Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G3386 Fragaria x ananassa HOM05D000539 ORTHO05D000233 5.4e-116 421.0 214 100.0
FvH4_5g19271 Fragaria vesca HOM05D000539 ORTHO05D000233 7.0e-63 244.6 261 58.2
FAN06G1168 Fragaria x ananassa HOM05D000539 ORTHO05D000233 9.4e-60 234.2 261 56.3
FAN01G1775 Fragaria x ananassa HOM05D000539 ORTHO05D000233 5.7e-57 224.9 281 53.0
FAN14G5321 Fragaria x ananassa HOM05D000539 ORTHO05D000233 5.7e-57 224.9 261 54.8
FvH4_7g02152 Fragaria vesca HOM05D000539 ORTHO05D000233 1.4e-55 220.3 250 54.8
FAN24G3557 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.0e-54 216.5 244 56.6
FvH4_1g29807 Fragaria vesca HOM05D000539 ORTHO05D000233 8.5e-53 211.1 172 69.2
FAN03G1033 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.5e-52 210.3 258 53.1
FAN16G1830 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.3e-50 203.0 277 49.5
FvH4_4g16176 Fragaria vesca HOM05D000539 ORTHO05D000233 1.7e-48 196.8 220 59.1
FAN11G1109 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.7e-46 189.5 252 52.0
FAN21G0704 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.3e-45 186.4 207 57.5
FAN09G3363 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.6e-41 172.9 264 48.5
FvH4_2g18191 Fragaria vesca HOM05D000539 ORTHO05D000233 4.9e-40 168.7 232 51.3
FvH4_7g02602 Fragaria vesca HOM05D000539 ORTHO05D000233 1.1e-39 167.5 261 45.6
FvH4_3g14361 Fragaria vesca HOM05D000539 ORTHO05D000233 1.4e-39 167.2 261 45.6
FvH4_6g23071 Fragaria vesca HOM05D000539 ORTHO05D000233 2.5e-36 156.4 163 60.1
FvH4_6g20171 Fragaria vesca HOM05D000539 ORTHO05D000233 4.0e-34 149.1 139 64.0
FAN04G3167 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.3e-32 144.1 261 42.1
RcHm_v2.0_Chr7g0228371 Rosa chinensis HOM05D000539 ORTHO05D000233 1.3e-24 117.5 262 37.4
FAN07G2711 Fragaria x ananassa HOM05D000539 ORTHO05D000233 9.2e-23 111.3 204 40.7
FAN07G1416 Fragaria x ananassa HOM05D000539 ORTHO05D000233 6.0e-22 108.6 147 50.3
FAN02G4302 Fragaria x ananassa HOM05D000539 ORTHO05D000233 3.9e-21 105.9 240 36.7
RcHm_v2.0_Chr4g0401831 Rosa chinensis HOM05D000539 ORTHO05D000233 1.6e-19 100.5 254 32.7
RcHm_v2.0_Chr4g0391901 Rosa chinensis HOM05D000539 ORTHO05D000233 6.2e-19 98.6 230 35.2
FAN17G0233 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.4e-18 97.4 54 92.6
RcHm_v2.0_Chr1g0342101 Rosa chinensis HOM05D000539 ORTHO05D000233 2.3e-18 96.7 234 35.9
FAN28G0003 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.9e-16 89.7 158 43.0
FvH4_5g31521 Fragaria vesca HOM05D000539 ORTHO05D000233 5.4e-15 85.5 100 51.0
FAN10G1391 Fragaria x ananassa HOM05D000539 ORTHO05D000233 6.0e-14 82.0 94 52.1
RcHm_v2.0_Chr2g0090831 Rosa chinensis HOM05D000539 ORTHO05D000233 8.6e-13 78.2 141 37.6
FAN27G3263 Fragaria x ananassa HOM05D000539 ORTHO05D000233 9.6e-12 74.7 108 49.1
RcHm_v2.0_Chr3g0485221 Rosa chinensis HOM05D000539 ORTHO05D000233 6.2e-11 72.0 252 29.4
RcHm_v2.0_Chr7g0235651 Rosa chinensis HOM05D000539 ORTHO05D000233 5.2e-10 68.9 255 29.8
RcHm_v2.0_Chr2g0108861 Rosa chinensis HOM05D000539 ORTHO05D000233 6.9e-10 68.6 254 29.1
