Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G0569 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.5e-211 739.2 356 100.0
FAN19G0280 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.0e-132 475.3 428 61.9
FvH4_5g31171 Fragaria vesca HOM05D003981 ORTHO05D003666 4.4e-102 375.6 456 52.4
FvH4_1g20161 Fragaria vesca HOM05D003981 ORTHO05D003666 1.8e-92 343.6 364 55.8
FAN18G3444 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.3e-73 279.3 358 50.0
FAN19G1135 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.1e-68 262.7 160 80.0
FAN19G2888 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.1e-47 193.4 101 95.0
RcHm_v2.0_Chr3g0449831 Rosa chinensis HOM05D003981 ORTHO05D003666 9.9e-30 135.2 412 31.1
FvH4_3g19662 Fragaria vesca HOM05D003981 ORTHO05D003666 6.4e-29 132.5 150 52.7
Prupe.7G182200 Prunus persica HOM05D003981 ORTHO05D003666 1.8e-23 114.4 405 31.1
FAN11G1242 Fragaria x ananassa HOM05D003981 ORTHO05D003666 6.0e-19 99.4 357 28.9
RcHm_v2.0_Chr4g0428611 Rosa chinensis HOM05D003981 ORTHO05D003666 1.8e-18 97.8 153 40.5
FAN18G2397 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.9e-18 96.7 407 27.8
Prupe.7G195100 Prunus persica HOM05D003981 ORTHO05D003666 5.1e-18 96.3 155 41.3
RcHm_v2.0_Chr3g0480281 Rosa chinensis HOM05D003981 ORTHO05D003666 5.6e-17 92.8 153 39.2
RcHm_v2.0_Chr5g0016491 Rosa chinensis HOM05D003981 ORTHO05D003666 1.8e-15 87.8 214 34.1
FAN04G2111 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.4e-15 87.4 424 27.8
FAN06G2056 Fragaria x ananassa HOM05D001225 ORTHO05D001252 2.4e-15 87.4 417 25.9
FAN13G2481 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.4e-15 87.4 398 27.4
MD04G1179800 Malus domestica HOM05D003981 ORTHO05D003666 3.1e-15 87.0 418 26.6
FvH4_1g00570 Fragaria vesca HOM05D003981 ORTHO05D003666 1.3e-13 81.6 352 25.3
FAN08G0171 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.7e-13 81.3 434 26.3
FAN09G1004 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.9e-13 79.7 141 38.3
FvH4_3g40671 Fragaria vesca HOM05D003981 ORTHO05D003666 8.4e-13 79.0 150 36.7
FAN16G2079 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.4e-12 78.2 150 36.7
FAN07G1958 Fragaria x ananassa HOM05D003981 ORTHO05D003666 7.1e-12 75.9 178 33.1
FvH4_4g22410 Fragaria vesca HOM05D003981 ORTHO05D003666 9.3e-12 75.5 154 33.8
FvH4_4g34580 Fragaria vesca HOM05D003981 ORTHO05D003666 9.3e-12 75.5 410 24.4
FAN25G0801 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.2e-11 75.1 119 41.2
FAN28G1753 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.6e-11 74.7 152 32.2
MD12G1195000 Malus domestica HOM05D003981 ORTHO05D003666 2.7e-11 73.9 150 35.3
FvH4_5g38320 Fragaria vesca HOM05D003981 ORTHO05D003666 3.5e-11 73.6 158 36.1
FAN03G0829 Fragaria x ananassa HOM05D001225 ORTHO05D001252 6.0e-11 72.8 143 37.8
FAN12G2446 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.0e-10 72.0 183 35.0
RcHm_v2.0_Chr2g0164001 Rosa chinensis HOM05D003981 ORTHO05D003666 1.0e-10 72.0 393 26.2
FAN12G3036 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.3e-10 70.9 190 33.2
FvH4_1g00691 Fragaria vesca HOM05D003981 ORTHO05D003666 3.0e-10 70.5 151 31.8
FvH4_5g07350 Fragaria vesca HOM05D003981 ORTHO05D003666 3.0e-10 70.5 160 36.9
FvH4_5g07470 Fragaria vesca HOM05D003981 ORTHO05D003666 3.0e-10 70.5 160 36.9
