Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G0193 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.8e-59 232.3 108 100.0
FvH4_1g07240 Fragaria vesca HOM05D005692 ORTHO05D006953 2.3e-54 215.3 99 100.0
RcHm_v2.0_Chr2g0093151 Rosa chinensis HOM05D005692 ORTHO05D006953 5.6e-53 210.7 99 97.0
FAN19G2784 Fragaria x ananassa HOM05D005692 ORTHO05D006953 3.7e-52 208.0 99 96.0
FvH4_1g24820 Fragaria vesca HOM05D005692 ORTHO05D006953 2.0e-50 202.2 99 93.9
FAN23G0510 Fragaria x ananassa HOM05D005692 ORTHO05D006953 9.3e-48 193.4 90 97.8
FAN26G1568 Fragaria x ananassa HOM05D005692 ORTHO05D006953 9.3e-48 193.4 90 97.8
MD02G1077000 Malus domestica HOM05D005692 ORTHO05D006953 7.9e-47 190.3 95 88.4
FAN19G0937 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.8e-46 189.1 86 100.0
Prupe.7G211400 Prunus persica HOM05D005692 ORTHO05D006953 3.0e-46 188.3 95 87.4
MD15G1205700 Malus domestica HOM05D005692 ORTHO05D006953 8.7e-46 186.8 95 87.4
Ah.09g223860 Amaranthus hybridus HOM05D005692 ORTHO05D006953 8.2e-44 180.3 93 84.9
CANSAT78G0210 Cannabis sativa HOM05D005692 ORTHO05D006953 1.4e-43 179.5 96 81.2
COL.COLO4_18212 Corchorus olitorius HOM05D005692 ORTHO05D006953 1.4e-43 179.5 98 82.7
ClCG03G015670 Citrullus lanatus HOM05D005692 ORTHO05D006953 1.8e-43 179.1 94 85.1
Gorai.005G027900 Gossypium raimondii HOM05D005692 ORTHO05D006953 2.4e-43 178.7 95 83.2
AUR62039390 Chenopodium quinoa HOM05D005692 ORTHO05D006953 3.1e-43 178.3 93 83.9
Potri.012G001800 Populus trichocarpa HOM05D005692 ORTHO05D006953 3.1e-43 178.3 92 84.8
Sabra12G0019500 Salix brachista HOM05D005692 ORTHO05D006953 3.1e-43 178.3 92 84.8
Sabra12G0019700 Salix brachista HOM05D005692 ORTHO05D006953 3.1e-43 178.3 92 84.8
TWI34G0948 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 5.3e-43 177.6 98 78.6
Thecc.09G090700 Theobroma cacao HOM05D005692 ORTHO05D006953 6.9e-43 177.2 98 81.6
Manes.03G032800 Manihot esculenta HOM05D005692 ORTHO05D006953 9.0e-43 176.8 98 81.6
Gohir.A02G019200 Gossypium hirsutum HOM05D005692 ORTHO05D006953 1.5e-42 176.0 98 81.6
Gohir.D02G022500 Gossypium hirsutum HOM05D005692 ORTHO05D006953 1.5e-42 176.0 98 81.6
vmacro06285 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 1.5e-42 176.0 93 80.6
vmacro23428 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 1.5e-42 176.0 93 80.6
MELO3C015461.2 Cucumis melo HOM05D005692 ORTHO05D006953 2.0e-42 175.6 94 80.9
EL10Ac2g04637 Beta vulgaris HOM05D005692 ORTHO05D006953 2.6e-42 175.3 93 81.7
Nitab4.5_0000540g0260 Nicotiana tabacum HOM05D005692 ORTHO05D006953 2.6e-42 175.3 93 81.7
Nitab4.5_0009931g0010 Nicotiana tabacum HOM05D005692 ORTHO05D006953 2.6e-42 175.3 93 81.7
Ah.10g037300 Amaranthus hybridus HOM05D005692 ORTHO05D006953 3.4e-42 174.9 93 82.8
Duzib151G0847 Durio zibethinus HOM05D005692 ORTHO05D006953 3.4e-42 174.9 92 82.6
CSS0005546 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 4.5e-42 174.5 98 79.6
CSS0025569 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 4.5e-42 174.5 98 79.6
