Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G0240 Fragaria x ananassa HOM05D005548 ORTHO05D007497 0.0e+00 2118.6 1372 100.0
FAN23G0305 Fragaria x ananassa HOM05D005548 ORTHO05D007497 0.0e+00 1824.7 1504 84.0
FAN19G0378 Fragaria x ananassa HOM05D005548 ORTHO05D025485 1.5e-275 953.7 924 81.8
FvH4_1g04720 Fragaria vesca HOM05D005548 ORTHO05D025485 1.0e-271 941.0 1002 79.7
FAN28G0185 Fragaria x ananassa HOM05D005548 ORTHO05D025485 9.1e-257 891.3 1238 65.3
FvH4_1g04721 Fragaria vesca HOM05D005548 ORTHO05D007497 2.4e-249 866.7 464 95.9
FAN19G0123 Fragaria x ananassa HOM05D005548 ORTHO05D007497 7.0e-249 865.1 464 95.7
RcHm_v2.0_Chr2g0090331 Rosa chinensis HOM05D005548 ORTHO05D007497 2.9e-231 806.6 464 89.9
FAN28G1005 Fragaria x ananassa HOM05D005548 ORTHO05D007497 3.3e-214 750.0 386 99.0
Prupe.7G231800 Prunus persica HOM05D005548 ORTHO05D007497 2.0e-203 714.1 469 79.7
MD02G1046200 Malus domestica HOM05D005548 ORTHO05D007497 1.1e-198 698.4 466 78.1
MD15G1184300 Malus domestica HOM05D005548 ORTHO05D007497 7.1e-193 679.1 465 77.2
Haze_25723 Corylus avellana HOM05D005548 ORTHO05D007497 5.5e-185 652.9 467 73.4
Haze_25730 Corylus avellana HOM05D005548 ORTHO05D007497 7.1e-185 652.5 467 73.4
Cfa021563 Carpinus fangiana HOM05D005548 ORTHO05D007497 2.3e-183 647.5 466 73.4
Eucgr.C01037 Eucalyptus grandis HOM05D005548 ORTHO05D007497 3.8e-178 630.2 457 72.0
Cpa.g.sc23.102 Carica papaya HOM05D005548 ORTHO05D007497 4.9e-178 629.8 468 71.8
Thecc.09G109700 Theobroma cacao HOM05D005548 ORTHO05D007497 8.4e-178 629.0 468 71.4
Duzib168G0181 Durio zibethinus HOM05D005548 ORTHO05D007497 2.7e-176 624.0 464 70.7
QL02p085206 Quercus lobata HOM05D005548 ORTHO05D007497 2.7e-176 624.0 470 72.3
GSVIVG01015386001 Vitis vinifera HOM05D005548 ORTHO05D007497 2.3e-175 620.9 430 74.4
arahy.Tifrunner.gnm1.ann1.HQIA7A Arachis hypogaea HOM05D005548 ORTHO05D007497 3.0e-175 620.5 476 67.2
CiPaw.04G163600 Carya illinoinensis HOM05D005548 ORTHO05D007497 5.1e-175 619.8 469 69.5
Dinv41607 Davidia involucrata HOM05D005548 ORTHO05D007497 4.3e-174 616.7 468 71.2
TAR383G0243 Trochodendron aralioides HOM05D005548 ORTHO05D007497 4.3e-174 616.7 465 69.9
Dinv36636 Davidia involucrata HOM05D005548 ORTHO05D007497 5.7e-174 616.3 458 70.5
VMungo0464G1126 Vigna mungo HOM05D005548 ORTHO05D007497 9.6e-174 615.5 462 69.5
Nn2g11732 Nelumbo nucifera HOM05D005548 ORTHO05D007497 2.8e-173 614.0 469 68.9
Glyma.07G085900 Glycine max HOM05D005548 ORTHO05D007497 4.8e-173 613.2 470 68.9
Glyma.09G191000 Glycine max HOM05D005548 ORTHO05D007497 8.2e-173 612.5 470 68.9
Manes.03G021300 Manihot esculenta HOM05D005548 ORTHO05D007497 8.2e-173 612.5 473 68.3
TWI63G0439 Tripterygium wilfordii HOM05D005548 ORTHO05D007497 8.2e-173 612.5 470 70.6
Lj2g0015861 Lotus japonicus HOM05D005548 ORTHO05D007497 1.4e-172 611.7 419 73.0
Lalb_Chr14g0371531 Lupinus albus HOM05D005548 ORTHO05D007497 5.3e-172 609.8 454 69.6
Potri.018G080900 Populus trichocarpa HOM05D005548 ORTHO05D007497 2.0e-171 607.8 466 68.2
