Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G3354 Fragaria x ananassa HOM05D008227 ORTHO05D010399 4.0e-150 534.6 254 100.0
FAN11G0729 Fragaria x ananassa HOM05D008227 ORTHO05D010399 3.3e-88 328.9 210 78.6
FAN16G2273 Fragaria x ananassa HOM05D008227 ORTHO05D010399 1.7e-87 326.6 210 77.6
RcHm_v2.0_Chr5g0037671 Rosa chinensis HOM05D008227 ORTHO05D010399 1.5e-67 260.4 181 71.8
FvH4_3g21861 Fragaria vesca HOM05D008227 ORTHO05D010399 4.4e-64 248.8 203 65.0
Prupe.4G203700 Prunus persica HOM05D008227 ORTHO05D010399 1.1e-38 164.5 189 48.1
RcHm_v2.0_Chr5g0037641 Rosa chinensis HOM05D008227 ORTHO05D010399 3.2e-38 162.9 189 47.1
CiPaw.11G183900 Carya illinoinensis HOM05D008227 ORTHO05D010399 3.0e-36 156.4 199 44.7
Haze_09613 Corylus avellana HOM05D008227 ORTHO05D010399 1.8e-33 147.1 199 43.7
Cfa020413 Carpinus fangiana HOM05D008227 ORTHO05D010399 6.8e-33 145.2 199 43.2
QL08p013277 Quercus lobata HOM05D008227 ORTHO05D010399 5.8e-32 142.1 197 42.1
Thecc.07G052300 Theobroma cacao HOM05D008227 ORTHO05D010399 2.2e-31 140.2 201 40.3
Gohir.D05G365100 Gossypium hirsutum HOM05D008227 ORTHO05D010399 4.9e-31 139.0 201 40.8
Gorai.009G427100 Gossypium raimondii HOM05D008227 ORTHO05D010399 8.4e-31 138.3 201 40.8
Duzib213G0156 Durio zibethinus HOM05D008227 ORTHO05D010399 1.1e-30 137.9 201 39.8
Gohir.A04G022300 Gossypium hirsutum HOM05D008227 ORTHO05D010399 3.2e-30 136.3 201 40.3
MD11G1226600 Malus domestica HOM05D008227 ORTHO05D010399 4.7e-26 122.5 170 42.4
COL.COLO4_09573 Corchorus olitorius HOM05D008227 ORTHO05D010399 3.1e-25 119.8 208 38.5
TWI39G0949 Tripterygium wilfordii HOM05D008227 ORTHO05D010399 9.9e-24 114.8 196 37.8
BcaB06g26093 Brassica carinata HOM05D008227 ORTHO05D010399 2.1e-21 107.1 221 36.2
BcaB06g26127 Brassica carinata HOM05D008227 ORTHO05D010399 6.6e-20 102.1 221 34.8
A05p28900 Brassica napus HOM05D008227 ORTHO05D010399 8.7e-20 101.7 183 36.6
BraA05t21766Z Brassica rapa HOM05D008227 ORTHO05D010399 8.7e-20 101.7 183 36.6
CARHR096420 Cardamine hirsuta HOM05D008227 ORTHO05D010399 3.3e-19 99.8 212 34.4
A05p28210 Brassica napus HOM05D008227 ORTHO05D010399 4.3e-19 99.4 183 36.1
BcaC05g28308 Brassica carinata HOM05D008227 ORTHO05D010399 5.6e-19 99.0 214 34.1
BraA05t21775Z Brassica rapa HOM05D008227 ORTHO05D010399 7.3e-19 98.6 183 36.1
GSVIVG01020465001 Vitis vinifera HOM05D008227 ORTHO05D010399 1.3e-18 97.8 199 34.7
AT3G20620 Arabidopsis thaliana HOM05D008227 ORTHO05D010399 1.6e-18 97.4 250 32.4
AL3G34490 Arabidopsis lyrata HOM05D008227 ORTHO05D010399 2.1e-18 97.1 250 31.6
Sp3g18660 Schrenkiella parvula HOM05D008227 ORTHO05D010399 2.1e-18 97.1 227 33.0
C05p43690 Brassica napus HOM05D008227 ORTHO05D010399 1.8e-17 94.0 214 33.6
THA.LOC104817886 Tarenaya hassleriana HOM05D008227 ORTHO05D010399 2.4e-17 93.6 222 32.0
BolC1t03010H Brassica oleracea HOM05D008227 ORTHO05D010399 9.0e-17 91.7 232 32.3
A05p28220 Brassica napus HOM05D008227 ORTHO05D010399 2.6e-16 90.1 183 35.0
BraA05t21703Z Brassica rapa HOM05D008227 ORTHO05D010399 2.6e-16 90.1 183 35.0
Lsat_1_v5_gn_7_108460 Lactuca sativa HOM05D008227 ORTHO05D010399 1.3e-15 87.8 198 33.3
Carub.0003s2059 Capsella rubella HOM05D008227 ORTHO05D010399 1.7e-15 87.4 245 30.6
Carub.0003s2060 Capsella rubella HOM05D008227 ORTHO05D010399 3.8e-15 86.3 204 31.9
Thhalv10022358m.g Eutrema salsugineum HOM05D008227 ORTHO05D010399 3.8e-15 86.3 226 33.2
AL3G34500 Arabidopsis lyrata HOM05D008227 ORTHO05D010399 4.9e-15 85.9 228 31.6
Sp3g18620 Schrenkiella parvula HOM05D008227 ORTHO05D010399 4.9e-15 85.9 232 30.2
BcaC05g28304 Brassica carinata HOM05D008227 ORTHO05D010399 8.4e-15 85.1 166 34.9
C05p43640 Brassica napus HOM05D008227 ORTHO05D010399 1.9e-14 84.0 166 34.3
C05p44400 Brassica napus HOM05D008227 ORTHO05D010399 1.9e-14 84.0 166 34.3
BolC5t33163H Brassica oleracea HOM05D008227 ORTHO05D010399 1.9e-14 84.0 166 34.3
A05p28980 Brassica napus HOM05D008227 ORTHO05D010399 2.4e-14 83.6 216 30.6
A09p39300 Brassica napus HOM05D008227 ORTHO05D010399 7.1e-14 82.0 186 32.8
A05p28890 Brassica napus HOM05D008227 ORTHO05D010399 9.3e-14 81.6 189 32.3
BraA05t21765Z Brassica rapa HOM05D008227 ORTHO05D010399 9.3e-14 81.6 189 32.3
A05p28200 Brassica napus HOM05D008227 ORTHO05D010399 2.1e-13 80.5 189 31.7
BraA05t21701Z Brassica rapa HOM05D008227 ORTHO05D010399 2.1e-13 80.5 189 31.7
BraA05t21781Z Brassica rapa HOM05D008227 ORTHO05D010399 2.7e-13 80.1 186 32.3
Sp3g08190 Schrenkiella parvula HOM05D008227 ORTHO05D010399 6.0e-13 79.0 232 30.2
C01p30770 Brassica napus HOM05D008227 ORTHO05D010399 8.7e-12 75.1 152 35.5
Migut.M01811 Erythranthe guttata HOM05D008227 ORTHO05D010399 2.1e-10 70.5 215 28.8
BcaC09g49957 Brassica carinata HOM05D008227 ORTHO05D010399 1.7e-07 60.8 154 30.5
BraA05t21702Z Brassica rapa HOM05D008227 ORTHO05D010399 1.1e-06 58.2 102 35.3
COL.COLO4_30205 Corchorus olitorius HOM05D008227 ORTHO05D010399 1.1e-06 58.2 62 43.5


User provided reference genes

Program Settings