Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G0615 Fragaria x ananassa HOM05D004935 ORTHO05D005676 2.6e-122 442.2 240 100.0
FAN28G0886 Fragaria x ananassa HOM05D004935 ORTHO05D005676 1.1e-104 383.6 240 89.6
FvH4_1g28640 Fragaria vesca HOM05D004935 ORTHO05D005676 3.7e-97 358.6 240 87.1
RcHm_v2.0_Chr3g0492651 Rosa chinensis HOM05D004935 ORTHO05D005676 1.4e-83 313.5 238 78.2
Prupe.3G163400 Prunus persica HOM05D004935 ORTHO05D005676 7.6e-66 254.6 238 65.5
MD09G1265200 Malus domestica HOM05D004935 ORTHO05D005676 3.8e-65 252.3 238 64.3
Thecc.04G001700 Theobroma cacao HOM05D004935 ORTHO05D005676 1.0e-62 244.2 239 61.9
MD17G1261400 Malus domestica HOM05D004935 ORTHO05D005676 2.1e-60 236.5 237 61.2
CANSAT78G0803 Cannabis sativa HOM05D004935 ORTHO05D005676 1.8e-59 233.4 240 59.2
QL02p059972 Quercus lobata HOM05D004935 ORTHO05D005676 3.1e-59 232.6 215 63.3
CiPaw.04G048500 Carya illinoinensis HOM05D004935 ORTHO05D005676 8.9e-59 231.1 238 59.2
CiPaw.03G075500 Carya illinoinensis HOM05D004935 ORTHO05D005676 1.2e-58 230.7 241 59.3
SGA_v2.0_scaffold45G17134 Striga asiatica HOM05D004935 ORTHO05D005676 9.9e-58 227.6 250 55.6
Hma1.2p1_0034F.1_g021280 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 4.9e-57 225.3 221 60.6
Rhsim10G0182800 Rhododendron simsii HOM05D004935 ORTHO05D005676 4.9e-57 225.3 239 59.0
CSS0027542 Camellia sinensis var. sinensis HOM05D004935 ORTHO05D005676 8.4e-57 224.6 238 58.4
Manes.02G079800 Manihot esculenta HOM05D004935 ORTHO05D005676 1.9e-56 223.4 239 57.7
Duzib133G0236 Durio zibethinus HOM05D004935 ORTHO05D005676 2.4e-56 223.0 239 58.6
COL.COLO4_19777 Corchorus olitorius HOM05D004935 ORTHO05D005676 7.1e-56 221.5 223 61.9
vmacro20490 Vaccinium macrocarpon HOM05D004935 ORTHO05D005676 9.3e-56 221.1 229 60.3
ClCG01G008740 Citrullus lanatus HOM05D004935 ORTHO05D005676 1.6e-55 220.3 233 57.1
Ciclev10029179m.g Citrus clementina HOM05D004935 ORTHO05D005676 6.0e-55 218.4 218 59.6
Manes.01G121800 Manihot esculenta HOM05D004935 ORTHO05D005676 6.0e-55 218.4 227 59.9
Duzib138G1863 Durio zibethinus HOM05D004935 ORTHO05D005676 1.7e-54 216.9 212 61.8
Aqoxy3G04045 Aquilegia oxysepala HOM05D004935 ORTHO05D005676 2.3e-54 216.5 214 58.4
Migut.K01110 Erythranthe guttata HOM05D004935 ORTHO05D005676 2.3e-54 216.5 215 59.5
Hma1.2p1_0158F.1_g069850 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 3.0e-54 216.1 234 59.0
Dinv28224 Davidia involucrata HOM05D004935 ORTHO05D005676 3.9e-54 215.7 238 56.3
Nitab4.5_0002465g0010 Nicotiana tabacum HOM05D004935 ORTHO05D005676 3.9e-54 215.7 227 57.7
CsaV3_5G024270 Cucumis sativus L. HOM05D004935 ORTHO05D005676 6.6e-54 214.9 232 56.0
Lj4A255T23 Lonicera japonica HOM05D004935 ORTHO05D005676 6.6e-54 214.9 230 56.5
Actinidia01601 Actinidia chinensis HOM05D004935 ORTHO05D005676 8.7e-54 214.5 244 57.0
Gohir.A07G073800 Gossypium hirsutum HOM05D004935 ORTHO05D005676 1.1e-53 214.2 239 54.0
Potri.004G082300 Populus trichocarpa HOM05D004935 ORTHO05D005676 1.1e-53 214.2 206 63.1
TWI53G1040 Tripterygium wilfordii HOM05D004935 ORTHO05D005676 1.9e-53 213.4 224 60.7
Eucgr.J01625 Eucalyptus grandis HOM05D004935 ORTHO05D005676 2.5e-53 213.0 222 55.9