Hma1.2p1_0518F.1_g171060 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 2.6e-171 607.4 405 74.3
Lalb_Chr22g0352791 Lupinus albus HOM05D005548 ORTHO05D007497 7.6e-171 605.9 476 66.6
Actinidia09420 Actinidia chinensis HOM05D005548 ORTHO05D007497 2.9e-170 604.0 397 76.3
Atru.chr7.1357 Acer truncatum HOM05D005548 ORTHO05D007497 6.5e-170 602.8 381 78.2
Phvul.004G163700 Phaseolus vulgaris HOM05D005548 ORTHO05D007497 6.5e-170 602.8 462 67.5
PGR142G0895 Punica granatum HOM05D005548 ORTHO05D007497 1.1e-169 602.1 401 75.8
Gohir.D07G005900 Gossypium hirsutum HOM05D005548 ORTHO05D007497 7.2e-169 599.4 469 68.2
PGSC0003DMG400000312 Solanum tuberosum HOM05D005548 ORTHO05D007497 7.2e-169 599.4 460 68.3
EL10Ac8g18489 Beta vulgaris HOM05D005548 ORTHO05D007497 9.3e-169 599.0 455 69.0
CSS0001162 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.6e-168 598.2 454 70.0
CSS0009071 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.6e-168 598.2 457 70.0
Nitab4.5_0005947g0010 Nicotiana tabacum HOM05D005548 ORTHO05D007497 3.5e-168 597.0 462 69.5
Sopen12g003070 Solanum pennellii HOM05D005548 ORTHO05D007497 4.6e-168 596.7 463 67.6
Solyc12g007090.2 Solanum lycopersicum HOM05D005548 ORTHO05D007497 1.0e-167 595.5 463 67.6
Gohir.A07G006100 Gossypium hirsutum HOM05D005548 ORTHO05D007497 1.8e-167 594.7 466 68.2
ClCG00G004520 Citrullus lanatus HOM05D005548 ORTHO05D007497 6.7e-167 592.8 466 67.8
Gorai.001G005500 Gossypium raimondii HOM05D005548 ORTHO05D007497 6.7e-167 592.8 469 67.6
MBI04_g22012_MAGBIO Magnolia biondii HOM05D005548 ORTHO05D007497 6.7e-167 592.8 460 68.3
COL.COLO4_34874 Corchorus olitorius HOM05D005548 ORTHO05D007497 1.1e-166 592.0 376 78.7
MELO3C025346.2 Cucumis melo HOM05D005548 ORTHO05D007497 2.5e-166 590.9 399 74.2
CAN.G1529.9 Capsicum annuum HOM05D005548 ORTHO05D007497 3.3e-166 590.5 451 68.1
DCAR_010452 Daucus carota HOM05D005548 ORTHO05D007497 7.4e-166 589.3 466 68.2
Hund26198 Selenicereus undatus HOM05D005548 ORTHO05D007497 3.7e-165 587.0 462 68.2
THA.LOC104811114 Tarenaya hassleriana HOM05D005548 ORTHO05D007497 1.4e-164 585.1 443 69.1
Sabra18G0068100 Salix brachista HOM05D005548 ORTHO05D007497 1.8e-164 584.7 460 68.0
Sc18g0001240 Simmondsia chinensis HOM05D005548 ORTHO05D007497 5.3e-164 583.2 464 66.6
Cc06_g09710 Coffea canephora HOM05D005548 ORTHO05D007497 4.5e-163 580.1 470 66.2
CsaV3_1G024240 Cucumis sativus L. HOM05D005548 ORTHO05D007497 4.5e-163 580.1 494 64.2
Sed0013441 Sechium edule HOM05D005548 ORTHO05D007497 7.7e-163 579.3 455 67.3
TPR.G18453 Trifolium pratense HOM05D005548 ORTHO05D007497 3.8e-162 577.0 465 66.2
Migut.K00455 Erythranthe guttata HOM05D005548 ORTHO05D007497 5.0e-162 576.6 438 69.2
Actinidia20374 Actinidia chinensis HOM05D005548 ORTHO05D007497 6.5e-162 576.2 376 76.6
AUR62010987 Chenopodium quinoa HOM05D005548 ORTHO05D007497 8.5e-162 575.9 375 74.9
Ca_03976_v3 Cicer arietinum L. HOM05D005548 ORTHO05D007497 4.2e-161 573.5 471 64.1
