Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN26G0167 Fragaria x ananassa HOM05D008202 ORTHO05D010302 6.4e-31 136.7 67 100.0
FAN26G3206 Fragaria x ananassa HOM05D008202 ORTHO05D010302 6.4e-31 136.7 67 100.0
FvH4_1g06280 Fragaria vesca HOM05D008202 ORTHO05D010302 1.4e-25 119.0 61 96.7
FAN19G1093 Fragaria x ananassa HOM05D008202 ORTHO05D010302 1.4e-25 119.0 61 96.7
FAN23G0175 Fragaria x ananassa HOM05D008202 ORTHO05D010302 1.4e-25 119.0 61 96.7
RcHm_v2.0_Chr2g0091981 Rosa chinensis HOM05D008202 ORTHO05D010302 3.3e-19 97.8 53 90.6
Ciclev10010342m.g Citrus clementina HOM05D008202 ORTHO05D010302 3.4e-16 87.8 58 74.1
Ciclev10027258m.g Citrus clementina HOM05D008202 ORTHO05D010302 6.4e-15 83.6 58 70.7
MD02G1066600 Malus domestica HOM05D008202 ORTHO05D010302 6.4e-15 83.6 60 73.3
Prupe.7G218700 Prunus persica HOM05D008202 ORTHO05D010302 1.9e-14 82.0 60 70.0
Peaxi162Scf00720g00418 Petunia axillaris HOM05D008202 ORTHO05D010302 5.5e-14 80.5 57 71.9
Cc06_g10540 Coffea canephora HOM05D008202 ORTHO05D010302 7.9e-13 76.6 57 63.2
TWI63G1052 Tripterygium wilfordii HOM05D008202 ORTHO05D010302 7.9e-13 76.6 47 72.3
CiPaw.04G157000 Carya illinoinensis HOM05D008202 ORTHO05D010302 2.3e-12 75.1 58 67.2
DCAR_028656 Daucus carota HOM05D008202 ORTHO05D010302 2.3e-12 75.1 59 61.0
SGA_v2.0_scaffold512G52633 Striga asiatica HOM05D008202 ORTHO05D010302 2.3e-12 75.1 53 67.9
Hma1.2p1_0386F.1_g141760 Hydrangea macrophylla HOM05D008202 ORTHO05D010302 3.0e-12 74.7 59 66.1
Haze_25829 Corylus avellana HOM05D008202 ORTHO05D010302 5.1e-12 73.9 58 62.1
Oeu018577.1 Olea europaea HOM05D008202 ORTHO05D010302 5.1e-12 73.9 59 62.7
EL10Ac8g18376 Beta vulgaris HOM05D008202 ORTHO05D010302 6.7e-12 73.6 59 55.9
CSS0001567 Camellia sinensis var. sinensis HOM05D008202 ORTHO05D010302 6.7e-12 73.6 59 61.0
Manes.03G026600 Manihot esculenta HOM05D008202 ORTHO05D010302 6.7e-12 73.6 44 75.0
Manes.04G125801 Manihot esculenta HOM05D008202 ORTHO05D010302 6.7e-12 73.6 44 75.0
Manes.13G078801 Manihot esculenta HOM05D008202 ORTHO05D010302 6.7e-12 73.6 44 75.0
vmacro10849 Vaccinium macrocarpon HOM05D008202 ORTHO05D010302 6.7e-12 73.6 57 61.4
Actinidia39781 Actinidia chinensis HOM05D008202 ORTHO05D010302 8.7e-12 73.2 59 62.7
Dinv42250 Davidia involucrata HOM05D008202 ORTHO05D010302 1.1e-11 72.8 57 64.9
Ah.14g082540 Amaranthus hybridus HOM05D008202 ORTHO05D010302 1.9e-11 72.0 59 55.9
Ah.14g083220 Amaranthus hybridus HOM05D008202 ORTHO05D010302 1.9e-11 72.0 59 55.9
CiPaw.04G155900 Carya illinoinensis HOM05D008202 ORTHO05D010302 2.5e-11 71.6 58 65.5
HanXRQChr12g0358111 Helianthus annuus HOM05D008202 ORTHO05D010302 2.5e-11 71.6 57 63.2
Migut.K00545 Erythranthe guttata HOM05D008202 ORTHO05D010302 3.3e-11 71.2 46 71.7