FvH4_6g09550 Fragaria vesca HOM05D003981 ORTHO05D003666 3.0e-10 70.5 327 26.9
FAN07G0986 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.0e-10 70.5 172 33.1
FvH4_4g34520 Fragaria vesca HOM05D003981 ORTHO05D003666 5.1e-10 69.7 172 33.7
FvH4_5g07510 Fragaria vesca HOM05D003981 ORTHO05D003666 6.7e-10 69.3 160 36.9
FAN17G1570 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.7e-10 68.9 175 32.0
Prupe.2G095600 Prunus persica HOM05D003981 ORTHO05D003666 1.1e-09 68.6 163 32.5
Prupe.2G209200 Prunus persica HOM05D003981 ORTHO05D003666 2.5e-09 67.4 161 34.2
FvH4_1g25190 Fragaria vesca HOM05D003981 ORTHO05D003666 3.3e-09 67.0 165 31.5
FvH4_2g20921 Fragaria vesca HOM05D003981 ORTHO05D003666 3.3e-09 67.0 159 35.2
FAN13G0559 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.3e-09 67.0 138 35.5
FAN17G3075 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.3e-09 67.0 148 35.1
FAN19G2785 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.3e-09 66.6 165 32.7
RcHm_v2.0_Chr6g0253541 Rosa chinensis HOM05D003981 ORTHO05D003666 4.3e-09 66.6 157 34.4
Prupe.2G095900 Prunus persica HOM05D003981 ORTHO05D003666 5.7e-09 66.2 136 34.6
Prupe.7G195400 Prunus persica HOM05D003981 ORTHO05D003666 9.6e-09 65.5 124 39.5
RcHm_v2.0_Chr3g0460411 Rosa chinensis HOM05D003981 ORTHO05D003666 1.3e-08 65.1 149 34.9
FAN15G1118 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.6e-08 64.7 154 32.5
FAN18G1682 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.6e-08 64.7 149 34.2
FvH4_6g09801 Fragaria vesca HOM05D003981 ORTHO05D003666 2.1e-08 64.3 158 30.4
FAN08G1984 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.7e-08 63.5 138 34.8
FAN14G1975 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.7e-08 63.5 158 30.4
Prupe.2G095700 Prunus persica HOM05D003981 ORTHO05D003666 6.3e-08 62.8 148 32.4
FvH4_3g01041 Fragaria vesca HOM05D003981 ORTHO05D003666 1.1e-07 62.0 257 25.3
FvH4_5g08848 Fragaria vesca HOM05D003981 ORTHO05D003666 1.1e-07 62.0 148 33.8
FAN14G2468 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.4e-07 61.6 147 33.3
FAN24G2659 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.8e-07 61.2 402 25.1
FAN26G0221 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.4e-07 60.8 255 24.7
Prupe.2G095800 Prunus persica HOM05D003981 ORTHO05D003666 2.4e-07 60.8 168 29.2
FvH4_1g00700 Fragaria vesca HOM05D003981 ORTHO05D003666 3.1e-07 60.5 148 35.8
FAN28G2016 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.3e-07 59.7 151 34.4
Cfa004503 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.2e-06 58.5 178 30.9
Prupe.2G096000 Prunus persica HOM05D003981 ORTHO05D003666 1.5e-06 58.2 183 29.0
FvH4_1g00812 Fragaria vesca HOM05D003981 ORTHO05D003666 2.6e-06 57.4 151 33.8
FvH4_6g09911 Fragaria vesca HOM05D003981 ORTHO05D003666 2.6e-06 57.4 149 32.2
MD12G1195500 Malus domestica HOM05D003981 ORTHO05D003666 2.6e-06 57.4 148 36.5
MD11G1006900 Malus domestica HOM05D003981 ORTHO05D003666 3.4e-06 57.0 154 33.8
CiPaw.03G025900 Carya illinoinensis HOM05D000007 ORTHO05D000039 4.5e-06 56.6 162 32.1
MD12G1195600 Malus domestica HOM05D003981 ORTHO05D003666 4.5e-06 56.6 148 34.5
AT1G53370 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.0e-05 55.5 203 27.6
FAN08G0732 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.0e-05 55.5 143 30.1


User provided reference genes

Program Settings