Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G3578 Fragaria x ananassa HOM05D006956 ORTHO05D008824 1.6e-109 399.4 201 100.0
FAN21G1707 Fragaria x ananassa HOM05D006956 ORTHO05D008824 6.7e-100 367.5 193 95.3
RcHm_v2.0_Chr5g0026331 Rosa chinensis HOM05D006956 ORTHO05D008824 2.6e-67 259.2 139 92.1
FvH4_3g15651 Fragaria vesca HOM05D006956 ORTHO05D008824 3.4e-67 258.8 139 93.5
FAN11G3326 Fragaria x ananassa HOM05D006956 ORTHO05D008824 5.9e-64 248.1 156 83.3
MD10G1203100 Malus domestica HOM05D006956 ORTHO05D008824 7.8e-56 221.1 139 79.1
Prupe.4G139000 Prunus persica HOM05D006956 ORTHO05D008824 3.6e-53 212.2 127 84.3
QL04p076576 Quercus lobata HOM05D006956 ORTHO05D008824 8.0e-53 211.1 138 75.4
GSVIVG01020406001 Vitis vinifera HOM05D006956 ORTHO05D008824 3.1e-52 209.1 138 76.8
Prupe.4G141800 Prunus persica HOM05D006956 ORTHO05D008824 5.2e-52 208.4 124 83.9
COL.COLO4_07377 Corchorus olitorius HOM05D006956 ORTHO05D008824 2.6e-51 206.1 138 73.9
Gorai.007G335600 Gossypium raimondii HOM05D006956 ORTHO05D008824 2.6e-51 206.1 156 67.9
Hma1.2p1_0334F.1_g128720 Hydrangea macrophylla HOM05D006956 ORTHO05D008824 5.8e-51 204.9 138 71.7
Thecc.07G151600 Theobroma cacao HOM05D006956 ORTHO05D008824 5.8e-51 204.9 137 74.5
Rhsim04G0005600 Rhododendron simsii HOM05D006956 ORTHO05D008824 9.8e-51 204.1 139 73.4
Haze_03154 Corylus avellana HOM05D006956 ORTHO05D008824 1.3e-50 203.8 137 75.2
Dinv19614 Davidia involucrata HOM05D006956 ORTHO05D008824 1.7e-50 203.4 138 72.5
TWI39G0297 Tripterygium wilfordii HOM05D006956 ORTHO05D008824 4.9e-50 201.8 137 73.0
Eucgr.A00498 Eucalyptus grandis HOM05D006956 ORTHO05D008824 6.4e-50 201.4 138 69.6
TAR362G0399 Trochodendron aralioides HOM05D006956 ORTHO05D008824 8.3e-50 201.1 138 71.7
MSTRG.13068 Avicennia marina HOM05D006956 ORTHO05D008824 1.1e-49 200.7 151 64.9
Manes.06G172400 Manihot esculenta HOM05D006956 ORTHO05D008824 1.4e-49 200.3 138 70.3
Nn7g38051 Nelumbo nucifera HOM05D006956 ORTHO05D008824 1.9e-49 199.9 138 71.0
CSS0000379 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 3.2e-49 199.1 134 70.1
Cc05_g16140 Coffea canephora HOM05D006956 ORTHO05D008824 5.4e-49 198.4 141 69.5
Aqoxy1G01495 Aquilegia oxysepala HOM05D006956 ORTHO05D008824 7.0e-49 198.0 136 71.3
vmacro00957 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 9.2e-49 197.6 138 69.6
Atru.chr9.1519 Acer truncatum HOM05D006956 ORTHO05D008824 1.2e-48 197.2 138 70.3
CSS0020916 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 1.6e-48 196.8 132 70.5
Peaxi162Scf00286g00448 Petunia axillaris HOM05D006956 ORTHO05D008824 2.0e-48 196.4 166 60.8
Potri.001G439000 Populus trichocarpa HOM05D006956 ORTHO05D008824 2.0e-48 196.4 138 70.3
MD17G1180100 Malus domestica HOM05D006956 ORTHO05D008824 2.7e-48 196.1 130 77.7
CiPaw.11G066300 Carya illinoinensis HOM05D006956 ORTHO05D008824 3.5e-48 195.7 138 70.3
CAN.G710.39 Capsicum annuum HOM05D006956 ORTHO05D008824 6.0e-48 194.9 132 71.2
CANSAT54G1214 Cannabis sativa HOM05D006956 ORTHO05D008824 7.8e-48 194.5 136 72.1
Gohir.A11G291500 Gossypium hirsutum HOM05D006956 ORTHO05D008824 7.8e-48 194.5 156 66.0
Migut.H01688 Erythranthe guttata HOM05D006956 ORTHO05D008824 3.0e-47 192.6 139 66.2
