Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G3832 Fragaria x ananassa HOM05D007799 ORTHO05D009854 3.9e-145 518.1 255 100.0
FAN16G3425 Fragaria x ananassa HOM05D007799 ORTHO05D009854 3.6e-143 511.5 255 98.4
FAN21G3556 Fragaria x ananassa HOM05D007799 ORTHO05D009854 8.1e-143 510.4 255 98.8
FAN11G0145 Fragaria x ananassa HOM05D007799 ORTHO05D009854 2.4e-142 508.8 255 97.6
FvH4_3g05030 Fragaria vesca HOM05D007799 ORTHO05D009854 4.0e-142 508.1 255 97.6
RcHm_v2.0_Chr5g0014941 Rosa chinensis HOM05D007799 ORTHO05D009854 6.4e-132 474.2 255 91.8
Prupe.4G085700 Prunus persica HOM05D007799 ORTHO05D009854 8.2e-111 404.1 256 78.1
MD10G1258100 Malus domestica HOM05D007799 ORTHO05D009854 1.0e-100 370.5 256 72.7
MD05G1279400 Malus domestica HOM05D007799 ORTHO05D009854 1.1e-99 367.1 256 73.0
QL05p055084 Quercus lobata HOM05D007799 ORTHO05D009854 2.3e-89 332.8 251 64.9
Cfa000897 Carpinus fangiana HOM05D007799 ORTHO05D009854 4.8e-87 325.1 248 64.5
CANSAT35G1982 Cannabis sativa HOM05D007799 ORTHO05D009854 5.9e-85 318.2 259 62.9
Thecc.06G144300 Theobroma cacao HOM05D007799 ORTHO05D009854 3.2e-83 312.4 248 60.9
Duzib192G0648 Durio zibethinus HOM05D007799 ORTHO05D009854 3.6e-82 308.9 248 59.3
CiPaw.10G088800 Carya illinoinensis HOM05D007799 ORTHO05D009854 6.1e-82 308.1 252 59.5
Manes.15G125000 Manihot esculenta HOM05D007799 ORTHO05D009854 1.8e-81 306.6 244 62.3
COL.COLO4_31009 Corchorus olitorius HOM05D007799 ORTHO05D009854 5.2e-81 305.1 220 65.5
Ciclev10016395m.g Citrus clementina HOM05D007799 ORTHO05D009854 4.4e-80 302.0 248 60.1
Duzib235G1165 Durio zibethinus HOM05D007799 ORTHO05D009854 4.4e-80 302.0 243 62.6
Lj6g0006831 Lotus japonicus HOM05D007799 ORTHO05D009854 1.4e-78 297.0 250 56.0
CiPaw.09G119600 Carya illinoinensis HOM05D007799 ORTHO05D009854 3.1e-78 295.8 252 59.9
Atru.chr10.1081 Acer truncatum HOM05D007799 ORTHO05D009854 7.0e-78 294.7 217 65.9
Nitab4.5_0005655g0010 Nicotiana tabacum HOM05D007799 ORTHO05D009854 1.3e-76 290.4 240 59.2
Oeu032721.1 Olea europaea HOM05D007799 ORTHO05D009854 2.3e-76 289.7 220 61.8
Medtr2g018670 Medicago truncatula HOM05D007799 ORTHO05D009854 2.9e-76 289.3 238 58.4
Glyma.15G090500 Glycine max HOM05D007799 ORTHO05D009854 8.6e-76 287.7 250 55.2
Potri.011G081701 Populus trichocarpa HOM05D007799 ORTHO05D009854 1.9e-75 286.6 221 62.9
Rhsim13G0117700 Rhododendron simsii HOM05D007799 ORTHO05D009854 1.9e-75 286.6 222 60.8
Glyma.13G221700 Glycine max HOM05D007799 ORTHO05D009854 5.5e-75 285.0 250 54.8
PGSC0003DMG400002292 Solanum tuberosum HOM05D007799 ORTHO05D009854 1.2e-74 283.9 239 57.3
