Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G3316 Fragaria x ananassa HOM05D000067 ORTHO05D000097 1.9e-47 192.2 99 100.0
FvH4_4g27950 Fragaria vesca HOM05D000067 ORTHO05D000097 1.9e-39 165.6 94 93.6
FAN22G0017 Fragaria x ananassa HOM05D000067 ORTHO05D000097 1.4e-26 122.9 96 71.9
FAN25G2022 Fragaria x ananassa HOM05D000067 ORTHO05D000097 2.0e-25 119.0 87 74.7
FAN07G0028 Fragaria x ananassa HOM05D000067 ORTHO05D000097 3.1e-13 78.6 89 56.2
FvH4_6g11440 Fragaria vesca HOM05D000067 ORTHO05D000097 5.2e-13 77.8 89 53.9
FAN14G2132 Fragaria x ananassa HOM05D000067 ORTHO05D000097 5.2e-13 77.8 89 53.9
RcHm_v2.0_Chr6g0245681 Rosa chinensis HOM05D000067 ORTHO05D000097 6.8e-13 77.4 90 47.8
RcHm_v2.0_Chr6g0245751 Rosa chinensis HOM05D000067 ORTHO05D000097 6.8e-13 77.4 90 47.8
RcHm_v2.0_Chr7g0212441 Rosa chinensis HOM05D000067 ORTHO05D000097 1.2e-12 76.6 91 50.5
FAN14G1041 Fragaria x ananassa HOM05D000067 ORTHO05D000097 1.5e-12 76.3 89 52.8
RcHm_v2.0_Chr6g0246001 Rosa chinensis HOM05D000067 ORTHO05D000097 1.5e-12 76.3 90 47.8
RcHm_v2.0_Chr5g0059501 Rosa chinensis HOM05D000067 ORTHO05D000097 4.4e-12 74.7 90 47.8
RcHm_v2.0_Chr5g0059511 Rosa chinensis HOM05D000067 ORTHO05D000097 4.4e-12 74.7 90 47.8
FvH4_4g27952 Fragaria vesca HOM05D000067 ORTHO05D000097 5.8e-12 74.3 89 52.8
RcHm_v2.0_Chr5g0060571 Rosa chinensis HOM05D000067 ORTHO05D000097 5.8e-12 74.3 90 46.7
FAN25G1257 Fragaria x ananassa HOM05D000067 ORTHO05D000097 7.5e-12 73.9 89 52.8
FAN17G0455 Fragaria x ananassa HOM05D000067 ORTHO05D000097 9.9e-12 73.6 85 52.9
FAN02G4166 Fragaria x ananassa HOM05D000067 ORTHO05D000097 1.3e-11 73.2 89 52.8
FAN09G3984 Fragaria x ananassa HOM05D000067 ORTHO05D000097 1.3e-11 73.2 89 51.7
FAN12G1301 Fragaria x ananassa HOM05D000121 ORTHO05D000102 2.2e-11 72.4 89 51.7
RcHm_v2.0_Chr5g0060261 Rosa chinensis HOM05D000067 ORTHO05D000097 2.2e-11 72.4 90 45.6
FAN22G1761 Fragaria x ananassa HOM05D000067 ORTHO05D000097 2.9e-11 72.0 89 52.8
FvH4_4g27790 Fragaria vesca HOM05D000067 ORTHO05D000097 6.4e-11 70.9 89 53.9
FvH4_4g27941 Fragaria vesca HOM05D000067 ORTHO05D000097 7.1e-10 67.4 52 69.2
RcHm_v2.0_Chr5g0037601 Rosa chinensis HOM05D000067 ORTHO05D000097 7.1e-10 67.4 85 45.9
FAN04G1291 Fragaria x ananassa HOM05D000067 ORTHO05D000097 2.1e-09 65.9 90 45.6
FAN08G1601 Fragaria x ananassa HOM05D000067 ORTHO05D000097 2.1e-09 65.9 90 45.6
Dinv22324 Davidia involucrata HOM05D000067 ORTHO05D000097 3.5e-09 65.1 86 44.2
FvH4_5g35700 Fragaria vesca HOM05D000067 ORTHO05D000097 4.6e-09 64.7 90 44.4
RcHm_v2.0_Chr1g0326351 Rosa chinensis HOM05D000067 ORTHO05D000097 6.0e-09 64.3 91 39.6
RcHm_v2.0_Chr5g0059541 Rosa chinensis HOM05D000067 ORTHO05D000097 7.8e-09 63.9 77 46.8
