DMG400003322 Solanum tuberosum HOM05D004917 ORTHO05D005954 9.6e-91 337.4 256 67.2
FAN28G2407 Fragaria x ananassa HOM05D004917 ORTHO05D005954 1.3e-90 337.0 224 76.3
Gohir.D10G098900 Gossypium hirsutum HOM05D004917 ORTHO05D005954 1.3e-90 337.0 247 68.4
Gorai.011G108500 Gossypium raimondii HOM05D004917 ORTHO05D005954 1.3e-90 337.0 247 68.8
Cfa004388 Carpinus fangiana HOM05D004917 ORTHO05D005954 1.6e-90 336.7 256 67.2
Sopen02g014680 Solanum pennellii HOM05D004917 ORTHO05D005954 1.6e-90 336.7 256 67.2
Lsat_1_v5_gn_4_160020 Lactuca sativa HOM05D004917 ORTHO05D005954 2.1e-90 336.3 251 66.5
Manes.13G109000 Manihot esculenta HOM05D004917 ORTHO05D005954 2.1e-90 336.3 263 66.9
COL.COLO4_11616 Corchorus olitorius HOM05D004917 ORTHO05D005954 3.7e-90 335.5 263 64.6
Glyma.17G158400 Glycine max HOM05D004917 ORTHO05D005954 3.7e-90 335.5 246 67.5
arahy.Tifrunner.gnm1.ann1.1K25L2 Arachis hypogaea HOM05D004917 ORTHO05D005954 6.2e-90 334.7 253 68.0
Gohir.A10G089200 Gossypium hirsutum HOM05D004917 ORTHO05D005954 6.2e-90 334.7 247 68.0
Actinidia16409 Actinidia chinensis HOM05D004917 ORTHO05D005954 8.1e-90 334.3 260 65.0
Nn5g30667 Nelumbo nucifera HOM05D004917 ORTHO05D005954 8.1e-90 334.3 266 66.5
TWI74G1062 Tripterygium wilfordii HOM05D004917 ORTHO05D005954 1.8e-89 333.2 255 65.9
Phvul.003G232900 Phaseolus vulgaris HOM05D004917 ORTHO05D005954 2.4e-89 332.8 247 67.6
COL.COLO4_11615 Corchorus olitorius HOM05D004917 ORTHO05D005954 4.0e-89 332.0 262 64.9
ECA232G4556 Erigeron canadensis HOM05D004917 ORTHO05D005954 9.0e-89 330.9 250 67.2
Rhsim08G0090300 Rhododendron simsii HOM05D004917 ORTHO05D005954 1.2e-88 330.5 244 68.0
SalBow5G1886 Salvia bowleyana HOM05D004917 ORTHO05D005954 1.2e-88 330.5 246 67.1
vmacro18012 Vaccinium macrocarpon HOM05D004917 ORTHO05D005954 2.6e-88 329.3 262 64.9
Sed0017274 Sechium edule HOM05D004917 ORTHO05D005954 5.8e-88 328.2 253 67.2
Thecc.01G076400 Theobroma cacao HOM05D004917 ORTHO05D005954 5.8e-88 328.2 260 64.2
CAN.G775.1 Capsicum annuum HOM05D004917 ORTHO05D005954 7.6e-88 327.8 201 75.6
HanXRQChr09g0262071 Helianthus annuus HOM05D004917 ORTHO05D005954 1.3e-87 327.0 257 65.8
arahy.Tifrunner.gnm1.ann1.UB5R5Q Arachis hypogaea HOM05D004917 ORTHO05D005954 1.7e-87 326.6 247 68.0
PSO170G3850 Papaver somniferum HOM05D004917 ORTHO05D005954 1.7e-87 326.6 270 67.0
PGR102G2131 Punica granatum HOM05D004917 ORTHO05D005954 2.9e-87 325.9 260 66.5
Carub.0008s2673 Capsella rubella HOM05D004917 ORTHO05D005954 3.8e-87 325.5 207 73.9
