Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G0724 Fragaria x ananassa HOM05D005814 ORTHO05D006821 1.8e-40 168.7 81 100.0
FAN12G4197 Fragaria x ananassa HOM05D005814 ORTHO05D006821 2.2e-25 118.6 76 77.6
FAN28G0559 Fragaria x ananassa HOM05D005814 ORTHO05D006821 3.2e-24 114.8 56 94.6
FAN07G0664 Fragaria x ananassa HOM05D005814 ORTHO05D006821 5.4e-24 114.0 76 76.3
FvH4_4g33270 Fragaria vesca HOM05D005814 ORTHO05D006821 1.9e-21 105.5 59 88.1
FAN12G4059 Fragaria x ananassa HOM05D005814 ORTHO05D006821 1.9e-21 105.5 59 88.1
FAN07G0145 Fragaria x ananassa HOM05D005814 ORTHO05D006821 2.5e-21 105.1 59 88.1
FAN17G1112 Fragaria x ananassa HOM05D005814 ORTHO05D006821 7.3e-21 103.6 59 86.4
FAN22G0411 Fragaria x ananassa HOM05D005814 ORTHO05D006821 7.3e-21 103.6 59 86.4
RcHm_v2.0_Chr4g0442421 Rosa chinensis HOM05D005814 ORTHO05D006821 2.8e-20 101.7 59 84.7
PSO782G2706 Papaver somniferum HOM05D005814 ORTHO05D006821 4.9e-17 90.9 89 56.2
Prupe.1G335600 Prunus persica HOM05D005814 ORTHO05D006821 3.2e-16 88.2 58 74.1
PSO782G1915 Papaver somniferum HOM05D005814 ORTHO05D006821 4.1e-16 87.8 89 55.1
Duzib251G0248 Durio zibethinus HOM05D005814 ORTHO05D006821 2.0e-15 85.5 57 75.4
Gohir.D12G157900 Gossypium hirsutum HOM05D005814 ORTHO05D006821 2.0e-15 85.5 57 75.4
Gorai.008G170700 Gossypium raimondii HOM05D005814 ORTHO05D006821 2.0e-15 85.5 57 75.4
Ciclev10017889m.g Citrus clementina HOM05D005814 ORTHO05D006821 3.5e-15 84.7 58 72.4
Gohir.A12G154700 Gossypium hirsutum HOM05D005814 ORTHO05D006821 4.6e-15 84.3 57 73.7
Cfa015048 Carpinus fangiana HOM05D005814 ORTHO05D006821 1.3e-14 82.8 57 75.4
CiPaw.06G055200 Carya illinoinensis HOM05D005814 ORTHO05D006821 1.3e-14 82.8 54 74.1
MD13G1018000 Malus domestica HOM05D005814 ORTHO05D006821 1.3e-14 82.8 58 70.7
Sc16g0008510 Simmondsia chinensis HOM05D005814 ORTHO05D006821 1.3e-14 82.8 58 69.0
TWI74G1321 Tripterygium wilfordii HOM05D005814 ORTHO05D006821 2.3e-14 82.0 58 72.4
TAR629G0065 Trochodendron aralioides HOM05D005814 ORTHO05D006821 3.0e-14 81.6 56 71.4
Cpa.g.sc2.165 Carica papaya HOM05D005814 ORTHO05D006821 3.9e-14 81.3 57 71.9
Migut.E00496 Erythranthe guttata HOM05D005814 ORTHO05D006821 6.6e-14 80.5 56 71.4
Lj6A734T81 Lonicera japonica HOM05D005814 ORTHO05D006821 1.1e-13 79.7 56 71.4
Dinv26373 Davidia involucrata HOM05D005814 ORTHO05D006821 1.9e-13 79.0 56 71.4
Hma1.2p1_0234F.1_g098410 Hydrangea macrophylla HOM05D005814 ORTHO05D006821 1.9e-13 79.0 56 66.1
Manes.17G085800 Manihot esculenta HOM05D005814 ORTHO05D006821 2.5e-13 78.6 57 68.4
Actinidia22431 Actinidia chinensis HOM05D005814 ORTHO05D006821 3.3e-13 78.2 55 72.7
unitig_27.g25164 Utricularia gibba HOM05D005814 ORTHO05D006821 3.3e-13 78.2 55 70.9
CSS0022543 Camellia sinensis var. sinensis HOM05D005814 ORTHO05D006821 4.3e-13 77.8 56 69.6
Potri.010G103800 Populus trichocarpa HOM05D005814 ORTHO05D006821 4.3e-13 77.8 58 67.2
