Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G3637 Fragaria x ananassa HOM05D006854 ORTHO05D045930 3.1e-81 305.1 152 100.0
FvH4_3g45251 Fragaria vesca HOM05D006854 ORTHO05D045930 1.0e-52 210.3 121 85.1
FAN25G0720 Fragaria x ananassa HOM05D006854 ORTHO05D017963 5.7e-35 151.4 151 57.6
FAN21G2812 Fragaria x ananassa HOM05D010503 ORTHO05D017963 2.7e-32 142.5 154 57.1
FvH4_3g45030 Fragaria vesca HOM05D006854 ORTHO05D017963 8.5e-31 137.5 152 53.9
RcHm_v2.0_Chr5g0082881 Rosa chinensis HOM05D010503 ORTHO05D017963 2.7e-29 132.5 146 53.4
FAN08G2932 Fragaria x ananassa HOM05D010503 ORTHO05D017963 6.8e-28 127.9 163 49.1
FAN08G3287 Fragaria x ananassa HOM05D010503 ORTHO05D017963 6.8e-28 127.9 163 49.1
FAN11G2503 Fragaria x ananassa HOM05D006854 ORTHO05D035528 4.4e-27 125.2 146 52.7
FAN11G2338 Fragaria x ananassa HOM05D006854 ORTHO05D017963 5.7e-27 124.8 151 50.3
FvH4_3g45070 Fragaria vesca HOM05D006854 ORTHO05D035528 9.8e-27 124.0 146 52.7
FvH4_3g45050 Fragaria vesca HOM05D006854 ORTHO05D035528 4.8e-26 121.7 156 52.6
FvH4_5g09840 Fragaria vesca HOM05D010503 ORTHO05D017963 8.5e-23 110.9 146 47.9
FvH4_5g04834 Fragaria vesca HOM05D006854 ORTHO05D029389 4.0e-20 102.1 164 42.7
FAN18G0896 Fragaria x ananassa HOM05D006854 ORTHO05D011215 9.8e-19 97.4 177 37.3
FvH4_5g08080 Fragaria vesca HOM05D006854 ORTHO05D011215 1.7e-18 96.7 180 37.2
FvH4_5g08121 Fragaria vesca HOM05D006854 ORTHO05D011215 6.3e-18 94.7 177 36.7
RcHm_v2.0_Chr7g0189311 Rosa chinensis HOM05D000082 ORTHO05D000038 1.1e-17 94.0 126 48.4
RcHm_v2.0_Chr4g0410881 Rosa chinensis HOM05D006854 ORTHO05D046355 1.0e-15 87.4 202 34.2
RcHm_v2.0_Chr7g0191221 Rosa chinensis HOM05D006854 ORTHO05D011215 1.0e-15 87.4 180 34.4
RcHm_v2.0_Chr7g0194391 Rosa chinensis HOM05D006854 ORTHO05D035501 2.5e-14 82.8 117 46.2
FvH4_5g06850 Fragaria vesca HOM05D006854 ORTHO05D011215 3.3e-14 82.4 112 41.1
FAN08G0245 Fragaria x ananassa HOM05D006854 ORTHO05D011215 3.3e-14 82.4 158 37.3
FAN18G3526 Fragaria x ananassa HOM05D006854 ORTHO05D210570 4.3e-14 82.0 112 46.4
RcHm_v2.0_Chr7g0191591 Rosa chinensis HOM05D006854 ORTHO05D011215 4.3e-14 82.0 186 34.9
FvH4_5g04830 Fragaria vesca HOM05D006854 ORTHO05D022664 5.6e-14 81.6 112 46.4
FAN18G1646 Fragaria x ananassa HOM05D006854 ORTHO05D011215 7.3e-14 81.3 117 44.4
FvH4_1g21520 Fragaria vesca HOM05D006854 ORTHO05D011215 2.1e-13 79.7 114 40.4
FAN19G1045 Fragaria x ananassa HOM05D006854 ORTHO05D011215 2.1e-13 79.7 114 40.4
FAN08G3474 Fragaria x ananassa HOM05D006854 ORTHO05D022664 6.1e-13 78.2 112 45.5
FAN08G3482 Fragaria x ananassa HOM05D006854 ORTHO05D205589 8.0e-13 77.8 109 45.0
FAN13G1691 Fragaria x ananassa HOM05D006854 ORTHO05D022664 1.0e-12 77.4 111 42.3
FAN04G2532 Fragaria x ananassa HOM05D006854 ORTHO05D022664 1.4e-12 77.0 119 42.0
FvH4_5g04833 Fragaria vesca HOM05D006854 ORTHO05D029560 1.8e-12 76.6 186 36.0
FAN23G0565 Fragaria x ananassa HOM05D006854 ORTHO05D011215 1.8e-12 76.6 105 41.0
FAN08G2487 Fragaria x ananassa HOM05D006854 ORTHO05D029560 2.3e-12 76.3 111 46.8
FAN18G1003 Fragaria x ananassa HOM05D006854 ORTHO05D011215 2.3e-12 76.3 122 39.3
RcHm_v2.0_Chr7g0194201 Rosa chinensis HOM05D006854 ORTHO05D000038 2.3e-12 76.3 204 31.4
FvH4_5g06931 Fragaria vesca HOM05D006854 ORTHO05D011215 3.0e-12 75.9 138 38.4
FAN04G2885 Fragaria x ananassa HOM05D006854 ORTHO05D011215 5.2e-12 75.1 168 32.7
RcHm_v2.0_Chr7g0190371 Rosa chinensis HOM05D006854 ORTHO05D011215 5.2e-12 75.1 174 33.9