HanXRQChr06g0179971 Helianthus annuus HOM05D005548 ORTHO05D007497 9.4e-161 572.4 442 67.9
Lsat_1_v5_gn_8_95001 Lactuca sativa HOM05D005548 ORTHO05D007497 3.6e-160 570.5 461 65.5
PSO782G1908 Papaver somniferum HOM05D005548 ORTHO05D007497 3.6e-160 570.5 465 64.1
PSO832G1226 Papaver somniferum HOM05D005548 ORTHO05D007497 2.3e-159 567.8 469 63.1
Aqoxy7G01651 Aquilegia oxysepala HOM05D005548 ORTHO05D007497 3.0e-159 567.4 461 65.5
Medtr6g088460 Medicago truncatula HOM05D005548 ORTHO05D007497 6.7e-159 566.2 457 64.8
Psat1g042920 Pisum sativum HOM05D005548 ORTHO05D007497 3.3e-158 563.9 465 64.1
Peaxi162Scf00546g00024 Petunia axillaris HOM05D005548 ORTHO05D007497 2.4e-156 557.8 463 64.1
Lj7C651T8 Lonicera japonica HOM05D005548 ORTHO05D007497 3.1e-156 557.4 474 65.2
ECA233G4048 Erigeron canadensis HOM05D005548 ORTHO05D007497 6.9e-156 556.2 381 73.0
ATR0315G003 Amborella trichopoda HOM05D005548 ORTHO05D007497 2.0e-155 554.7 394 70.3
CDE02G3701 Ceratophyllum demersum HOM05D005548 ORTHO05D007497 2.6e-155 554.3 468 62.6
SalBow1G6148 Salvia bowleyana HOM05D005548 ORTHO05D007497 7.7e-155 552.7 434 66.1
AT5G19540 Arabidopsis thaliana HOM05D005548 ORTHO05D007497 1.0e-154 552.4 457 64.8
AL6G31050 Arabidopsis lyrata HOM05D005548 ORTHO05D007497 1.3e-154 552.0 428 67.5
CARHR193360 Cardamine hirsuta HOM05D005548 ORTHO05D007497 1.7e-154 551.6 451 65.9
Nitab4.5_0002904g0080 Nicotiana tabacum HOM05D005548 ORTHO05D007497 2.2e-154 551.2 462 65.4
Carub.0006s1789 Capsella rubella HOM05D005548 ORTHO05D007497 5.5e-153 546.6 462 64.3
Sp6g24840 Schrenkiella parvula HOM05D005548 ORTHO05D007497 9.4e-153 545.8 417 67.4
MSTRG.26421 Avicennia marina HOM05D005548 ORTHO05D007497 2.1e-152 544.7 440 64.5
Aa31LG4G18070 Aethionema arabicum HOM05D005548 ORTHO05D007497 4.7e-152 543.5 415 68.2
BcaB05g23389 Brassica carinata HOM05D005548 ORTHO05D007497 2.6e-150 537.7 412 66.5
Thhalv10013469m.g Eutrema salsugineum HOM05D005548 ORTHO05D007497 7.4e-150 536.2 416 66.3
unitig_899.g15439 Utricularia gibba HOM05D005548 ORTHO05D007497 7.4e-150 536.2 395 68.9
Duzib150G0071 Durio zibethinus HOM05D005548 ORTHO05D007497 3.7e-149 533.9 452 65.3
BolC2t06964H Brassica oleracea HOM05D005548 ORTHO05D007497 3.5e-147 527.3 416 65.4
A02p05630 Brassica napus HOM05D005548 ORTHO05D007497 4.5e-147 526.9 429 63.6
BraA02t05515Z Brassica rapa HOM05D005548 ORTHO05D007497 4.5e-147 526.9 429 63.6
SGA_v2.0_scaffold307G48040 Striga asiatica HOM05D005548 ORTHO05D007497 3.8e-146 523.9 422 63.3
BcaC03g13685 Brassica carinata HOM05D005548 ORTHO05D007497 6.5e-146 523.1 416 64.7
BNapus_Darmor_BZH_scaffold_38p02320 Brassica napus HOM05D005548 ORTHO05D007497 6.5e-146 523.1 416 64.7
vmacro20704 Vaccinium macrocarpon HOM05D005548 ORTHO05D007497 4.5e-139 500.4 462 58.0
Os08g0387500 Oryza sativa ssp. japonica HOM05D005548 ORTHO05D007497 1.1e-137 495.7 445 59.6
Zm00001eb042080 Zea mays HOM05D005548 ORTHO05D007497 9.4e-137 492.7 446 59.2
Rhsim01G0095300 Rhododendron simsii HOM05D005548 ORTHO05D007497 4.0e-135 487.3 464 55.8