QL03p038226 Quercus lobata HOM05D005814 ORTHO05D006821 4.3e-13 77.8 57 66.7
THA.LOC104805940 Tarenaya hassleriana HOM05D005814 ORTHO05D006821 4.3e-13 77.8 84 50.0
Oeu006299.1 Olea europaea HOM05D005814 ORTHO05D006821 5.6e-13 77.4 55 69.1
Lj2g0010004 Lotus japonicus HOM05D005814 ORTHO05D006821 7.3e-13 77.0 57 68.4
Nitab4.5_0003884g0090 Nicotiana tabacum HOM05D005814 ORTHO05D006821 7.3e-13 77.0 55 70.9
Aqoxy3G04061 Aquilegia oxysepala HOM05D005814 ORTHO05D006821 9.5e-13 76.6 57 66.7
A06p10800 Brassica napus HOM05D005814 ORTHO05D006821 9.5e-13 76.6 57 68.4
BraA06t24258Z Brassica rapa HOM05D005814 ORTHO05D006821 9.5e-13 76.6 57 68.4
Peaxi162Scf00337g00625 Petunia axillaris HOM05D005814 ORTHO05D006821 9.5e-13 76.6 55 70.9
Hma1.2p1_1786F.1_g302390 Hydrangea macrophylla HOM05D005814 ORTHO05D006821 1.2e-12 76.3 55 63.6
Hma1.2p1_1845F.1_g305150 Hydrangea macrophylla HOM05D005814 ORTHO05D006821 1.2e-12 76.3 55 63.6
SalBow2G2494 Salvia bowleyana HOM05D005814 ORTHO05D006821 1.2e-12 76.3 56 66.1
DCAR_023563 Daucus carota HOM05D005814 ORTHO05D006821 2.1e-12 75.5 55 70.9
GSVIVG01011625001 Vitis vinifera HOM05D005814 ORTHO05D006821 2.1e-12 75.5 58 63.8
Sp1g13190 Schrenkiella parvula HOM05D005814 ORTHO05D006821 2.8e-12 75.1 57 63.2
BcaB02g06546 Brassica carinata HOM05D005814 ORTHO05D006821 3.6e-12 74.7 57 66.7
A08p31820 Brassica napus HOM05D005814 ORTHO05D006821 3.6e-12 74.7 57 64.9
BraA08t35104Z Brassica rapa HOM05D005814 ORTHO05D006821 3.6e-12 74.7 57 64.9
ECA234G1246 Erigeron canadensis HOM05D005814 ORTHO05D006821 3.6e-12 74.7 55 69.1
Phvul.003G016100 Phaseolus vulgaris HOM05D005814 ORTHO05D006821 6.2e-12 73.9 56 67.9
Cc11_g06580 Coffea canephora HOM05D005814 ORTHO05D006821 1.1e-11 73.2 55 67.3
Haze_10846 Corylus avellana HOM05D005814 ORTHO05D006821 1.1e-11 73.2 57 71.9
Lsat_1_v5_gn_4_23401 Lactuca sativa HOM05D005814 ORTHO05D006821 1.4e-11 72.8 55 63.6
Psat6g051160 Pisum sativum HOM05D005814 ORTHO05D006821 1.4e-11 72.8 59 62.7
Sed0028047 Sechium edule HOM05D005814 ORTHO05D006821 1.8e-11 72.4 57 64.9
AL1G26770 Arabidopsis lyrata HOM05D005814 ORTHO05D006821 2.3e-11 72.0 57 64.9
AT1G14750 Arabidopsis thaliana HOM05D005814 ORTHO05D006821 2.3e-11 72.0 57 64.9
Carub.0001s1454 Capsella rubella HOM05D005814 ORTHO05D006821 2.3e-11 72.0 57 64.9
Solyc04g008070.3 Solanum lycopersicum HOM05D005814 ORTHO05D006821 2.3e-11 72.0 55 69.1
Sopen04g003220 Solanum pennellii HOM05D005814 ORTHO05D006821 2.3e-11 72.0 55 69.1
PGSC0003DMG400029513 Solanum tuberosum HOM05D005814 ORTHO05D006821 2.3e-11 72.0 55 69.1
C05p12700 Brassica napus HOM05D005814 ORTHO05D006821 3.1e-11 71.6 57 64.9
BolC5t30013H Brassica oleracea HOM05D005814 ORTHO05D006821 3.1e-11 71.6 57 64.9
Ca_13001_v3 Cicer arietinum L. HOM05D005814 ORTHO05D006821 3.1e-11 71.6 57 63.2
Ca_13003_v3 Cicer arietinum L. HOM05D005814 ORTHO05D006821 3.1e-11 71.6 57 63.2