RcHm_v2.0_Chr3g0483461 Rosa chinensis HOM05D000539 ORTHO05D000233 1.2e-09 67.8 252 29.0
RcHm_v2.0_Chr2g0132431 Rosa chinensis HOM05D000539 ORTHO05D000233 2.6e-09 66.6 167 32.3
FvH4_4g09822 Fragaria vesca HOM05D000107 ORTHO05D000062 3.4e-09 66.2 255 29.8
FAN22G0531 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.2e-08 63.5 44 72.7
Rhsim01G0127800 Rhododendron simsii HOM05D000539 ORTHO05D000233 2.2e-08 63.5 200 26.5
Rhsim09G0096300 Rhododendron simsii HOM05D000539 ORTHO05D000233 2.2e-08 63.5 200 26.5
FvH4_3g26442 Fragaria vesca HOM05D000539 ORTHO05D000233 2.9e-08 63.2 248 25.8
FvH4_4g08651 Fragaria vesca HOM05D000539 ORTHO05D000233 2.9e-08 63.2 188 31.9
MELO3C034902.2 Cucumis melo HOM05D000539 ORTHO05D000233 3.8e-08 62.8 173 28.3
FAN18G1469 Fragaria x ananassa HOM05D000539 ORTHO05D000233 3.8e-08 62.8 126 35.7
FvH4_6g20174 Fragaria vesca HOM05D000539 ORTHO05D000592 8.4e-08 61.6 38 81.6
FAN02G3814 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.1e-07 61.2 26 96.2
PSO541G5385 Papaver somniferum HOM05D000539 ORTHO05D000233 1.1e-07 61.2 219 28.3
PSO675G7387 Papaver somniferum HOM05D000539 ORTHO05D000233 1.1e-07 61.2 219 28.3
RcHm_v2.0_Chr7g0191841 Rosa chinensis HOM05D000539 ORTHO05D000233 1.1e-07 61.2 175 32.0
RcHm_v2.0_Chr7g0196691 Rosa chinensis HOM05D000539 ORTHO05D000233 1.1e-07 61.2 175 32.0
FvH4_3g31744 Fragaria vesca HOM05D000539 ORTHO05D000233 1.4e-07 60.8 125 37.6
RcHm_v2.0_Chr4g0417051 Rosa chinensis HOM05D000539 ORTHO05D000233 1.4e-07 60.8 175 32.6
RcHm_v2.0_Chr5g0071741 Rosa chinensis HOM05D000539 ORTHO05D000233 1.9e-07 60.5 68 48.5
FAN22G2232 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.4e-07 60.1 38 84.2
RcHm_v2.0_Chr7g0227321 Rosa chinensis HOM05D000539 ORTHO05D000233 4.2e-07 59.3 254 28.3
FAN02G3231 Fragaria x ananassa HOM05D000539 ORTHO05D000233 5.4e-07 58.9 34 82.4
FAN05G3022 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.4e-07 58.9 167 29.9
FAN17G3107 Fragaria x ananassa HOM05D000539 ORTHO05D000233 9.3e-07 58.2 167 29.9
FAN25G0088 Fragaria x ananassa HOM05D000539 ORTHO05D000233 9.3e-07 58.2 167 29.9
FvH4_2g07146 Fragaria vesca HOM05D000539 ORTHO05D000233 1.2e-06 57.8 202 28.2
FAN16G0584 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.6e-06 57.4 248 26.6
FAN17G0771 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.6e-06 57.4 248 26.6
FAN24G2468 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.6e-06 57.4 248 26.6
FAN22G1565 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.1e-06 57.0 248 26.6
RcHm_v2.0_Chr2g0145261 Rosa chinensis HOM05D000539 ORTHO05D000233 2.1e-06 57.0 175 30.3
FAN02G4002 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.7e-06 56.6 36 83.3
RcHm_v2.0_Chr4g0407991 Rosa chinensis HOM05D000539 ORTHO05D000233 4.6e-06 55.8 254 28.0
RcHm_v2.0_Chr4g0393861 Rosa chinensis HOM05D000539 ORTHO05D000233 7.8e-06 55.1 254 27.6
RcHm_v2.0_Chr5g0072981 Rosa chinensis HOM05D000539 ORTHO05D000233 7.8e-06 55.1 255 27.8


User provided reference genes

Program Settings