Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G0595 Fragaria x ananassa HOM05D004652 ORTHO05D005634 3.0e-90 335.1 164 100.0
FAN26G0096 Fragaria x ananassa HOM05D004652 ORTHO05D005634 3.0e-90 335.1 164 100.0
FvH4_1g16330 Fragaria vesca HOM05D004652 ORTHO05D005634 3.9e-90 334.7 164 99.4
FAN19G0057 Fragaria x ananassa HOM05D004652 ORTHO05D005634 3.9e-90 334.7 164 99.4
RcHm_v2.0_Chr2g0106191 Rosa chinensis HOM05D004652 ORTHO05D005634 3.4e-86 321.6 164 96.3
FAN28G0632 Fragaria x ananassa HOM05D004652 ORTHO05D005634 1.3e-85 319.7 168 94.6
CiPaw.01G015800 Carya illinoinensis HOM05D004652 ORTHO05D005634 2.8e-80 302.0 164 86.6
Lalb_Chr05g0213341 Lupinus albus HOM05D004652 ORTHO05D005634 4.8e-80 301.2 164 86.0
CiPaw.01G015500 Carya illinoinensis HOM05D004652 ORTHO05D005634 6.3e-80 300.8 164 86.0
Dinv30009 Davidia involucrata HOM05D004652 ORTHO05D005634 1.8e-79 299.3 164 87.2
MD02G1175800 Malus domestica HOM05D004652 ORTHO05D005634 2.0e-78 295.8 164 87.8
Glyma.11G054000 Glycine max HOM05D004652 ORTHO05D005634 5.9e-78 294.3 164 83.5
QL06p040720 Quercus lobata HOM05D004652 ORTHO05D005634 5.9e-78 294.3 163 83.4
VMungo1215G2858 Vigna mungo HOM05D004652 ORTHO05D005634 5.9e-78 294.3 164 82.3
Phvul.002G017100 Phaseolus vulgaris HOM05D004652 ORTHO05D005634 1.0e-77 293.5 164 82.3
Glyma.01G188100 Glycine max HOM05D004652 ORTHO05D005634 2.2e-77 292.4 164 82.3
Haze_15373 Corylus avellana HOM05D004652 ORTHO05D005634 2.9e-77 292.0 164 82.3
Peaxi162Scf00549g00023 Petunia axillaris HOM05D004652 ORTHO05D005634 2.9e-77 292.0 164 82.3
arahy.Tifrunner.gnm1.ann1.8Y90C0 Arachis hypogaea HOM05D004652 ORTHO05D005634 6.5e-77 290.8 164 81.7
arahy.Tifrunner.gnm1.ann1.EFTP1R Arachis hypogaea HOM05D004652 ORTHO05D005634 6.5e-77 290.8 164 81.7
Lj7A73G20 Lonicera japonica HOM05D004652 ORTHO05D005634 1.1e-76 290.0 164 82.3
Nn5g30355 Nelumbo nucifera HOM05D004652 ORTHO05D005634 1.4e-76 289.7 162 84.0
TPR.G19549 Trifolium pratense HOM05D004652 ORTHO05D005634 1.9e-76 289.3 162 82.1
Medtr7g104350 Medicago truncatula HOM05D004652 ORTHO05D005634 3.2e-76 288.5 164 81.1
Lj2g0023089 Lotus japonicus HOM05D004652 ORTHO05D005634 4.2e-76 288.1 164 79.9
Actinidia36476 Actinidia chinensis HOM05D004652 ORTHO05D005634 7.2e-76 287.3 164 82.3
GSVIVG01022087001 Vitis vinifera HOM05D004652 ORTHO05D005634 7.2e-76 287.3 164 81.7
Hma1.2p1_0670F.1_g200440 Hydrangea macrophylla HOM05D004652 ORTHO05D005634 9.4e-76 287.0 164 82.3
Nitab4.5_0001221g0030 Nicotiana tabacum HOM05D004652 ORTHO05D005634 9.4e-76 287.0 164 81.1
Psat3g034240 Pisum sativum HOM05D004652 ORTHO05D005634 9.4e-76 287.0 164 81.1
MELO3C020851.2 Cucumis melo HOM05D004652 ORTHO05D005634 1.2e-75 286.6 164 82.3