Thhalv10009486m.g Eutrema salsugineum HOM05D005814 ORTHO05D006821 3.1e-11 71.6 57 64.9
Atru.chr11.819 Acer truncatum HOM05D005814 ORTHO05D006821 4.0e-11 71.2 49 73.5
Os03g0225200 Oryza sativa ssp. japonica HOM05D005814 ORTHO05D006821 4.0e-11 71.2 57 63.2
SHI04346 Sapria himalayana HOM05D005814 ORTHO05D006821 4.0e-11 71.2 77 49.4
Sed0025695 Sechium edule HOM05D005814 ORTHO05D006821 4.0e-11 71.2 57 63.2
Eucgr.B02694 Eucalyptus grandis HOM05D005814 ORTHO05D006821 5.2e-11 70.9 57 64.9
BcaC07g38760 Brassica carinata HOM05D005814 ORTHO05D006821 6.8e-11 70.5 57 63.2
C08p16910 Brassica napus HOM05D005814 ORTHO05D006821 6.8e-11 70.5 57 63.2
BolC8t49318H Brassica oleracea HOM05D005814 ORTHO05D006821 6.8e-11 70.5 57 63.2
BraA09t41550Z Brassica rapa HOM05D005814 ORTHO05D006821 6.8e-11 70.5 57 63.2
CAN.G74.21 Capsicum annuum HOM05D005814 ORTHO05D006821 6.8e-11 70.5 55 67.3
BcaC07g41541 Brassica carinata HOM05D005814 ORTHO05D006821 8.9e-11 70.1 57 63.2
A09p61820 Brassica napus HOM05D005814 ORTHO05D006821 8.9e-11 70.1 57 63.2
Glyma.07G172600 Glycine max HOM05D005814 ORTHO05D006821 8.9e-11 70.1 57 63.2
C08p45460 Brassica napus HOM05D005814 ORTHO05D006821 1.2e-10 69.7 57 61.4
BolC8t52099H Brassica oleracea HOM05D005814 ORTHO05D006821 1.2e-10 69.7 57 61.4
ClCG07G005440 Citrullus lanatus HOM05D005814 ORTHO05D006821 1.2e-10 69.7 57 63.2
Aa31LG1G340 Aethionema arabicum HOM05D005814 ORTHO05D006821 1.5e-10 69.3 57 63.2
Aa31LG2G8110 Aethionema arabicum HOM05D005814 ORTHO05D006821 2.6e-10 68.6 56 60.7
BcaB03g13082 Brassica carinata HOM05D005814 ORTHO05D006821 2.6e-10 68.6 57 63.2
ATR0021G040 Amborella trichopoda HOM05D005814 ORTHO05D006821 3.4e-10 68.2 58 55.2
HPP92_002293 Vanilla planifolia HOM05D005814 ORTHO05D006821 3.4e-10 68.2 58 53.4
Lalb_Chr10g0095581 Lupinus albus HOM05D005814 ORTHO05D006821 4.4e-10 67.8 56 62.5
VMungo1215G3061 Vigna mungo HOM05D005814 ORTHO05D006821 4.4e-10 67.8 56 66.1
Ah.04g160370 Amaranthus hybridus HOM05D005814 ORTHO05D006821 5.8e-10 67.4 58 58.6
Medtr1g032850 Medicago truncatula HOM05D005814 ORTHO05D006821 5.8e-10 67.4 59 61.0
CARHR015280 Cardamine hirsuta HOM05D005814 ORTHO05D006821 9.9e-10 66.6 57 61.4
HanXRQChr17g0566001 Helianthus annuus HOM05D005814 ORTHO05D006821 9.9e-10 66.6 68 58.8
PGR004G2344 Punica granatum HOM05D005814 ORTHO05D006821 1.7e-09 65.9 58 53.4
TPR.G6435 Trifolium pratense HOM05D005814 ORTHO05D006821 1.7e-09 65.9 58 60.3
CsaV3_5G014510 Cucumis sativus L. HOM05D005814 ORTHO05D006821 3.7e-09 64.7 57 56.1
Zm00001eb399650 Zea mays HOM05D005814 ORTHO05D006821 6.4e-09 63.9 69 52.2
EL10Ac4g09401 Beta vulgaris HOM05D005814 ORTHO05D006821 1.1e-08 63.2 58 58.6
Dinv26379 Davidia involucrata HOM05D005814 ORTHO05D006821 2.4e-08 62.0 47 68.1
Thecc.02G307500 Theobroma cacao HOM05D005814 ORTHO05D006821 2.7e-07 58.5 31 83.9


User provided reference genes

Program Settings