Actinidia17180 Actinidia chinensis HOM05D004935 ORTHO05D005676 7.3e-53 211.5 238 55.5
arahy.Tifrunner.gnm1.ann1.5XP26J Arachis hypogaea HOM05D004935 ORTHO05D005676 7.3e-53 211.5 212 59.4
Dinv19063 Davidia involucrata HOM05D004935 ORTHO05D005676 1.3e-52 210.7 197 65.0
Nitab4.5_0001088g0190 Nicotiana tabacum HOM05D004935 ORTHO05D005676 1.6e-52 210.3 227 57.7
Peaxi162Scf00078g00178 Petunia axillaris HOM05D004935 ORTHO05D005676 6.2e-52 208.4 207 59.9
MELO3C025122.2 Cucumis melo HOM05D004935 ORTHO05D005676 8.1e-52 208.0 231 55.8
Lj6g0018793 Lotus japonicus HOM05D004935 ORTHO05D005676 8.1e-52 208.0 213 60.6
Lj2A514G44 Lonicera japonica HOM05D004935 ORTHO05D005676 1.4e-51 207.2 249 51.0
Medtr5g091900 Medicago truncatula HOM05D004935 ORTHO05D005676 6.9e-51 204.9 207 58.9
TPR.G12527 Trifolium pratense HOM05D004935 ORTHO05D005676 6.9e-51 204.9 207 58.9
Nn4g24526 Nelumbo nucifera HOM05D004935 ORTHO05D005676 1.5e-50 203.8 219 56.6
Cfa007772 Carpinus fangiana HOM05D004935 ORTHO05D005676 2.0e-50 203.4 313 46.6
Gorai.001G082900 Gossypium raimondii HOM05D004935 ORTHO05D005676 2.0e-50 203.4 239 51.9
Oeu032311.1 Olea europaea HOM05D004935 ORTHO05D005676 2.0e-50 203.4 221 57.0
PGSC0003DMG400013258 Solanum tuberosum HOM05D004935 ORTHO05D005676 2.0e-50 203.4 210 59.5
Gohir.D07G078500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 4.5e-50 202.2 239 51.9
MSTRG.3688 Avicennia marina HOM05D004935 ORTHO05D005676 5.8e-50 201.8 233 53.2
Actinidia28792 Actinidia chinensis HOM05D004935 ORTHO05D005676 9.9e-50 201.1 236 52.5
MBI13_g35399_MAGBIO Magnolia biondii HOM05D004935 ORTHO05D005676 9.9e-50 201.1 217 55.3
Sabra04G0054800 Salix brachista HOM05D004935 ORTHO05D005676 9.9e-50 201.1 219 54.8
Glyma.18G042900 Glycine max HOM05D004935 ORTHO05D005676 3.8e-49 199.1 208 58.7
Glyma.11G213800 Glycine max HOM05D004935 ORTHO05D005676 6.4e-49 198.4 238 54.2
Oeu029081.1 Olea europaea HOM05D004935 ORTHO05D005676 6.4e-49 198.4 213 55.4
Atru.chr1.1949 Acer truncatum HOM05D004935 ORTHO05D005676 1.1e-48 197.6 182 62.6
Gohir.A11G169300 Gossypium hirsutum HOM05D004935 ORTHO05D005676 1.1e-48 197.6 228 51.8
Ca_06292_v3 Cicer arietinum L. HOM05D004935 ORTHO05D005676 4.2e-48 195.7 242 54.5
PSO170G5471 Papaver somniferum HOM05D004935 ORTHO05D005676 4.2e-48 195.7 228 51.8
THA.LOC104820912 Tarenaya hassleriana HOM05D004935 ORTHO05D005676 4.2e-48 195.7 209 57.9
TAR622G0462 Trochodendron aralioides HOM05D004935 ORTHO05D005676 4.2e-48 195.7 216 54.2
Gorai.007G188100 Gossypium raimondii HOM05D004935 ORTHO05D005676 5.4e-48 195.3 228 50.4
Sopen11g006600 Solanum pennellii HOM05D004935 ORTHO05D005676 5.4e-48 195.3 203 59.1
Gohir.D11G175500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 1.2e-47 194.1 228 50.4
SalBow3G4475 Salvia bowleyana HOM05D004935 ORTHO05D005676 1.2e-47 194.1 195 57.9
arahy.Tifrunner.gnm1.ann1.8KIW52 Arachis hypogaea HOM05D004935 ORTHO05D005676 2.7e-47 193.0 223 53.8
Phvul.001G228000 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 2.7e-47 193.0 218 53.7
Solyc11g011760.3 Solanum lycopersicum HOM05D004935 ORTHO05D005676 3.5e-47 192.6 217 57.1
Lalb_Chr10g0104161 Lupinus albus HOM05D004935 ORTHO05D005676 7.9e-47 191.4 227 55.5