Os03g0729200 Oryza sativa ssp. japonica HOM05D004917 ORTHO05D005954 3.8e-87 325.5 251 64.5
Phvul.003G232800 Phaseolus vulgaris HOM05D004917 ORTHO05D005954 3.8e-87 325.5 238 68.5
Gorai.008G085700 Gossypium raimondii HOM05D004917 ORTHO05D005954 8.4e-87 324.3 194 75.8
Zm00001eb215580 Zea mays HOM05D004917 ORTHO05D005954 1.1e-86 323.9 227 70.0
Gohir.D12G076900 Gossypium hirsutum HOM05D004917 ORTHO05D005954 2.4e-86 322.8 194 75.3
AL8G43550 Arabidopsis lyrata HOM05D004917 ORTHO05D005954 4.2e-86 322.0 247 66.0
PSO170G3322 Papaver somniferum HOM05D004917 ORTHO05D005954 4.2e-86 322.0 199 76.4
VMungo0251G2665 Vigna mungo HOM05D004917 ORTHO05D005954 7.1e-86 321.2 240 67.5
Migut.L00432 Erythranthe guttata HOM05D004917 ORTHO05D005954 2.1e-85 319.7 254 64.2
CsaV3_2G016370 Cucumis sativus L. HOM05D004917 ORTHO05D005954 3.5e-85 318.9 248 65.3
Sp2g28930 Schrenkiella parvula HOM05D004917 ORTHO05D005954 3.5e-85 318.9 260 63.5
CARHR279840 Cardamine hirsuta HOM05D004917 ORTHO05D005954 4.6e-85 318.5 214 71.0
PSO017G2694 Papaver somniferum HOM05D004917 ORTHO05D005954 7.9e-85 317.8 198 76.8
EL10Ac6g15593 Beta vulgaris HOM05D004917 ORTHO05D005954 1.0e-84 317.4 266 61.3
RcHm_v2.0_Chr2g0108771 Rosa chinensis HOM05D004917 ORTHO05D005954 1.0e-84 317.4 202 78.2
DCAR_014953 Daucus carota HOM05D004917 ORTHO05D005954 1.8e-84 316.6 220 69.1
AT5G65840 Arabidopsis thaliana HOM05D004917 ORTHO05D005954 2.3e-84 316.2 260 65.0
Thhalv10004770m.g Eutrema salsugineum HOM05D004917 ORTHO05D005954 1.1e-83 313.9 262 60.7
BraA09t36573Z Brassica rapa HOM05D004917 ORTHO05D005954 1.9e-83 313.2 213 70.4
C09p10750 Brassica napus HOM05D004917 ORTHO05D005954 2.5e-83 312.8 204 71.6
SEGI_14750 Sequoiadendron giganteum HOM05D004917 ORTHO05D005954 5.6e-83 311.6 205 71.2
BcaB04g20033 Brassica carinata HOM05D004917 ORTHO05D005954 1.6e-82 310.1 214 68.7
BcaB04g20036 Brassica carinata HOM05D004917 ORTHO05D005954 1.6e-82 310.1 214 68.7
THA.LOC104827747 Tarenaya hassleriana HOM05D004917 ORTHO05D005954 2.1e-82 309.7 210 68.6
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 2.8e-82 309.3 211 69.7
BcaC04g23243 Brassica carinata HOM05D004917 ORTHO05D005954 6.2e-82 308.1 213 68.5
BolC9t53970H Brassica oleracea HOM05D004917 ORTHO05D005954 6.2e-82 308.1 213 69.0
Lalb_Chr11g0075991 Lupinus albus HOM05D004917 ORTHO05D005954 1.4e-81 307.0 208 73.1
A09p09210 Brassica napus HOM05D004917 ORTHO05D005954 2.4e-81 306.2 253 62.8
Ah.03g140710 Amaranthus hybridus HOM05D004917 ORTHO05D005954 4.0e-81 305.4 242 66.9