CsaV3_1G040340 Cucumis sativus L. HOM05D005692 ORTHO05D006953 4.5e-42 174.5 94 80.9
Dinv36757 Davidia involucrata HOM05D005692 ORTHO05D006953 5.8e-42 174.1 98 79.6
Hund14283 Selenicereus undatus HOM05D005692 ORTHO05D006953 5.8e-42 174.1 93 81.7
Sc14g0000750 Simmondsia chinensis HOM05D005692 ORTHO05D006953 5.8e-42 174.1 93 80.6
Sopen12g003750 Solanum pennellii HOM05D005692 ORTHO05D006953 5.8e-42 174.1 93 80.6
Cc06_g11300 Coffea canephora HOM05D005692 ORTHO05D006953 7.6e-42 173.7 96 79.2
Cfa003097 Carpinus fangiana HOM05D005692 ORTHO05D006953 1.0e-41 173.3 91 82.4
Peaxi162Scf00015g00716 Petunia axillaris HOM05D005692 ORTHO05D006953 1.0e-41 173.3 93 80.6
PGSC0003DMG400000281 Solanum tuberosum HOM05D005692 ORTHO05D006953 1.0e-41 173.3 93 79.6
Solyc12g008810.2 Solanum lycopersicum HOM05D005692 ORTHO05D006953 1.3e-41 172.9 93 79.6
Sed0014309 Sechium edule HOM05D005692 ORTHO05D006953 2.9e-41 171.8 92 82.6
Oeu039606.1 Olea europaea HOM05D005692 ORTHO05D006953 3.8e-41 171.4 93 79.6
Ciclev10010392m.g Citrus clementina HOM05D005692 ORTHO05D006953 4.9e-41 171.0 91 80.2
CAN.G1241.20 Capsicum annuum HOM05D005692 ORTHO05D006953 6.5e-41 170.6 93 76.3
Cpa.g.sc20.158 Carica papaya HOM05D005692 ORTHO05D006953 8.4e-41 170.2 98 79.6
Nitab4.5_0003152g0130 Nicotiana tabacum HOM05D005692 ORTHO05D006953 8.4e-41 170.2 93 80.6
CiPaw.03G217300 Carya illinoinensis HOM05D005692 ORTHO05D006953 1.1e-40 169.9 98 76.5
Rhsim03G0233100 Rhododendron simsii HOM05D005692 ORTHO05D006953 1.1e-40 169.9 94 76.6
arahy.Tifrunner.gnm1.ann1.JM0M9B Arachis hypogaea HOM05D005692 ORTHO05D006953 1.4e-40 169.5 99 75.8
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 1.4e-40 169.5 99 75.8
PGR102G3100 Punica granatum HOM05D005692 ORTHO05D006953 1.4e-40 169.5 98 75.5
Atru.BG.21.p Acer truncatum HOM05D005692 ORTHO05D006953 1.9e-40 169.1 89 82.0
Glyma.18G151700 Glycine max HOM05D005692 ORTHO05D006953 1.9e-40 169.1 95 76.8
Nn8g38892 Nelumbo nucifera HOM05D005692 ORTHO05D006953 2.5e-40 168.7 98 77.6
Psat6g162800 Pisum sativum HOM05D005692 ORTHO05D006953 2.5e-40 168.7 93 77.4
Eucgr.C03889 Eucalyptus grandis HOM05D005692 ORTHO05D006953 3.2e-40 168.3 91 81.3
Glyma.08G343600 Glycine max HOM05D005692 ORTHO05D006953 3.2e-40 168.3 95 76.8
Migut.J00600 Erythranthe guttata HOM05D005692 ORTHO05D006953 4.2e-40 167.9 93 78.5
Migut.J01065 Erythranthe guttata HOM05D005692 ORTHO05D006953 4.2e-40 167.9 93 78.5
SGA_v2.0_scaffold62G21600 Striga asiatica HOM05D005692 ORTHO05D006953 4.2e-40 167.9 99 73.7
Duzib187G1084 Durio zibethinus HOM05D005692 ORTHO05D006953 5.5e-40 167.5 98 74.5
Nn6g35447 Nelumbo nucifera HOM05D005692 ORTHO05D006953 5.5e-40 167.5 98 77.6
HanXRQChr10g0319271 Helianthus annuus HOM05D005692 ORTHO05D006953 7.1e-40 167.2 98 74.5
DCAR_011984 Daucus carota HOM05D005692 ORTHO05D006953 9.3e-40 166.8 96 69.8
Psat6g183720 Pisum sativum HOM05D005692 ORTHO05D006953 9.3e-40 166.8 93 76.3