Peaxi162Scf00045g02414 Petunia axillaris HOM05D007799 ORTHO05D009854 2.1e-74 283.1 239 56.1
PGR083G2472 Punica granatum HOM05D007799 ORTHO05D009854 8.0e-74 281.2 222 60.8
Eucgr.D00266 Eucalyptus grandis HOM05D007799 ORTHO05D009854 1.8e-73 280.0 246 57.7
Ca_00511_v3 Cicer arietinum L. HOM05D007799 ORTHO05D009854 3.0e-73 279.3 234 56.0
TPR.G26257 Trifolium pratense HOM05D007799 ORTHO05D009854 3.0e-73 279.3 240 57.5
Gorai.010G237400 Gossypium raimondii HOM05D007799 ORTHO05D009854 1.2e-72 277.3 216 62.5
Oeu031191.1 Olea europaea HOM05D007799 ORTHO05D009854 2.0e-72 276.6 217 61.8
CSS0034958 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 2.6e-72 276.2 226 60.6
Haze_05684 Corylus avellana HOM05D007799 ORTHO05D009854 2.6e-72 276.2 248 57.7
Gohir.A06G196000 Gossypium hirsutum HOM05D007799 ORTHO05D009854 2.6e-72 276.2 216 61.1
Glyma.05G143400 Glycine max HOM05D007799 ORTHO05D009854 4.4e-72 275.4 250 54.8
Glyma.08G099800 Glycine max HOM05D007799 ORTHO05D009854 4.4e-72 275.4 250 55.2
Lalb_Chr20g0117681 Lupinus albus HOM05D007799 ORTHO05D009854 9.8e-72 274.2 236 56.8
VMungo0540G2150 Vigna mungo HOM05D007799 ORTHO05D009854 9.8e-72 274.2 251 54.2
CSS0035706 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 1.3e-71 273.9 226 59.7
Migut.K01168 Erythranthe guttata HOM05D007799 ORTHO05D009854 1.3e-71 273.9 208 62.0
Psat1g192080 Pisum sativum HOM05D007799 ORTHO05D009854 1.3e-71 273.9 238 55.9
Gohir.D06G203500 Gossypium hirsutum HOM05D007799 ORTHO05D009854 3.7e-71 272.3 211 62.6
Cc00_g02020 Coffea canephora HOM05D007799 ORTHO05D009854 1.8e-70 270.0 240 53.3
SalBow8G4130 Salvia bowleyana HOM05D007799 ORTHO05D009854 1.3e-68 263.8 224 57.6
MBI02_g12199_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 3.9e-68 262.3 233 53.6
DCAR_003890 Daucus carota HOM05D007799 ORTHO05D009854 1.5e-67 260.4 244 52.5
Lalb_Chr13g0294011 Lupinus albus HOM05D007799 ORTHO05D009854 1.5e-67 260.4 249 51.0
Phvul.002G177900 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 1.5e-67 260.4 234 56.0
VMungo0251G0945 Vigna mungo HOM05D007799 ORTHO05D009854 5.6e-67 258.5 233 54.9
Lalb_Chr15g0086631 Lupinus albus HOM05D007799 ORTHO05D009854 7.3e-67 258.1 241 53.9
MBI18_g11218_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 1.4e-65 253.8 245 50.6
Medtr8g079475 Medicago truncatula HOM05D007799 ORTHO05D009854 6.8e-65 251.5 236 53.4
HanXRQChr15g0482011 Helianthus annuus HOM05D007799 ORTHO05D009854 8.9e-65 251.1 235 51.9
Nitab4.5_0000315g0030 Nicotiana tabacum HOM05D007799 ORTHO05D009854 1.2e-64 250.8 240 53.8
Lsat_1_v5_gn_7_27461 Lactuca sativa HOM05D007799 ORTHO05D009854 7.5e-64 248.1 249 51.0