CSS0025726 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 1.6e-75 286.2 164 79.9
CANSAT25G2702 Cannabis sativa HOM05D004652 ORTHO05D005634 1.6e-75 286.2 164 82.3
CsaV3_2G016420 Cucumis sativus L. HOM05D004652 ORTHO05D005634 2.1e-75 285.8 164 81.7
Nitab4.5_0002765g0060 Nicotiana tabacum HOM05D004652 ORTHO05D005634 6.1e-75 284.3 164 79.9
Solyc02g093170.4 Solanum lycopersicum HOM05D004652 ORTHO05D005634 2.3e-74 282.3 164 78.7
Sed0013827 Sechium edule HOM05D004652 ORTHO05D005634 3.0e-74 282.0 164 80.5
Sopen02g037740 Solanum pennellii HOM05D004652 ORTHO05D005634 3.0e-74 282.0 163 78.5
PGR102G1991 Punica granatum HOM05D004652 ORTHO05D005634 5.2e-74 281.2 164 79.3
Manes.13G121100 Manihot esculenta HOM05D004652 ORTHO05D005634 6.7e-74 280.8 164 81.1
SGA_v2.0_scaffold143G35809 Striga asiatica HOM05D004652 ORTHO05D005634 8.8e-74 280.4 164 80.5
DCAR_010876 Daucus carota HOM05D004652 ORTHO05D005634 1.1e-73 280.0 164 79.9
Thecc.02G103600 Theobroma cacao HOM05D004652 ORTHO05D005634 1.1e-73 280.0 164 82.3
PGSC0003DMG400004028 Solanum tuberosum HOM05D004652 ORTHO05D005634 1.5e-73 279.6 164 77.4
MSTRG.23735 Avicennia marina HOM05D004652 ORTHO05D005634 2.0e-73 279.3 164 78.7
Aqoxy6G01262 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 3.3e-73 278.5 164 80.5
PSO675G7477 Papaver somniferum HOM05D004652 ORTHO05D005634 9.7e-73 276.9 164 76.8
SGA_v2.0_scaffold34G13618 Striga asiatica HOM05D004652 ORTHO05D005634 9.7e-73 276.9 164 79.3
Thecc.01G060000 Theobroma cacao HOM05D004652 ORTHO05D005634 2.2e-72 275.8 164 79.9
Potri.007G045900 Populus trichocarpa HOM05D004652 ORTHO05D005634 2.8e-72 275.4 164 76.8
TWI31G1310 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 3.7e-72 275.0 164 79.3
Gohir.A13G042200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 4.8e-72 274.6 164 79.9
HanXRQChr15g0490761 Helianthus annuus HOM05D004652 ORTHO05D005634 4.8e-72 274.6 164 76.8
Gorai.013G045700 Gossypium raimondii HOM05D004652 ORTHO05D005634 6.3e-72 274.2 164 79.3
PSO541G5706 Papaver somniferum HOM05D004652 ORTHO05D005634 1.1e-71 273.5 164 76.2
EL10Ac9g22324 Beta vulgaris HOM05D004652 ORTHO05D005634 1.4e-71 273.1 164 79.9
unitig_736.g22389 Utricularia gibba HOM05D004652 ORTHO05D005634 1.4e-71 273.1 165 78.8
ECA232G0198 Erigeron canadensis HOM05D004652 ORTHO05D005634 2.4e-71 272.3 164 75.6
Lsat_1_v5_gn_4_165120 Lactuca sativa HOM05D004652 ORTHO05D005634 2.4e-71 272.3 164 75.6
Ciclev10025986m.g Citrus clementina HOM05D004652 ORTHO05D005634 3.1e-71 271.9 164 78.0
Ah.01g017900 Amaranthus hybridus HOM05D004652 ORTHO05D005634 5.3e-71 271.2 164 78.0
TWI09G0879 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 5.3e-71 271.2 163 78.5