Hma1.2p1_0518F.1_g171070 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 2.7e-131 474.6 316 74.1
SalBow1G2309 Salvia bowleyana HOM05D005548 ORTHO05D007497 4.7e-128 463.8 346 67.9
HPP92_019989 Vanilla planifolia HOM05D005548 ORTHO05D004628 3.7e-109 401.0 355 60.8
AUR62021496 Chenopodium quinoa HOM05D005548 ORTHO05D007497 9.5e-105 386.3 272 71.7
Mapoly0115s0052 Marchantia polymorpha HOM05D005548 ORTHO05D007497 7.5e-102 376.7 423 49.6
AagrBONN_evm.TU.Sc2ySwM_344.3922 Anthoceros agrestis HOM05D005548 ORTHO05D007497 2.4e-100 371.7 410 47.1
Pp3c17_15530 Physcomitrium patens HOM05D005548 ORTHO05D007497 2.4e-100 371.7 381 52.0
Pp3c17_15540 Physcomitrium patens HOM05D005548 ORTHO05D007497 1.9e-97 362.1 364 52.5
SMO367G0640 Selaginella moellendorffii HOM05D005548 ORTHO05D007497 1.5e-94 352.4 397 49.4
SEGI_13755 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 8.6e-90 336.7 375 48.8
SEGI_11261 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 7.9e-75 287.0 319 49.5
Rhsim01G0096400 Rhododendron simsii HOM05D005548 ORTHO05D007497 8.7e-74 283.5 337 45.7
CBR_g3024 Chara braunii HOM05D005548 ORTHO05D007497 1.6e-72 279.3 382 45.0
RcHm_v2.0_Chr2g0090321 Rosa chinensis HOM05D005548 ORTHO05D025485 2.7e-59 235.3 899 40.5
AUR62021498 Chenopodium quinoa HOM05D005548 ORTHO05D007497 2.6e-54 218.8 136 74.3
Ciclev10010350m.g Citrus clementina HOM05D005548 ORTHO05D007497 2.5e-49 202.2 252 46.8
Nn8g39172 Nelumbo nucifera HOM05D005548 ORTHO05D007497 3.2e-36 158.7 112 72.3
Oeu048670.1 Olea europaea HOM05D005548 ORTHO05D007497 3.9e-34 151.8 98 69.4
CSS0016063 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 2.1e-27 129.4 81 79.0
SEGI_23308 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 2.1e-27 129.4 350 30.6
arahy.Tifrunner.gnm1.ann1.VN1956 Arachis hypogaea HOM05D005548 ORTHO05D007497 6.1e-27 127.9 143 52.4
CSS0042262 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 1.0e-26 127.1 81 77.8
Ah.12g056490 Amaranthus hybridus HOM05D005548 ORTHO05D007497 1.8e-26 126.3 81 74.1
SEGI_35049 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 1.7e-24 119.8 256 31.6
Dinv06981 Davidia involucrata HOM05D005548 ORTHO05D045157 2.2e-24 119.4 84 70.2
CSS0021555 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 4.5e-22 111.7 74 77.0
CSS0011769 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 4.2e-20 105.1 130 52.3
MCO02G293 Micromonas commoda HOM05D005548 ORTHO05D007497 2.1e-19 102.8 383 27.9
CSS0008802 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 9.1e-15 87.4 121 47.9
CSS0008633 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 2.8e-11 75.9 74 58.1
SalBow1G1492 Salvia bowleyana HOM05D005548 ORTHO05D007497 2.8e-11 75.9 126 42.1
Lsat_1_v5_gn_5_96001 Lactuca sativa HOM05D005548 ORTHO05D029961 6.3e-08 64.7 72 48.6
TPR.G36012 Trifolium pratense HOM05D005548 ORTHO05D007497 2.0e-06 59.7 120 40.8


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