Ca_07409_v3 Cicer arietinum L. HOM05D005692 ORTHO05D006953 1.2e-39 166.4 93 78.5
TAR626G0225 Trochodendron aralioides HOM05D005692 ORTHO05D006953 2.1e-39 165.6 98 75.5
ECA234G3968 Erigeron canadensis HOM05D005692 ORTHO05D006953 2.7e-39 165.2 98 72.4
Lalb_Chr03g0041061 Lupinus albus HOM05D005692 ORTHO05D006953 2.7e-39 165.2 95 71.6
Medtr7g051450 Medicago truncatula HOM05D005692 ORTHO05D006953 2.7e-39 165.2 92 76.1
Phvul.008G136000 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 2.7e-39 165.2 93 75.3
SGA_v2.0_scaffold852G53671 Striga asiatica HOM05D005692 ORTHO05D006953 2.7e-39 165.2 99 72.7
Atru.BG.266.p Acer truncatum HOM05D005692 ORTHO05D006953 3.5e-39 164.9 89 79.8
AUR62033506 Chenopodium quinoa HOM05D005692 ORTHO05D006953 3.5e-39 164.9 113 68.1
Phvul.005G056600 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 4.6e-39 164.5 93 74.2
SGA_v2.0_scaffold33G13431 Striga asiatica HOM05D005692 ORTHO05D006953 6.0e-39 164.1 103 70.9
Migut.H00760 Erythranthe guttata HOM05D005692 ORTHO05D006953 7.9e-39 163.7 94 75.5
Medtr7g021900 Medicago truncatula HOM05D005692 ORTHO05D006953 7.9e-39 163.7 92 76.1
Lj1g0023726 Lotus japonicus HOM05D005692 ORTHO05D006953 1.0e-38 163.3 99 72.7
Duzib187G0878 Durio zibethinus HOM05D005692 ORTHO05D006953 1.3e-38 162.9 98 75.5
Psat6g183640 Pisum sativum HOM05D005692 ORTHO05D006953 1.3e-38 162.9 93 75.3
HanXRQChr12g0354791 Helianthus annuus HOM05D005692 ORTHO05D006953 2.3e-38 162.2 98 71.4
Lsat_1_v5_gn_5_145440 Lactuca sativa HOM05D005692 ORTHO05D006953 3.0e-38 161.8 98 70.4
Phvul.008G136200 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 3.0e-38 161.8 93 74.2
TWI32G0831 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 6.7e-38 160.6 98 74.5
THA.LOC104801884 Tarenaya hassleriana HOM05D005692 ORTHO05D006953 8.7e-38 160.2 98 73.5
Migut.H01159 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.9e-37 159.1 93 74.2
GSVIVG01015215001 Vitis vinifera HOM05D005692 ORTHO05D006953 1.9e-37 159.1 108 68.5
Psat6g183440 Pisum sativum HOM05D005692 ORTHO05D006953 4.3e-37 157.9 93 74.2
MBI13_g44212_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 5.7e-37 157.5 98 70.4
MBI14_g41836_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 5.7e-37 157.5 98 70.4
HPP92_009139 Vanilla planifolia HOM05D005692 ORTHO05D006953 9.7e-37 156.8 98 69.4
VMungo1383G2743 Vigna mungo HOM05D005692 ORTHO05D006953 1.6e-36 156.0 115 62.6
unitig_748.g8121 Utricularia gibba HOM05D005692 ORTHO05D006953 2.8e-36 155.2 99 68.7
PSO210G0626 Papaver somniferum HOM05D005692 ORTHO05D006953 4.8e-36 154.5 89 71.9
PSO210G2337 Papaver somniferum HOM05D005692 ORTHO05D006953 4.8e-36 154.5 89 71.9
Actinidia29885 Actinidia chinensis HOM05D003753 ORTHO05D005081 3.1e-35 151.8 89 71.9
CARHR237500 Cardamine hirsuta HOM05D005692 ORTHO05D006953 1.2e-34 149.8 95 69.5
BcaC09g51744 Brassica carinata HOM05D005692 ORTHO05D006953 1.5e-34 149.4 95 69.5
Aa31LG2G20910 Aethionema arabicum HOM05D005692 ORTHO05D006953 2.0e-34 149.1 95 68.4