vmacro05311 Vaccinium macrocarpon HOM05D004652 ORTHO05D005634 5.3e-71 271.2 164 76.8
Sabra09G0075900 Salix brachista HOM05D004652 ORTHO05D005634 7.0e-71 270.8 164 78.7
GSVIVG01031712001 Vitis vinifera HOM05D004652 ORTHO05D005634 9.1e-71 270.4 164 79.9
ATR0724G029 Amborella trichopoda HOM05D004652 ORTHO05D005634 1.2e-70 270.0 162 77.8
AUR62013234 Chenopodium quinoa HOM05D004652 ORTHO05D005634 1.2e-70 270.0 164 78.0
Cc07_g06170 Coffea canephora HOM05D004652 ORTHO05D005634 1.2e-70 270.0 164 76.2
Hund00119 Selenicereus undatus HOM05D004652 ORTHO05D005634 1.2e-70 270.0 164 77.4
Duzib132G1249 Durio zibethinus HOM05D004652 ORTHO05D005634 1.6e-70 269.6 164 77.4
COL.COLO4_24563 Corchorus olitorius HOM05D004652 ORTHO05D005634 2.6e-70 268.9 164 78.0
Duzib147G0331 Durio zibethinus HOM05D004652 ORTHO05D005634 2.6e-70 268.9 164 77.4
Actinidia12037 Actinidia chinensis HOM05D004652 ORTHO05D005634 4.5e-70 268.1 193 69.4
Cpa.g.sc55.119 Carica papaya HOM05D004652 ORTHO05D005634 4.5e-70 268.1 164 76.8
Migut.H00415 Erythranthe guttata HOM05D004652 ORTHO05D005634 4.5e-70 268.1 162 75.9
Potri.009G099600 Populus trichocarpa HOM05D004652 ORTHO05D005634 4.5e-70 268.1 164 77.4
AUR62010252 Chenopodium quinoa HOM05D004652 ORTHO05D005634 7.7e-70 267.3 164 77.4
Ciclev10030127m.g Citrus clementina HOM05D004652 ORTHO05D005634 7.7e-70 267.3 164 75.6
Eucgr.I01131 Eucalyptus grandis HOM05D004652 ORTHO05D005634 7.7e-70 267.3 167 75.4
Atru.chr5.2643 Acer truncatum HOM05D004652 ORTHO05D005634 1.7e-69 266.2 164 76.2
Atru.chr5.2649 Acer truncatum HOM05D004652 ORTHO05D005634 1.7e-69 266.2 164 76.2
Atru.chr3.293 Acer truncatum HOM05D004652 ORTHO05D005634 2.9e-69 265.4 164 75.6
CDE02G2369 Ceratophyllum demersum HOM05D004652 ORTHO05D005634 8.5e-69 263.8 164 75.6
CSS0033708 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 1.1e-68 263.5 149 80.5
Gorai.007G215700 Gossypium raimondii HOM05D004652 ORTHO05D005634 1.5e-68 263.1 164 76.2
Gohir.A11G195100 Gossypium hirsutum HOM05D004652 ORTHO05D005634 3.2e-68 261.9 164 75.6
Gohir.D11G201200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 5.5e-68 261.2 164 76.2
THA.LOC104807263 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 6.1e-67 257.7 164 73.8
Sabra07G0041100 Salix brachista HOM05D004652 ORTHO05D005634 1.8e-66 256.1 198 63.1
Eucgr.H01690 Eucalyptus grandis HOM05D004652 ORTHO05D005634 3.0e-66 255.4 164 71.3
Os03g0109700 Oryza sativa ssp. japonica HOM05D004652 ORTHO05D005634 3.0e-66 255.4 164 72.0
Sc07g0000730 Simmondsia chinensis HOM05D004652 ORTHO05D005634 6.7e-66 254.2 162 72.8
Thhalv10025679m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 2.6e-65 252.3 163 73.6