Cfa010808 Carpinus fangiana HOM05D006956 ORTHO05D008824 3.9e-47 192.2 137 71.5
SalBow5G4858 Salvia bowleyana HOM05D006956 ORTHO05D008824 8.6e-47 191.0 137 68.6
Sabra16G0296900 Salix brachista HOM05D006956 ORTHO05D008824 1.5e-46 190.3 145 67.6
Solyc09g098220.3 Solanum lycopersicum HOM05D006956 ORTHO05D008824 4.3e-46 188.7 132 69.7
Sopen09g036160 Solanum pennellii HOM05D006956 ORTHO05D008824 4.3e-46 188.7 132 69.7
Ciclev10022296m.g Citrus clementina HOM05D006956 ORTHO05D008824 7.3e-46 188.0 138 68.1
Lj3g0018815 Lotus japonicus HOM05D006956 ORTHO05D008824 7.3e-46 188.0 137 66.4
Cfa010806 Carpinus fangiana HOM05D006956 ORTHO05D008824 9.5e-46 187.6 126 74.6
Actinidia35432 Actinidia chinensis HOM05D006956 ORTHO05D008824 2.8e-45 186.0 147 66.0
Phvul.005G057800 Phaseolus vulgaris HOM05D006956 ORTHO05D008824 3.6e-45 185.7 137 64.2
Glyma.15G256600 Glycine max HOM05D006956 ORTHO05D008824 6.2e-45 184.9 139 64.0
TPR.G9744 Trifolium pratense HOM05D006956 ORTHO05D008824 6.2e-45 184.9 137 66.4
Lj3g0016125 Lotus japonicus HOM05D006956 ORTHO05D008824 1.1e-44 184.1 147 59.9
Psat1g012040 Pisum sativum HOM05D006956 ORTHO05D008824 1.8e-44 183.3 138 65.9
arahy.Tifrunner.gnm1.ann1.JC2BA5 Arachis hypogaea HOM05D006956 ORTHO05D008824 2.3e-44 183.0 137 62.8
VMungo1080G0523 Vigna mungo HOM05D006956 ORTHO05D008824 2.3e-44 183.0 174 52.9
Medtr2g069340 Medicago truncatula HOM05D006956 ORTHO05D008824 3.1e-44 182.6 137 65.0
Ca_03670_v3 Cicer arietinum L. HOM05D006956 ORTHO05D008824 4.0e-44 182.2 147 60.5
PGR142G1185 Punica granatum HOM05D006956 ORTHO05D008824 1.5e-43 180.3 125 72.0
BraA09t41455Z Brassica rapa HOM05D006956 ORTHO05D008824 2.6e-43 179.5 137 65.7
Sed0013658 Sechium edule HOM05D006956 ORTHO05D008824 3.4e-43 179.1 138 66.7
Thhalv10008810m.g Eutrema salsugineum HOM05D006956 ORTHO05D008824 4.4e-43 178.7 137 66.4
Lalb_Chr20g0108711 Lupinus albus HOM05D006956 ORTHO05D008824 4.4e-43 178.7 137 62.0
C08p44410 Brassica napus HOM05D006956 ORTHO05D008824 9.8e-43 177.6 137 65.0
Nitab4.5_0001526g0100 Nicotiana tabacum HOM05D006956 ORTHO05D008824 9.8e-43 177.6 126 68.3
A09p60820 Brassica napus HOM05D006956 ORTHO05D008824 1.3e-42 177.2 137 65.0
HPP92_011671 Vanilla planifolia HOM05D006956 ORTHO05D008824 2.2e-42 176.4 134 61.9
MELO3C019670.2 Cucumis melo HOM05D006956 ORTHO05D008824 4.9e-42 175.3 129 68.2
AT1G16590 Arabidopsis thaliana HOM05D006956 ORTHO05D008824 8.3e-42 174.5 138 64.5
AUR62042418 Chenopodium quinoa HOM05D006956 ORTHO05D008824 1.1e-41 174.1 124 66.9
CsaV3_6G013760 Cucumis sativus L. HOM05D006956 ORTHO05D008824 1.1e-41 174.1 139 65.5
BolC8t51982H Brassica oleracea HOM05D006956 ORTHO05D008824 1.4e-41 173.7 134 65.7
CARHR017060 Cardamine hirsuta HOM05D006956 ORTHO05D008824 1.4e-41 173.7 139 64.0
AUR62026907 Chenopodium quinoa HOM05D006956 ORTHO05D008824 2.4e-41 172.9 127 65.4
Zm00001eb198240 Zea mays HOM05D006956 ORTHO05D008824 5.4e-41 171.8 147 61.2
AL1G28750 Arabidopsis lyrata HOM05D006956 ORTHO05D008824 7.0e-41 171.4 137 64.2
FAN16G1261 Fragaria x ananassa HOM05D006956 ORTHO05D008824 6.0e-40 168.3 115 77.4
SGA_v2.0_scaffold49G18176 Striga asiatica HOM05D006956 ORTHO05D008824 6.0e-40 168.3 143 59.4
arahy.Tifrunner.gnm1.ann1.82TPB7 Arachis hypogaea HOM05D006956 ORTHO05D008824 7.8e-40 167.9 168 51.2