PSO407G0171 Papaver somniferum HOM05D004935 ORTHO05D005676 7.9e-47 191.4 220 53.2
unitig_748.g8451 Utricularia gibba HOM05D004935 ORTHO05D005676 7.9e-47 191.4 234 51.7
Lalb_Chr18g0053611 Lupinus albus HOM05D004935 ORTHO05D005676 1.0e-46 191.0 236 51.7
VMungo1383G0526 Vigna mungo HOM05D004935 ORTHO05D005676 3.0e-46 189.5 212 54.7
Hund13074 Selenicereus undatus HOM05D004935 ORTHO05D005676 8.7e-46 188.0 234 50.9
PGR042G3611 Punica granatum HOM05D004935 ORTHO05D005676 7.4e-45 184.9 230 53.9
AT5G16550 Arabidopsis thaliana HOM05D004935 ORTHO05D005676 2.1e-44 183.3 214 53.3
BcaC03g18499 Brassica carinata HOM05D004935 ORTHO05D005676 3.7e-44 182.6 215 52.6
AL6G27510 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 6.2e-44 181.8 216 51.4
Psat2g014520 Pisum sativum HOM05D004935 ORTHO05D005676 6.2e-44 181.8 228 54.4
arahy.Tifrunner.gnm1.ann1.63R0A2 Arachis hypogaea HOM05D004935 ORTHO05D005676 9.0e-43 177.9 222 51.8
Zm00001eb179280 Zea mays HOM05D004935 ORTHO05D005676 9.0e-43 177.9 204 50.5
Carub.0006s1475 Capsella rubella HOM05D004935 ORTHO05D005676 1.2e-42 177.6 219 50.2
BolC3t13402H Brassica oleracea HOM05D004935 ORTHO05D005676 2.6e-42 176.4 216 50.0
BcaB08g36840 Brassica carinata HOM05D004935 ORTHO05D005676 4.5e-42 175.6 229 51.5
BcaB01g04976 Brassica carinata HOM05D004935 ORTHO05D005676 9.9e-42 174.5 208 51.4
HPP92_017642 Vanilla planifolia HOM05D004935 ORTHO05D005676 9.9e-42 174.5 221 49.8
CDE11G1189 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 1.7e-41 173.7 223 47.5
BcaC04g18869 Brassica carinata HOM05D004935 ORTHO05D005676 2.2e-41 173.3 191 56.0
C09p60610 Brassica napus HOM05D004935 ORTHO05D005676 2.2e-41 173.3 191 55.5
BolC9t58894H Brassica oleracea HOM05D004935 ORTHO05D005676 2.2e-41 173.3 191 55.5
Lalb_Chr17g0345951 Lupinus albus HOM05D004935 ORTHO05D005676 2.2e-41 173.3 203 53.2
A10p22660 Brassica napus HOM05D004935 ORTHO05D005676 2.9e-41 172.9 208 54.8
BraA10t44327Z Brassica rapa HOM05D004935 ORTHO05D005676 2.9e-41 172.9 208 54.8
FAN19G0113 Fragaria x ananassa HOM05D004935 ORTHO05D005676 6.4e-41 171.8 92 94.6
Zm00001eb041900 Zea mays HOM05D004935 ORTHO05D005676 1.9e-40 170.2 204 48.5
A02p03620 Brassica napus HOM05D004935 ORTHO05D005676 3.2e-40 169.5 218 50.5
Psat2g044600 Pisum sativum HOM05D004935 ORTHO05D005676 5.5e-40 168.7 223 51.6
Sc11g0004790 Simmondsia chinensis HOM05D004935 ORTHO05D005676 5.5e-40 168.7 212 51.4
C03p09070 Brassica napus HOM05D004935 ORTHO05D005676 7.1e-40 168.3 218 49.1
TPR.G9990 Trifolium pratense HOM05D004935 ORTHO05D005676 7.1e-40 168.3 223 49.8
BraA02t05331Z Brassica rapa HOM05D004935 ORTHO05D005676 2.7e-39 166.4 218 50.9
Cc07_g13020 Coffea canephora HOM05D004935 ORTHO05D005676 2.7e-39 166.4 244 46.7
LjContig00141g0002036 Lotus japonicus HOM05D004935 ORTHO05D005676 2.7e-39 166.4 223 50.2
Lsat_1_v5_gn_8_111520 Lactuca sativa HOM05D004935 ORTHO05D005676 7.9e-39 164.9 198 54.5
CDE05G2820 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 1.3e-38 164.1 222 48.2
Medtr5g077280 Medicago truncatula HOM05D004935 ORTHO05D005676 2.3e-38 163.3 224 52.7
arahy.Tifrunner.gnm1.ann1.PKWW5Q Arachis hypogaea HOM05D004935 ORTHO05D005676 3.9e-38 162.5 166 60.8