Rhsim05G0039400 Rhododendron simsii HOM05D008202 ORTHO05D010302 3.3e-11 71.2 57 56.1
Solyc04g058130.3 Solanum lycopersicum HOM05D008202 ORTHO05D010302 3.3e-11 71.2 67 58.2
Thecc.09G099700 Theobroma cacao HOM05D008202 ORTHO05D010302 3.3e-11 71.2 57 59.6
Actinidia17520 Actinidia chinensis HOM05D008202 ORTHO05D010302 4.3e-11 70.9 58 60.3
Lsat_1_v5_gn_8_98261 Lactuca sativa HOM05D008202 ORTHO05D010302 4.3e-11 70.9 46 67.4
Dinv36682 Davidia involucrata HOM05D008202 ORTHO05D010302 5.6e-11 70.5 56 62.5
MSTRG.19550 Avicennia marina HOM05D008202 ORTHO05D010302 7.4e-11 70.1 59 57.6
PGSC0003DMG400046448 Solanum tuberosum HOM05D001685 ORTHO05D006653 9.6e-11 69.7 58 63.8
COL.COLO4_34733 Corchorus olitorius HOM05D008202 ORTHO05D010302 1.3e-10 69.3 57 59.6
Medtr6g088800 Medicago truncatula HOM05D008202 ORTHO05D010302 2.1e-10 68.6 56 58.9
Sc18g0001520 Simmondsia chinensis HOM05D008202 ORTHO05D010302 2.1e-10 68.6 43 65.1
Gohir.A06G067500 Gossypium hirsutum HOM05D008202 ORTHO05D010302 2.8e-10 68.2 61 59.0
AUR62010887 Chenopodium quinoa HOM05D008202 ORTHO05D010302 6.2e-10 67.0 45 66.7
AUR62021399 Chenopodium quinoa HOM05D008202 ORTHO05D010302 6.2e-10 67.0 45 66.7
GSVIVG01015295001 Vitis vinifera HOM05D008202 ORTHO05D010302 1.8e-09 65.5 59 57.6
Nn8g39054 Nelumbo nucifera HOM05D008202 ORTHO05D010302 5.3e-09 63.9 44 65.9
Gorai.010G077500 Gossypium raimondii HOM05D008202 ORTHO05D010302 6.9e-09 63.5 57 57.9
CDE08G1102 Ceratophyllum demersum HOM05D008202 ORTHO05D010302 1.2e-08 62.8 53 52.8
Atru.chr7.1471 Acer truncatum HOM05D008202 ORTHO05D010302 2.0e-08 62.0 46 60.9
Ciclev10027039m.g Citrus clementina HOM05D008202 ORTHO05D010302 2.6e-08 61.6 31 87.1
Lalb_Chr14g0371911 Lupinus albus HOM05D008202 ORTHO05D010302 2.6e-08 61.6 53 54.7
Nitab4.5_0002557g0010 Nicotiana tabacum HOM05D001685 ORTHO05D006653 3.4e-08 61.2 53 52.8
CsaV3_2G001850 Cucumis sativus L. HOM05D008202 ORTHO05D010302 1.0e-07 59.7 41 61.0
ClCG11G002070 Citrullus lanatus HOM05D008202 ORTHO05D010302 1.7e-07 58.9 58 50.0
Psat1g048280 Pisum sativum HOM05D008202 ORTHO05D010302 1.7e-07 58.9 43 58.1
MBI01_g10122_MAGBIO Magnolia biondii HOM05D003005 ORTHO05D004170 4.9e-07 57.4 51 54.9
HPP92_009087 Vanilla planifolia HOM05D008202 ORTHO05D010302 4.9e-07 57.4 57 47.4
ATR0705G156 Amborella trichopoda HOM05D008202 ORTHO05D010302 8.4e-07 56.6 42 57.1
CAN.G1325.3 Capsicum annuum HOM05D001685 ORTHO05D006653 8.4e-07 56.6 43 58.1
FAN28G0380 Fragaria x ananassa HOM05D008202 ORTHO05D010302 8.4e-07 56.6 30 96.7
Eucgr.C03726 Eucalyptus grandis HOM05D008202 ORTHO05D010302 2.5e-06 55.1 45 51.1
Gohir.D06G066100 Gossypium hirsutum HOM05D008202 ORTHO05D010302 2.5e-06 55.1 57 54.4
Zm00001eb371180 Zea mays HOM05D008202 ORTHO05D010302 5.5e-06 53.9 38 60.5


User provided reference genes

Program Settings