Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G0421 Fragaria x ananassa HOM05D007828 ORTHO05D009889 3.3e-129 465.3 284 100.0
FAN19G0878 Fragaria x ananassa HOM05D007828 ORTHO05D009889 1.0e-114 417.2 284 91.5
FvH4_1g04931 Fragaria vesca HOM05D007828 ORTHO05D009889 2.3e-114 416.0 286 91.6
RcHm_v2.0_Chr2g0090531 Rosa chinensis HOM05D007828 ORTHO05D009889 3.4e-97 359.0 292 79.1
Prupe.7G230300 Prunus persica HOM05D007828 ORTHO05D009889 1.1e-68 264.2 313 58.5
MD02G1047900 Malus domestica HOM05D007828 ORTHO05D009889 7.9e-54 214.9 315 51.7
CiPaw.04G164600 Carya illinoinensis HOM05D007828 ORTHO05D009889 2.5e-52 209.9 298 51.3
Ciclev10010509m.g Citrus clementina HOM05D007828 ORTHO05D009889 2.5e-52 209.9 306 50.7
Cfa003261 Carpinus fangiana HOM05D007828 ORTHO05D009889 2.1e-51 206.8 286 52.1
Haze_25710 Corylus avellana HOM05D007828 ORTHO05D009889 4.8e-51 205.7 286 54.9
Thecc.09G111200 Theobroma cacao HOM05D007828 ORTHO05D009889 2.4e-47 193.4 314 48.1
CsaV3_1G030510 Cucumis sativus L. HOM05D007828 ORTHO05D009889 9.3e-47 191.4 314 47.1
Manes.03G019900 Manihot esculenta HOM05D007828 ORTHO05D009889 1.6e-46 190.7 291 49.8
Cpa.g.sc810.5 Carica papaya HOM05D007828 ORTHO05D009889 3.0e-45 186.4 306 45.4
Gohir.A06G062100 Gossypium hirsutum HOM05D007828 ORTHO05D009889 1.1e-44 184.5 296 48.6
Gorai.010G070300 Gossypium raimondii HOM05D007828 ORTHO05D009889 6.2e-43 178.7 296 48.0
Phvul.002G313500 Phaseolus vulgaris HOM05D007828 ORTHO05D009889 2.4e-42 176.8 299 46.5
Gohir.D06G060400 Gossypium hirsutum HOM05D007828 ORTHO05D009889 3.1e-42 176.4 296 45.9
Duzib187G0623 Durio zibethinus HOM05D007828 ORTHO05D009889 1.2e-41 174.5 296 46.6
Atru.chr7.1344 Acer truncatum HOM05D007828 ORTHO05D009889 1.5e-41 174.1 305 48.2
Potri.018G079400 Populus trichocarpa HOM05D007828 ORTHO05D009889 4.5e-41 172.6 307 47.9
TWI63G1614 Tripterygium wilfordii HOM05D007828 ORTHO05D009889 1.3e-40 171.0 300 46.3
Manes.16G116600 Manihot esculenta HOM05D007828 ORTHO05D009889 1.4e-39 167.5 298 45.0
TAR636G3628 Trochodendron aralioides HOM05D007828 ORTHO05D009889 1.9e-39 167.2 291 46.7
Sed0012449 Sechium edule HOM05D007828 ORTHO05D009889 2.5e-39 166.8 301 44.5
PGR142G3024 Punica granatum HOM05D007828 ORTHO05D009889 3.2e-39 166.4 288 44.1
TAR624G0153 Trochodendron aralioides HOM05D007828 ORTHO05D009889 3.2e-39 166.4 267 46.8
VMungo0251G2715 Vigna mungo HOM05D007828 ORTHO05D009889 3.2e-39 166.4 301 49.2
MELO3C025334.2 Cucumis melo HOM05D007828 ORTHO05D009889 5.5e-39 165.6 284 45.1
Phvul.004G163000 Phaseolus vulgaris HOM05D007828 ORTHO05D009889 1.6e-38 164.1 299 52.8
QL02p085484 Quercus lobata HOM05D007828 ORTHO05D009889 1.6e-38 164.1 290 50.3
Actinidia20352 Actinidia chinensis HOM05D007828 ORTHO05D009889 2.1e-38 163.7 287 44.9
Glyma.09G190200 Glycine max HOM05D007828 ORTHO05D009889 3.5e-38 162.9 309 50.5
Sed0011451 Sechium edule HOM05D007828 ORTHO05D009889 4.6e-38 162.5 318 42.8
Glyma.08G038800 Glycine max HOM05D007828 ORTHO05D009889 2.3e-37 160.2 288 46.9
Lj4g0015011 Lotus japonicus HOM05D007828 ORTHO05D009889 2.3e-37 160.2 302 43.4
Cc06_g09610 Coffea canephora HOM05D007828 ORTHO05D009889 5.1e-37 159.1 294 42.5
Glyma.05G231300 Glycine max HOM05D007828 ORTHO05D009889 1.1e-36 157.9 294 44.6
Dinv41596 Davidia involucrata HOM05D007828 ORTHO05D009889 1.8e-34 150.6 279 48.4
COL.COLO4_34914 Corchorus olitorius HOM05D007828 ORTHO05D009889 5.3e-34 149.1 310 46.8
Lalb_Chr14g0371491 Lupinus albus HOM05D007828 ORTHO05D009889 1.0e-32 144.8 313 47.6