ClCG02G018480 Citrullus lanatus HOM05D006956 ORTHO05D008824 2.3e-39 166.4 154 57.8
THA.LOC104808124 Tarenaya hassleriana HOM05D006956 ORTHO05D008824 1.9e-38 163.3 139 62.6
Carub.0001s1634 Capsella rubella HOM05D006956 ORTHO05D008824 7.3e-38 161.4 139 59.7
PSO210G3417 Papaver somniferum HOM05D006956 ORTHO05D008824 1.6e-37 160.2 125 61.6
PSO223G0077 Papaver somniferum HOM05D006956 ORTHO05D008824 1.6e-37 160.2 134 59.0
CDE05G1956 Ceratophyllum demersum HOM05D003342 ORTHO05D003861 1.1e-36 157.5 158 53.8
Aa31LG7G1120 Aethionema arabicum HOM05D006956 ORTHO05D008824 2.2e-34 149.8 143 54.5
HanXRQChr08g0231891 Helianthus annuus HOM05D006956 ORTHO05D008824 4.1e-33 145.6 135 54.8
RcHm_v2.0_Chr5g0026311 Rosa chinensis HOM05D006956 ORTHO05D008824 4.6e-32 142.1 75 94.7
PGSC0003DMG400014067 Solanum tuberosum HOM05D006956 ORTHO05D008466 2.3e-31 139.8 100 67.0
ECA247G3084 Erigeron canadensis HOM05D006956 ORTHO05D008824 2.1e-29 133.3 114 55.3
Sp1g14740 Schrenkiella parvula HOM05D006956 ORTHO05D008824 2.8e-29 132.9 137 52.6
Mapoly0023s0023 Marchantia polymorpha HOM05D006956 ORTHO05D008824 3.4e-27 125.9 127 47.2
MBI18_g45405_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 2.4e-25 119.8 102 58.8
Lju41A37T48 Lonicera japonica HOM05D006956 ORTHO05D008824 1.6e-24 117.1 84 63.1
Prupe.4G139100 Prunus persica HOM05D006956 ORTHO05D008824 1.6e-24 117.1 127 56.7
AagrBONN_evm.TU.Sc2ySwM_368.712 Anthoceros agrestis HOM05D006956 ORTHO05D008824 3.5e-24 115.9 120 47.5
Sc08g0007560 Simmondsia chinensis HOM05D006956 ORTHO05D008824 3.0e-23 112.8 91 57.1
MBI18_g44288_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 1.9e-22 110.2 76 71.1
Pp3c4_6830 Physcomitrium patens HOM05D006956 ORTHO05D008824 3.3e-22 109.4 128 40.6
SMO340G0149 Selaginella moellendorffii HOM05D006956 ORTHO05D008824 8.1e-21 104.8 124 39.5
Lsat_1_v5_gn_6_63040 Lactuca sativa HOM05D006956 ORTHO05D008824 4.0e-20 102.4 160 38.1
ATR0753G159 Amborella trichopoda HOM05D006956 ORTHO05D008824 9.0e-20 101.3 76 64.5
Pp3c4_6840 Physcomitrium patens HOM05D006956 ORTHO05D008824 1.7e-18 97.1 126 36.5
vmacro22747 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 4.9e-18 95.5 75 62.7
MD05G1220700 Malus domestica HOM05D006956 ORTHO05D008824 2.5e-14 83.2 82 53.7
QL04p076191 Quercus lobata HOM05D006956 ORTHO05D008824 7.3e-14 81.6 63 61.9
QL93p0133_0021 Quercus lobata HOM05D006956 ORTHO05D008824 7.3e-14 81.6 63 61.9
Cre13.g575333 Chlamydomonas reinhardtii HOM05D006956 ORTHO05D008824 9.6e-14 81.3 131 36.6
Cpa.g.sc67.70 Carica papaya HOM05D006956 ORTHO05D008824 1.4e-12 77.4 65 53.8
Glyma.08G170300 Glycine max HOM05D006956 ORTHO05D008824 1.4e-09 67.4 71 50.7
Lju41A37T47 Lonicera japonica HOM05D006956 ORTHO05D008824 7.9e-08 61.6 60 51.7
SEGI_37897 Sequoiadendron giganteum HOM05D006956 ORTHO05D008824 1.1e-06 57.8 64 42.2
TPR.G22507 Trifolium pratense HOM05D006956 ORTHO05D008824 1.1e-06 57.8 36 72.2
MCO02G468 Micromonas commoda HOM05D006956 ORTHO05D008824 1.5e-06 57.4 85 40.0
AagrBONN_evm.TU.Sc2ySwM_362.2804 Anthoceros agrestis HOM05D006956 ORTHO05D008824 3.3e-06 56.2 63 44.4


User provided reference genes

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