Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G0704 Fragaria x ananassa HOM05D014719 ORTHO05D003355 1.4e-216 756.1 422 100.0
FAN28G3008 Fragaria x ananassa HOM05D014719 ORTHO05D003355 3.5e-167 592.0 419 84.5
FvH4_1g28370 Fragaria vesca HOM05D014719 ORTHO05D003355 9.6e-157 557.4 364 91.5
FAN23G2175 Fragaria x ananassa HOM05D014719 ORTHO05D003355 3.8e-153 545.4 415 79.8
FAN19G1520 Fragaria x ananassa HOM05D014719 ORTHO05D003355 2.8e-140 502.7 364 85.4
RcHm_v2.0_Chr3g0496661 Rosa chinensis HOM05D014719 ORTHO05D003355 1.5e-109 400.6 378 62.2
Prupe.8G267500 Prunus persica HOM05D014719 ORTHO05D003355 6.2e-47 192.6 378 41.5
Hma1.2p1_2829F.1_g329210 Hydrangea macrophylla HOM05D005863 ORTHO05D003355 6.9e-22 109.4 374 30.5
QL08p003943 Quercus lobata HOM05D014719 ORTHO05D003355 1.5e-21 108.2 382 30.6
CiPaw.12G138700 Carya illinoinensis HOM05D014719 ORTHO05D003355 4.5e-21 106.7 385 30.6
GSVIVG01014696001 Vitis vinifera HOM05D005863 ORTHO05D003355 8.4e-20 102.4 383 30.0
TAR629G0397 Trochodendron aralioides HOM05D005863 ORTHO05D003355 2.1e-18 97.8 391 28.6
Rhsim04G0012300 Rhododendron simsii HOM05D005863 ORTHO05D003355 7.9e-18 95.9 378 29.6
Actinidia37152 Actinidia chinensis HOM05D005863 ORTHO05D003355 1.6e-15 88.2 379 29.0
vmacro09646 Vaccinium macrocarpon HOM05D005863 ORTHO05D003355 6.9e-14 82.8 378 25.1
Eucgr.F03684 Eucalyptus grandis HOM05D005863 ORTHO05D003355 2.0e-13 81.3 378 24.9
Nn1g07525 Nelumbo nucifera HOM05D005863 ORTHO05D003355 9.4e-11 72.4 376 23.7
CSS0034444 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D001683 1.0e-09 68.9 107 37.4
Rhsim10G0199200 Rhododendron simsii HOM05D005863 ORTHO05D003355 1.5e-08 65.1 108 33.3
Haze_09834 Corylus avellana HOM05D014719 ORTHO05D003355 2.0e-08 64.7 158 33.5
Sp1g41465 Schrenkiella parvula HOM05D012516 ORTHO05D003355 3.3e-08 63.9 95 34.7
PSO384G3490 Papaver somniferum HOM05D005863 ORTHO05D003355 4.3e-08 63.5 71 43.7
PSO339G2613 Papaver somniferum HOM05D005863 ORTHO05D003355 5.7e-08 63.2 66 47.0
arahy.Tifrunner.gnm1.ann1.9BU9L2 Arachis hypogaea HOM05D005863 ORTHO05D003355 7.4e-08 62.8 95 37.9
Rhsim10G0199400 Rhododendron simsii HOM05D005863 ORTHO05D003355 7.4e-08 62.8 100 35.0
arahy.Tifrunner.gnm1.ann1.11ED70 Arachis hypogaea HOM05D005863 ORTHO05D003355 1.3e-07 62.0 95 37.9
Potri.007G102500 Populus trichocarpa HOM05D005863 ORTHO05D003355 1.3e-07 62.0 102 37.3
Lj6g0020676 Lotus japonicus HOM05D005863 ORTHO05D003355 2.2e-07 61.2 62 48.4
CANSAT78G1634 Cannabis sativa HOM05D005863 ORTHO05D003355 3.7e-07 60.5 63 46.0
VMungo1309G2065 Vigna mungo HOM05D001598 ORTHO05D002757 4.8e-07 60.1 69 44.9
Ciclev10008896m.g Citrus clementina HOM05D005863 ORTHO05D003355 6.3e-07 59.7 90 36.7
COL.COLO4_23547 Corchorus olitorius HOM05D005863 ORTHO05D003355 8.2e-07 59.3 75 37.3
Lsat_1_v5_gn_7_114301 Lactuca sativa HOM05D005863 ORTHO05D003355 8.2e-07 59.3 83 36.1
AL1G63990 Arabidopsis lyrata HOM05D012516 ORTHO05D003355 2.4e-06 57.8 95 36.8
TPR.G14234 Trifolium pratense HOM05D013281 ORTHO05D003355 3.1e-06 57.4 74 37.8
Thhalv10011171m.g Eutrema salsugineum HOM05D000747 ORTHO05D001683 4.1e-06 57.0 58 43.1
PSO339G3984 Papaver somniferum HOM05D005863 ORTHO05D003355 5.3e-06 56.6 100 33.0
PGR031G0790 Punica granatum HOM05D005863 ORTHO05D003355 5.3e-06 56.6 95 40.0
BraA05t20625Z Brassica rapa HOM05D012516 ORTHO05D003355 6.9e-06 56.2 93 33.3
Dinv14763 Davidia involucrata HOM05D005863 ORTHO05D003355 6.9e-06 56.2 102 30.4
ATR0751G078 Amborella trichopoda HOM05D005863 ORTHO05D003355 9.1e-06 55.8 110 37.3
AT1G55865 Arabidopsis thaliana HOM05D012516 ORTHO05D003355 9.1e-06 55.8 95 33.7


User provided reference genes

Program Settings