FAN13G1069 Fragaria x ananassa HOM05D006854 ORTHO05D011215 6.8e-12 74.7 110 43.6
RcHm_v2.0_Chr6g0269041 Rosa chinensis HOM05D006854 ORTHO05D000038 6.8e-12 74.7 206 31.6
RcHm_v2.0_Chr7g0194301 Rosa chinensis HOM05D006854 ORTHO05D022664 6.8e-12 74.7 120 43.3
FvH4_6g41381 Fragaria vesca HOM05D006854 ORTHO05D035430 4.4e-11 72.0 110 39.1
FAN18G4459 Fragaria x ananassa HOM05D006854 ORTHO05D000038 4.4e-11 72.0 113 41.6
FvH4_5g04570 Fragaria vesca HOM05D000082 ORTHO05D000038 2.2e-10 69.7 110 36.4
FAN08G0630 Fragaria x ananassa HOM05D006854 ORTHO05D029560 2.2e-10 69.7 108 46.3
FvH4_5g06910 Fragaria vesca HOM05D006854 ORTHO05D011215 2.9e-10 69.3 156 34.6
FvH4_5g04821 Fragaria vesca HOM05D006854 ORTHO05D022664 3.7e-10 68.9 111 41.4
FAN13G0959 Fragaria x ananassa HOM05D006854 ORTHO05D029560 3.7e-10 68.9 185 35.1
FAN18G3954 Fragaria x ananassa HOM05D006854 ORTHO05D011215 3.7e-10 68.9 112 42.9
FvH4_5g04820 Fragaria vesca HOM05D006854 ORTHO05D035501 4.9e-10 68.6 62 56.5
RcHm_v2.0_Chr6g0255331 Rosa chinensis HOM05D006854 ORTHO05D029561 1.1e-09 67.4 133 35.3
FvH4_6g41383 Fragaria vesca HOM05D006854 ORTHO05D000038 7.0e-09 64.7 125 38.4
FvH4_6g52331 Fragaria vesca HOM05D000082 ORTHO05D000038 1.2e-08 63.9 108 40.7
FvH4_6g52340 Fragaria vesca HOM05D000082 ORTHO05D000038 1.2e-08 63.9 108 40.7
FAN04G2330 Fragaria x ananassa HOM05D006854 ORTHO05D035501 1.6e-08 63.5 62 53.2
FvH4_5g09910 Fragaria vesca HOM05D006854 ORTHO05D046355 2.0e-08 63.2 143 32.2
FvH4_3g45040 Fragaria vesca HOM05D010503 ORTHO05D035703 2.7e-08 62.8 163 30.1
FvH4_5g06960 Fragaria vesca HOM05D006854 ORTHO05D011215 2.7e-08 62.8 148 31.8
FAN11G1665 Fragaria x ananassa HOM05D010503 ORTHO05D035703 2.7e-08 62.8 163 30.1
FAN04G0586 Fragaria x ananassa HOM05D006854 ORTHO05D011215 3.5e-08 62.4 163 33.1
RcHm_v2.0_Chr7g0236181 Rosa chinensis HOM05D006854 ORTHO05D000038 1.0e-07 60.8 132 31.1
RcHm_v2.0_Chr0c11g0499451 Rosa chinensis HOM05D006854 ORTHO05D000038 1.3e-07 60.5 132 31.1
FAN13G1373 Fragaria x ananassa HOM05D006854 ORTHO05D011215 1.7e-07 60.1 163 32.5
RcHm_v2.0_Chr2g0171151 Rosa chinensis HOM05D000082 ORTHO05D000038 2.3e-07 59.7 88 42.0
FvH4_2g05200 Fragaria vesca HOM05D041790 ORTHO05D029561 3.0e-07 59.3 133 33.8
RcHm_v2.0_Chr5g0082901 Rosa chinensis HOM05D010503 ORTHO05D022602 3.0e-07 59.3 92 41.3
FAN12G0007 Fragaria x ananassa HOM05D006854 ORTHO05D011215 3.9e-07 58.9 105 38.1
RcHm_v2.0_Chr2g0171221 Rosa chinensis HOM05D000082 ORTHO05D000038 6.6e-07 58.2 113 37.2
RcHm_v2.0_Chr2g0171261 Rosa chinensis HOM05D000082 ORTHO05D000038 6.6e-07 58.2 79 44.3
RcHm_v2.0_Chr2g0171341 Rosa chinensis HOM05D000082 ORTHO05D000038 6.6e-07 58.2 83 42.2
FAN08G0051 Fragaria x ananassa HOM05D006854 ORTHO05D011215 1.5e-06 57.0 117 32.5
FAN12G2874 Fragaria x ananassa HOM05D006854 ORTHO05D011215 1.5e-06 57.0 105 38.1
FAN18G1761 Fragaria x ananassa HOM05D006854 ORTHO05D011215 1.5e-06 57.0 60 46.7
RcHm_v2.0_Chr2g0171251 Rosa chinensis HOM05D000082 ORTHO05D000038 1.5e-06 57.0 77 45.5
FvH4_7g15890 Fragaria vesca HOM05D000082 ORTHO05D000038 2.5e-06 56.2 146 27.4
FAN24G0313 Fragaria x ananassa HOM05D006854 ORTHO05D000038 4.3e-06 55.5 110 36.4
FvH4_6g50641 Fragaria vesca HOM05D000082 ORTHO05D000038 5.6e-06 55.1 97 37.1
RcHm_v2.0_Chr5g0012991 Rosa chinensis HOM05D013845 ORTHO05D020717 7.3e-06 54.7 110 31.8
FAN14G3657 Fragaria x ananassa HOM05D006854 ORTHO05D000038 9.5e-06 54.3 72 43.1


User provided reference genes

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