AUR62007540 Chenopodium quinoa HOM05D004917 ORTHO05D005954 4.0e-81 305.4 192 74.5
PSO170G4503 Papaver somniferum HOM05D004917 ORTHO05D005954 6.9e-81 304.7 200 75.0
PSO017G4293 Papaver somniferum HOM05D004917 ORTHO05D005954 1.5e-80 303.5 205 72.7
AUR62004032 Chenopodium quinoa HOM05D004917 ORTHO05D005954 2.6e-80 302.8 192 74.5
SGA_v2.0_scaffold79G25603 Striga asiatica HOM05D004917 ORTHO05D005954 2.2e-79 299.7 232 67.7
Lj4A165T49 Lonicera japonica HOM05D004917 ORTHO05D005954 3.8e-79 298.9 258 60.9
GSVIVG01007168001 Vitis vinifera HOM05D004917 ORTHO05D005954 3.8e-79 298.9 160 87.5
ATR0739G130 Amborella trichopoda HOM05D004917 ORTHO05D005954 1.4e-78 297.0 193 71.5
MELO3C020846.2 Cucumis melo HOM05D004917 ORTHO05D005954 3.5e-77 292.4 249 61.0
ClCG02G012210 Citrullus lanatus HOM05D004917 ORTHO05D005954 7.9e-77 291.2 254 61.8
CSS0005558 Camellia sinensis var. sinensis HOM05D004917 ORTHO05D005954 1.8e-76 290.0 248 61.7
Oeu013341.1 Olea europaea HOM05D004917 ORTHO05D005954 4.3e-75 285.4 157 84.7
DCAR_000455 Daucus carota HOM05D004917 ORTHO05D005954 7.4e-75 284.6 167 77.8
Nitab4.5_0000036g0150 Nicotiana tabacum HOM05D004917 ORTHO05D005954 9.7e-75 284.3 159 83.0
Haze_15025 Corylus avellana HOM05D004917 ORTHO05D005954 1.3e-74 283.9 256 59.4
Migut.L00430 Erythranthe guttata HOM05D004917 ORTHO05D005954 1.5e-72 276.9 203 66.0
CDE02G4371 Ceratophyllum demersum HOM05D004917 ORTHO05D005954 1.4e-70 270.4 204 62.7
Os03g0729300 Oryza sativa ssp. japonica HOM05D004917 ORTHO05D005954 9.3e-70 267.7 242 56.2
Dinv26959 Davidia involucrata HOM05D004917 ORTHO05D005954 1.3e-68 263.8 211 66.4
Peaxi162Scf00449g00417 Petunia axillaris HOM05D004917 ORTHO05D005954 6.7e-68 261.5 265 57.4
MBI16_g06077_MAGBIO Magnolia biondii HOM05D004917 ORTHO05D005954 8.5e-63 244.6 250 54.8
Nitab4.5_0007379g0030 Nicotiana tabacum HOM05D004917 ORTHO05D005954 3.2e-62 242.7 260 53.1
Hund16417 Selenicereus undatus HOM05D004917 ORTHO05D005954 1.1e-57 227.6 149 73.8
Pp3c27_7100 Physcomitrium patens HOM05D004917 ORTHO05D005954 2.4e-57 226.5 235 47.2
AagrBONN_evm.TU.Sc2ySwM_368.1530 Anthoceros agrestis HOM05D004917 ORTHO05D005954 2.7e-53 213.0 240 45.8
unitig_37.g11996 Utricularia gibba HOM05D004917 ORTHO05D005954 6.7e-52 208.4 203 56.2
Zm00001eb056030 Zea mays HOM05D004917 ORTHO05D005954 2.8e-50 203.0 129 70.5
FAN23G2689 Fragaria x ananassa HOM05D004917 ORTHO05D005954 9.1e-49 198.0 152 70.4