Actinidia09414 Actinidia chinensis HOM05D007828 ORTHO05D009889 2.9e-32 143.3 262 47.3
Duzib168G1738 Durio zibethinus HOM05D007828 ORTHO05D009889 1.1e-31 141.4 220 45.9
Medtr6g086505 Medicago truncatula HOM05D007828 ORTHO05D009889 1.4e-31 141.0 294 43.2
Lj2g0009665 Lotus japonicus HOM05D007828 ORTHO05D009889 3.2e-31 139.8 303 44.9
VMungo0464G0263 Vigna mungo HOM05D007828 ORTHO05D009889 7.9e-30 135.2 293 48.5
Ah.14g081900 Amaranthus hybridus HOM05D007828 ORTHO05D009889 1.0e-29 134.8 286 42.3
PSO063G6099 Papaver somniferum HOM05D007828 ORTHO05D009889 3.0e-29 133.3 332 38.6
Psat1g042080 Pisum sativum HOM05D007828 ORTHO05D009889 1.3e-27 127.9 268 44.8
EL10Ac8g18503 Beta vulgaris HOM05D007828 ORTHO05D009889 2.8e-27 126.7 316 40.5
Rhsim03G0242900 Rhododendron simsii HOM05D007828 ORTHO05D009889 3.1e-26 123.2 288 41.7
THA.LOC104811107 Tarenaya hassleriana HOM05D007828 ORTHO05D009889 1.5e-25 120.9 284 38.7
Oeu013432.1 Olea europaea HOM05D007828 ORTHO05D009889 2.9e-24 116.7 281 37.7
PSO782G3184 Papaver somniferum HOM05D007828 ORTHO05D009889 1.1e-23 114.8 291 39.5
AUR62021512 Chenopodium quinoa HOM05D007828 ORTHO05D009889 1.2e-22 111.3 266 38.0
Lsat_1_v5_gn_7_40641 Lactuca sativa HOM05D007828 ORTHO05D009889 1.2e-22 111.3 285 38.6
Lsat_1_v5_gn_5_103381 Lactuca sativa HOM05D007828 ORTHO05D009889 1.6e-22 110.9 282 40.8
DCAR_028715 Daucus carota HOM05D007828 ORTHO05D009889 2.1e-22 110.5 290 41.4
Dinv36622 Davidia involucrata HOM05D007828 ORTHO05D009889 2.0e-20 104.0 261 45.6
AT3G29300 Arabidopsis thaliana HOM05D007828 ORTHO05D009889 4.1e-18 96.3 286 34.3
Sp2g17900 Schrenkiella parvula HOM05D007828 ORTHO05D009889 5.3e-18 95.9 281 37.4
Ah.09g227940 Amaranthus hybridus HOM05D007828 ORTHO05D009889 1.5e-17 94.4 247 36.4
A06p39980 Brassica napus HOM05D007828 ORTHO05D009889 2.0e-17 94.0 289 35.6
BraA06t26913Z Brassica rapa HOM05D007828 ORTHO05D009889 2.0e-17 94.0 289 35.6
CARHR154000 Cardamine hirsuta HOM05D007828 ORTHO05D009889 2.9e-16 90.1 290 38.3
ECA240G1757 Erigeron canadensis HOM05D007828 ORTHO05D009889 8.5e-16 88.6 206 37.9
BcaC06g33685 Brassica carinata HOM05D007828 ORTHO05D009889 2.5e-15 87.0 282 35.8
Lj7C649T8 Lonicera japonica HOM05D007828 ORTHO05D009889 5.5e-15 85.9 172 42.4
C07p38190 Brassica napus HOM05D007828 ORTHO05D009889 9.4e-15 85.1 290 34.8
BolC7t44341H Brassica oleracea HOM05D007828 ORTHO05D009889 9.4e-15 85.1 290 34.8
Thhalv10004856m.g Eutrema salsugineum HOM05D007828 ORTHO05D009889 3.6e-14 83.2 298 38.3
MBI15_g13431_MAGBIO Magnolia biondii HOM05D007828 ORTHO05D009889 3.6e-14 83.2 219 37.9
Lalb_Chr22g0352821 Lupinus albus HOM05D007828 ORTHO05D009889 6.1e-14 82.4 286 35.0
TPR.G35269 Trifolium pratense HOM05D007828 ORTHO05D009889 6.7e-13 79.0 206 36.4
Glyma.07G086700 Glycine max HOM05D007828 ORTHO05D009889 8.8e-13 78.6 194 48.5
PGSC0003DMG400000314 Solanum tuberosum HOM05D007828 ORTHO05D009889 2.0e-12 77.4 124 47.6
Sc18g0001180 Simmondsia chinensis HOM05D007828 ORTHO05D009889 1.7e-11 74.3 266 33.5
AL5G19330 Arabidopsis lyrata HOM05D007828 ORTHO05D009889 8.2e-11 72.0 287 33.8
Gorai.001G005100 Gossypium raimondii HOM05D007828 ORTHO05D009889 2.4e-10 70.5 189 37.6
Carub.0005s0801 Capsella rubella HOM05D007828 ORTHO05D009889 7.0e-10 68.9 285 34.0
HanXRQChr03g0061871 Helianthus annuus HOM05D007828 ORTHO05D009889 1.2e-09 68.2 201 31.3
Gohir.A07G006450 Gossypium hirsutum HOM05D007828 ORTHO05D009889 2.0e-09 67.4 189 37.0
Nn8g39203 Nelumbo nucifera HOM05D007828 ORTHO05D009889 3.8e-08 63.2 150 39.3


User provided reference genes

Program Settings