Hund13540 Selenicereus undatus HOM05D004652 ORTHO05D005634 7.5e-65 250.8 161 70.2
HPP92_024094 Vanilla planifolia HOM05D004652 ORTHO05D005634 9.7e-65 250.4 159 75.5
Carub.0007s0633 Capsella rubella HOM05D004652 ORTHO05D005634 4.8e-64 248.1 164 70.7
AL7G17310 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 8.2e-64 247.3 164 72.0
Sp7g31800 Schrenkiella parvula HOM05D004652 ORTHO05D005634 1.4e-63 246.5 163 71.8
AT4G34090 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 1.8e-63 246.1 164 71.3
THA.LOC104807591 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 2.4e-63 245.7 164 72.0
CARHR242200 Cardamine hirsuta HOM05D004652 ORTHO05D005634 5.3e-63 244.6 164 70.1
Aa31LG2G16510 Aethionema arabicum HOM05D002471 ORTHO05D003712 7.0e-63 244.2 164 72.6
BcaNung03359 Brassica carinata HOM05D004652 ORTHO05D005634 7.0e-63 244.2 163 69.9
EL10Ac6g15724 Beta vulgaris HOM05D004652 ORTHO05D005634 2.7e-62 242.3 162 66.7
AT2G23370 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 4.5e-62 241.5 164 70.1
AUR62003906 Chenopodium quinoa HOM05D004652 ORTHO05D005634 1.3e-61 240.0 162 64.8
CARHR293000 Cardamine hirsuta HOM05D004652 ORTHO05D005634 1.7e-61 239.6 164 69.5
AUR62001905 Chenopodium quinoa HOM05D004652 ORTHO05D005634 5.0e-61 238.0 162 65.4
Aa31LG7G13600 Aethionema arabicum HOM05D004652 ORTHO05D005634 6.5e-61 237.7 179 65.9
AL4G13280 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 1.9e-60 236.1 164 69.5
Carub.0004s0257 Capsella rubella HOM05D004652 ORTHO05D005634 7.2e-60 234.2 164 67.7
SEGI_25477 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 1.6e-59 233.0 161 67.1
SEGI_26044 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 1.6e-59 233.0 161 67.1
BcaC07g40988 Brassica carinata HOM05D004652 ORTHO05D005634 2.7e-59 232.3 164 67.1
C08p39900 Brassica napus HOM05D004652 ORTHO05D005634 2.7e-59 232.3 164 67.1
BolC8t51563H Brassica oleracea HOM05D004652 ORTHO05D005634 2.7e-59 232.3 164 67.1
A09p56940 Brassica napus HOM05D004652 ORTHO05D005634 3.6e-59 231.9 164 67.1
Aqoxy2G01254 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 3.0e-58 228.8 140 80.0
Sp4g02380 Schrenkiella parvula HOM05D004652 ORTHO05D005634 3.0e-58 228.8 164 67.1
SMO367G0761 Selaginella moellendorffii HOM05D004652 ORTHO05D005634 5.2e-58 228.0 159 66.7
Thhalv10000243m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 8.8e-58 227.3 175 63.4
BraA09t41086Z Brassica rapa HOM05D004652 ORTHO05D005634 1.2e-57 226.9 164 65.9
Zm00001eb404220 Zea mays HOM05D004652 ORTHO05D005634 1.3e-56 223.4 147 70.1
Mapoly0032s0004 Marchantia polymorpha HOM05D004652 ORTHO05D005634 1.1e-55 220.3 160 62.5
Pp3c4_13980 Physcomitrium patens HOM05D004652 ORTHO05D005634 4.1e-55 218.4 159 64.2