Thhalv10026646m.g Eutrema salsugineum HOM05D005692 ORTHO05D006953 2.0e-34 149.1 95 69.5
AL7G22650 Arabidopsis lyrata HOM05D005692 ORTHO05D006953 2.6e-34 148.7 93 69.9
AT4G29660 Arabidopsis thaliana HOM05D005692 ORTHO05D006953 2.6e-34 148.7 93 69.9
Carub.0007s1086 Capsella rubella HOM05D005692 ORTHO05D006953 2.6e-34 148.7 93 69.9
Os05g0540200 Oryza sativa ssp. japonica HOM05D005692 ORTHO05D006953 2.6e-34 148.7 99 67.7
ATR0602G199 Amborella trichopoda HOM05D005692 ORTHO05D006953 3.4e-34 148.3 91 71.4
SHI00379 Sapria himalayana HOM05D005692 ORTHO05D006953 3.4e-34 148.3 78 80.8
BcaC09g52211 Brassica carinata HOM05D005692 ORTHO05D006953 7.6e-34 147.1 93 68.8
A01p08470 Brassica napus HOM05D005692 ORTHO05D006953 7.6e-34 147.1 93 68.8
C01p09830 Brassica napus HOM05D005692 ORTHO05D006953 7.6e-34 147.1 93 68.8
BolC1t00945H Brassica oleracea HOM05D005692 ORTHO05D006953 7.6e-34 147.1 93 68.8
BraA01t00794Z Brassica rapa HOM05D005692 ORTHO05D006953 7.6e-34 147.1 93 68.8
Nitab4.5_0003079g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.0e-33 146.7 81 77.8
Sp7g27450 Schrenkiella parvula HOM05D005692 ORTHO05D006953 1.3e-33 146.4 93 69.9
Sp3g29900 Schrenkiella parvula HOM05D005692 ORTHO05D006953 1.7e-33 146.0 93 71.0
Peaxi162Scf00354g00223 Petunia axillaris HOM05D005692 ORTHO05D006953 2.2e-33 145.6 93 68.8
Aqoxy4G03142 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 1.9e-32 142.5 87 67.8
Nitab4.5_0000095g0140 Nicotiana tabacum HOM05D005692 ORTHO05D006953 3.6e-31 138.3 104 61.5
Nitab4.5_0008958g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.7e-28 129.4 78 73.1
Nitab4.5_0004795g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 8.2e-28 127.1 80 70.0
Peaxi162Scf00498g00124 Petunia axillaris HOM05D005692 ORTHO05D006953 1.1e-27 126.7 69 79.7
Aqoxy1G00378 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 5.3e-27 124.4 89 60.7
CDE06G0459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 4.5e-26 121.3 74 70.3
FAN19G3189 Fragaria x ananassa HOM05D005692 ORTHO05D006953 4.5e-26 121.3 61 91.8
SHI21206 Sapria himalayana HOM05D005692 ORTHO05D006953 2.5e-24 115.5 65 73.8
CDE06G1459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 3.2e-24 115.2 74 71.6
TPR.G24304 Trifolium pratense HOM05D005692 ORTHO05D006953 1.0e-22 110.2 106 50.9
Psat0s10921g0080 Pisum sativum HOM05D005692 ORTHO05D006953 4.4e-21 104.8 61 75.4
SGA_v2.0_scaffold33G13433 Striga asiatica HOM05D000524 ORTHO05D000381 5.7e-21 104.4 61 75.4
Mapoly0063s0096 Marchantia polymorpha HOM05D005692 ORTHO05D006953 2.7e-15 85.5 68 55.9
CBR_g36562 Chara braunii HOM05D005692 ORTHO05D006953 8.0e-15 84.0 70 50.0
Zm00001eb294300 Zea mays HOM05D005692 ORTHO05D006953 2.4e-11 72.4 61 55.7
Haze_25902 Corylus avellana HOM05D001256 ORTHO05D001141 1.3e-09 66.6 36 72.2
Pp3c13_20310 Physcomitrium patens HOM05D005692 ORTHO05D006953 2.7e-07 58.9 57 45.6


User provided reference genes

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