TAR629G3076 Trochodendron aralioides HOM05D004935 ORTHO05D005676 3.9e-38 162.5 225 47.1
Glyma.02G242200 Glycine max HOM05D004935 ORTHO05D005676 1.1e-35 154.5 173 55.5
Phvul.008G238800 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 1.8e-35 153.7 163 58.9
BcaC03g18497 Brassica carinata HOM05D004935 ORTHO05D005676 4.0e-35 152.5 214 48.1
C02p08410 Brassica napus HOM05D004935 ORTHO05D005676 4.0e-35 152.5 214 48.1
BolC2t06759H Brassica oleracea HOM05D004935 ORTHO05D005676 4.0e-35 152.5 214 48.1
Aa31LG11G13100 Aethionema arabicum HOM05D004935 ORTHO05D005676 6.9e-35 151.8 220 46.8
Haze_14300 Corylus avellana HOM05D004935 ORTHO05D005676 1.7e-33 147.1 252 43.3
VMungo0647G1435 Vigna mungo HOM05D004935 ORTHO05D005676 3.8e-33 146.0 163 56.4
Sp6g27610 Schrenkiella parvula HOM05D004935 ORTHO05D005676 4.9e-33 145.6 218 45.9
GSVIVG01026318001 Vitis vinifera HOM05D004935 ORTHO05D005676 1.6e-31 140.6 118 75.4
Sed0000771 Sechium edule HOM05D004935 ORTHO05D005676 2.3e-30 136.7 232 40.5
Oeu014715.1 Olea europaea HOM05D004935 ORTHO05D005676 5.1e-30 135.6 121 64.5
EL10Ac2g03209 Beta vulgaris HOM05D004935 ORTHO05D005676 1.1e-29 134.4 166 53.0
Thhalv10014473m.g Eutrema salsugineum HOM05D004935 ORTHO05D005676 4.3e-29 132.5 218 43.6
Sc11g0004530 Simmondsia chinensis HOM05D004935 ORTHO05D005676 3.1e-27 126.3 212 43.4
BraA03t10111Z Brassica rapa HOM05D000423 ORTHO05D005676 1.2e-26 124.4 210 42.9
A03p07850 Brassica napus HOM05D004935 ORTHO05D005676 1.5e-26 124.0 213 41.8
HanXRQChr15g0489811 Helianthus annuus HOM05D004935 ORTHO05D005676 5.9e-26 122.1 201 43.3
ECA246G1322 Erigeron canadensis HOM05D004935 ORTHO05D005676 2.5e-24 116.7 155 50.3
Peaxi162Scf00085g00527 Petunia axillaris HOM05D004935 ORTHO05D005676 1.8e-22 110.5 89 70.8
DCAR_003418 Daucus carota HOM05D004935 ORTHO05D005676 7.4e-21 105.1 114 57.9
AL3G36180 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 4.8e-20 102.4 136 47.8
AL92U10070 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 6.3e-20 102.1 146 47.3
AL6G14310 Arabidopsis lyrata HOM05D000097 ORTHO05D005676 1.0e-17 94.7 146 45.2
CARHR196680 Cardamine hirsuta HOM05D004935 ORTHO05D005676 9.4e-16 88.2 83 67.5
AagrBONN_evm.TU.Sc2ySwM_117.2252 Anthoceros agrestis HOM05D004935 ORTHO05D005676 4.7e-15 85.9 167 34.7
CARHR196690 Cardamine hirsuta HOM05D004935 ORTHO05D005676 6.7e-14 82.0 92 45.7
Mapoly0035s0070 Marchantia polymorpha HOM05D004935 ORTHO05D005676 8.8e-14 81.6 164 33.5
Zm00001eb099130 Zea mays HOM05D004935 ORTHO05D005676 1.5e-13 80.9 128 43.0
Medtr5g077270 Medicago truncatula HOM05D007893 ORTHO05D010042 2.6e-13 80.1 81 61.7
Cpa.g.sc178.1 Carica papaya HOM05D004935 ORTHO05D005676 3.3e-13 79.7 93 47.3
MSTRG.15645 Avicennia marina HOM05D004935 ORTHO05D005676 1.1e-11 74.7 87 46.0
Pp3c25_6290 Physcomitrium patens HOM05D004935 ORTHO05D005676 5.3e-11 72.4 167 34.1
SEGI_39153 Sequoiadendron giganteum HOM05D004935 ORTHO05D005676 9.1e-11 71.6 109 45.9
DCAR_003417 Daucus carota HOM05D004935 ORTHO05D005676 1.5e-10 70.9 71 52.1
Pp3c6_9570 Physcomitrium patens HOM05D004935 ORTHO05D005676 8.5e-09 65.1 180 27.2
EL10Ac2g03210 Beta vulgaris HOM05D004935 ORTHO05D005676 4.7e-07 59.3 53 54.7


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