QL06p038908 Quercus lobata HOM05D004917 ORTHO05D005954 4.0e-44 182.6 102 82.4
GSVIVG01004400001 Vitis vinifera HOM05D004917 ORTHO05D005954 1.5e-43 180.6 103 79.6
GSVIVG01007167001 Vitis vinifera HOM05D004917 ORTHO05D005954 3.2e-38 162.9 155 60.0
ATR0739G160 Amborella trichopoda HOM05D004917 ORTHO05D005954 1.6e-37 160.6 108 66.7
FAN26G2723 Fragaria x ananassa HOM05D004917 ORTHO05D005954 8.8e-36 154.8 198 46.0
QL02p069743 Quercus lobata HOM05D004917 ORTHO05D005954 5.4e-33 145.6 99 68.7
QL06p038910 Quercus lobata HOM05D004917 ORTHO05D005954 1.6e-32 144.1 90 73.3
FAN28G0406 Fragaria x ananassa HOM05D004917 ORTHO05D005954 1.1e-30 137.9 101 68.3
Carub.0004s1915 Capsella rubella HOM05D007024 ORTHO05D008865 3.8e-23 112.8 209 33.0
MCO14G127 Micromonas commoda HOM05D004917 ORTHO05D005954 1.1e-22 111.3 160 38.8
Sabra07G0005500 Salix brachista HOM05D004917 ORTHO05D005954 8.0e-21 105.1 151 45.0
Lalb_Chr20g0112901 Lupinus albus HOM05D007024 ORTHO05D008865 1.4e-20 104.4 237 30.4
Potri.007G007201 Populus trichocarpa HOM05D004917 ORTHO05D005954 8.9e-20 101.7 69 75.4
SMO353G0397 Selaginella moellendorffii HOM05D007024 ORTHO05D008865 6.4e-18 95.5 172 33.7
Actinidia05279 Actinidia chinensis HOM05D007024 ORTHO05D008865 6.0e-16 89.0 173 34.1
Zm00001eb030360 Zea mays HOM05D004917 ORTHO05D005954 3.9e-15 86.3 89 56.2
PRCOL_00004664 Prasinoderma coloniale HOM05D004917 ORTHO05D005954 5.0e-15 85.9 132 37.1
arahy.Tifrunner.gnm1.ann1.F27BB1 Arachis hypogaea HOM05D004917 ORTHO05D005954 6.6e-15 85.5 53 77.4
CDE04G0730 Ceratophyllum demersum HOM05D007024 ORTHO05D008865 1.9e-14 84.0 208 30.3
AagrBONN_evm.TU.Sc2ySwM_344.3825 Anthoceros agrestis HOM05D007024 ORTHO05D008865 8.0e-13 78.6 136 32.4
CANSAT80G1842 Cannabis sativa HOM05D007024 ORTHO05D008865 3.1e-12 76.6 196 29.1
MCO06G061 Micromonas commoda HOM05D004917 ORTHO05D005954 1.5e-11 74.3 138 34.1
Gohir.A12G080465 Gossypium hirsutum HOM05D004917 ORTHO05D005954 1.3e-10 71.2 50 64.0
ATR0739G073 Amborella trichopoda HOM05D004917 ORTHO05D005954 2.9e-10 70.1 89 42.7
Cre17.g697050 Chlamydomonas reinhardtii HOM05D004917 ORTHO05D005954 1.1e-09 68.2 119 35.3
Ah.15g092040 Amaranthus hybridus HOM05D006367 ORTHO05D007942 2.4e-09 67.0 136 34.6
MCO07G374 Micromonas commoda HOM05D004917 ORTHO05D005954 1.2e-08 64.7 85 41.2
Haze_02356 Corylus avellana HOM05D004917 ORTHO05D005954 3.0e-07 60.1 37 75.7
PRCOL_00002665 Prasinoderma coloniale HOM05D006376 ORTHO05D008046 8.6e-07 58.5 110 31.8


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