Oeu049898.1 Olea europaea HOM05D004652 ORTHO05D005634 1.7e-53 213.0 118 83.9
Rhsim10G0114700 Rhododendron simsii HOM05D004652 ORTHO05D005634 1.1e-52 210.3 118 80.5
AagrBONN_evm.TU.Sc2ySwM_362.2895 Anthoceros agrestis HOM05D004652 ORTHO05D005634 3.3e-52 208.8 159 61.6
Pp3c13_18360 Physcomitrium patens HOM05D004652 ORTHO05D005634 3.6e-51 205.3 159 61.6
C07p60150 Brassica napus HOM05D004652 ORTHO05D005634 4.7e-51 204.9 163 62.6
BolC7t46455H Brassica oleracea HOM05D004652 ORTHO05D005634 4.7e-51 204.9 163 62.6
Prupe.6G231900 Prunus persica HOM05D004652 ORTHO05D005634 8.0e-51 204.1 105 90.5
A03p62590 Brassica napus HOM05D004652 ORTHO05D005634 1.0e-50 203.8 163 62.0
BraA03t15329Z Brassica rapa HOM05D004652 ORTHO05D005634 1.0e-50 203.8 163 62.0
CBR_g34458 Chara braunii HOM05D004652 ORTHO05D005634 4.4e-49 198.4 159 56.0
TAR381G1342 Trochodendron aralioides HOM05D004652 ORTHO05D005634 3.1e-47 192.2 112 79.5
Aqoxy4G02413 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 4.7e-43 178.3 112 78.6
Oeu004436.1 Olea europaea HOM05D004652 ORTHO05D005634 1.3e-40 170.2 169 59.8
Ah.02g125990 Amaranthus hybridus HOM05D004652 ORTHO05D005634 1.0e-37 160.6 161 49.7
ClCG02G012270 Citrullus lanatus HOM05D004652 ORTHO05D005634 3.3e-36 155.6 80 86.2
Cpa.g.sc200.27 Carica papaya HOM05D004652 ORTHO05D005634 1.6e-35 153.3 180 47.8
Ca_08994_v3 Cicer arietinum L. HOM05D004652 ORTHO05D005634 7.5e-33 144.4 162 49.4
TAR381G1519 Trochodendron aralioides HOM05D004652 ORTHO05D005634 2.2e-32 142.9 163 49.1
ECA248G0229 Erigeron canadensis HOM05D004652 ORTHO05D005634 3.7e-32 142.1 87 73.6
COL.COLO4_32629 Corchorus olitorius HOM05D004652 ORTHO05D005634 4.9e-32 141.7 164 48.2
Sabra07G0040900 Salix brachista HOM05D015619 ORTHO05D009044 1.4e-23 113.6 87 65.5
PRCOL_00001748 Prasinoderma coloniale HOM05D004652 ORTHO05D005634 3.9e-21 105.5 168 36.9
Cre13.g563150 Chlamydomonas reinhardtii HOM05D004652 ORTHO05D005634 1.2e-19 100.5 170 32.4
Gohir.D13G040700 Gossypium hirsutum HOM05D004652 ORTHO05D005634 1.8e-18 96.7 53 83.0
Potri.001G304401 Populus trichocarpa HOM05D004652 ORTHO05D005634 8.9e-18 94.4 75 58.7
CDE01G0594 Ceratophyllum demersum HOM05D000934 ORTHO05D000746 9.9e-17 90.9 105 44.8
Eucgr.I01132 Eucalyptus grandis HOM05D004652 ORTHO05D005634 9.9e-17 90.9 52 75.0
MCO15G669 Micromonas commoda HOM05D004652 ORTHO05D005634 2.4e-15 86.3 164 34.8
Cc00_g07740 Coffea canephora HOM05D004652 ORTHO05D005634 2.8e-11 72.8 48 68.8
Lalb_Chr09g0323281 Lupinus albus HOM05D004652 ORTHO05D005634 3.1e-10 69.3 138 33.3
MCO09G010 Micromonas commoda HOM05D004652 ORTHO05D005634 6.9e-10 68.2 212 32.5


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