GSVIVG01021549001 Vitis vinifera HOM05D007799 ORTHO05D009854 1.7e-63 246.9 222 55.4
vmacro03431 Vaccinium macrocarpon HOM05D007799 ORTHO05D009854 6.4e-63 245.0 245 52.2
arahy.Tifrunner.gnm1.ann1.NZ6SRJ Arachis hypogaea HOM05D007799 ORTHO05D009854 2.4e-62 243.0 237 51.5
arahy.Tifrunner.gnm1.ann1.80ML42 Arachis hypogaea HOM05D007799 ORTHO05D009854 3.2e-62 242.7 237 51.9
arahy.Tifrunner.gnm1.ann1.GW4I6G Arachis hypogaea HOM05D002205 ORTHO05D004847 3.9e-60 235.7 251 49.4
arahy.Tifrunner.gnm1.ann1.W0WEAA Arachis hypogaea HOM05D007799 ORTHO05D009854 1.5e-59 233.8 234 51.3
Nn3g20329 Nelumbo nucifera HOM05D007799 ORTHO05D009854 1.2e-58 230.7 250 48.4
HanXRQChr04g0116571 Helianthus annuus HOM05D007799 ORTHO05D009854 2.1e-58 229.9 235 49.4
Actinidia32344 Actinidia chinensis HOM05D007799 ORTHO05D009854 4.7e-58 228.8 192 57.8
ECA236G2997 Erigeron canadensis HOM05D007799 ORTHO05D009854 1.4e-57 227.3 228 48.2
Dinv32213 Davidia involucrata HOM05D007799 ORTHO05D009854 5.8e-56 221.9 177 63.3
HPP92_026553 Vanilla planifolia HOM05D007799 ORTHO05D009854 1.4e-54 217.2 219 45.2
CsaV3_1G036880 Cucumis sativus L. HOM05D007799 ORTHO05D009854 2.4e-54 216.5 222 48.2
ClCG03G006490 Citrullus lanatus HOM05D007799 ORTHO05D009854 4.6e-53 212.2 236 47.5
TAR624G0778 Trochodendron aralioides HOM05D007799 ORTHO05D009854 3.0e-52 209.5 159 64.8
Sed0012400 Sechium edule HOM05D007799 ORTHO05D009854 2.1e-50 203.4 215 52.1
DCAR_007872 Daucus carota HOM05D007799 ORTHO05D009854 2.8e-50 203.0 260 41.9
CDE12G0863 Ceratophyllum demersum HOM05D007799 ORTHO05D009854 1.1e-49 201.1 219 48.9
Phvul.006G168136 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 1.7e-47 193.7 197 50.3
TPR.G9572 Trifolium pratense HOM05D007799 ORTHO05D009854 5.4e-46 188.7 185 51.4
HPP92_028169 Vanilla planifolia HOM05D007799 ORTHO05D009854 7.1e-46 188.3 224 40.2
ATR1098G006 Amborella trichopoda HOM05D007799 ORTHO05D009854 1.7e-44 183.7 220 42.3
Sopen08g008720 Solanum pennellii HOM05D007799 ORTHO05D009854 1.7e-39 167.2 156 53.2
Solyc08g023510.3 Solanum lycopersicum HOM05D007799 ORTHO05D009854 1.1e-38 164.5 148 54.7
MELO3C035703.2 Cucumis melo HOM05D007799 ORTHO05D009854 3.2e-30 136.3 171 43.3
Lj1C1169G11 Lonicera japonica HOM05D002205 ORTHO05D004847 2.3e-28 130.2 96 64.6
TPR.G18987 Trifolium pratense HOM05D007799 ORTHO05D009854 4.9e-23 112.5 80 63.8
HPP92_026526 Vanilla planifolia HOM05D007799 ORTHO05D009854 2.7e-21 106.7 84 50.0
SEGI_29226 Sequoiadendron giganteum HOM05D007799 ORTHO05D009854 8.4e-15 85.1 178 29.8


User provided reference genes

Program Settings