FvH4_4g27943 Fragaria vesca HOM05D000067 ORTHO05D000097 2.3e-08 62.4 52 67.3
CiPaw.12G125200 Carya illinoinensis HOM05D000067 ORTHO05D000097 3.0e-08 62.0 88 43.2
FvH4_3g01590 Fragaria vesca HOM05D000067 ORTHO05D000097 3.9e-08 61.6 95 43.2
FvH4_5g06470 Fragaria vesca HOM05D000067 ORTHO05D000097 3.9e-08 61.6 91 40.7
RcHm_v2.0_Chr7g0210371 Rosa chinensis HOM05D000067 ORTHO05D000097 3.9e-08 61.6 91 42.9
FAN25G3023 Fragaria x ananassa HOM05D000067 ORTHO05D000097 5.1e-08 61.2 93 50.5
MD12G1163000 Malus domestica HOM05D000067 ORTHO05D000097 6.6e-08 60.8 90 45.6
RcHm_v2.0_Chr4g0418071 Rosa chinensis HOM05D000067 ORTHO05D000097 8.6e-08 60.5 93 43.0
RcHm_v2.0_Chr6g0246011 Rosa chinensis HOM05D000067 ORTHO05D000097 8.6e-08 60.5 84 42.9
FvH4_5g06530 Fragaria vesca HOM05D000067 ORTHO05D000097 1.5e-07 59.7 91 37.4
FAN13G2368 Fragaria x ananassa HOM05D000067 ORTHO05D000097 1.5e-07 59.7 91 38.5
MD07G1269200 Malus domestica HOM05D000067 ORTHO05D000097 1.9e-07 59.3 91 42.9
Prupe.4G191000 Prunus persica HOM05D000067 ORTHO05D000097 1.9e-07 59.3 94 40.4
CiPaw.11G181100 Carya illinoinensis HOM05D000067 ORTHO05D000097 2.5e-07 58.9 85 41.2
MD12G1162900 Malus domestica HOM05D000067 ORTHO05D000097 2.5e-07 58.9 53 58.5
Prupe.4G238800 Prunus persica HOM05D000067 ORTHO05D000097 2.5e-07 58.9 95 40.0
CiPaw.11G181800 Carya illinoinensis HOM05D000067 ORTHO05D000097 4.3e-07 58.2 82 40.2
TAR626G0067 Trochodendron aralioides HOM05D000067 ORTHO05D000097 4.3e-07 58.2 94 38.3
GSVIVG01014569001 Vitis vinifera HOM05D000067 ORTHO05D000097 5.6e-07 57.8 89 40.4
Prupe.4G190700 Prunus persica HOM05D000067 ORTHO05D000097 7.3e-07 57.4 94 39.4
RcHm_v2.0_Chr5g0036921 Rosa chinensis HOM05D000067 ORTHO05D000097 7.3e-07 57.4 91 38.5
RcHm_v2.0_Chr7g0227831 Rosa chinensis HOM05D000067 ORTHO05D000097 7.3e-07 57.4 91 41.8
FAN01G2138 Fragaria x ananassa HOM05D000067 ORTHO05D000097 9.5e-07 57.0 83 44.6
Prupe.4G190800 Prunus persica HOM05D000067 ORTHO05D000097 9.5e-07 57.0 80 41.2
GSVIVG01036333001 Vitis vinifera HOM05D000067 ORTHO05D000097 9.5e-07 57.0 86 40.7
GSVIVG01036361001 Vitis vinifera HOM05D000067 ORTHO05D000097 9.5e-07 57.0 86 40.7
GSVIVG01014566001 Vitis vinifera HOM05D000067 ORTHO05D000097 1.2e-06 56.6 89 41.6
FAN10G0071 Fragaria x ananassa HOM05D000067 ORTHO05D000097 1.6e-06 56.2 83 44.6
FAN10G1768 Fragaria x ananassa HOM05D000067 ORTHO05D000097 1.6e-06 56.2 83 44.6
RcHm_v2.0_Chr1g0326011 Rosa chinensis HOM05D000067 ORTHO05D000097 1.6e-06 56.2 91 44.0
Prupe.4G238900 Prunus persica HOM05D000067 ORTHO05D000097 2.1e-06 55.8 95 38.9
CiPaw.11G181500 Carya illinoinensis HOM05D000067 ORTHO05D000097 2.8e-06 55.5 82 39.0
MD12G1163400 Malus domestica HOM05D000067 ORTHO05D000097 3.6e-06 55.1 90 42.2
CiPaw.15G083100 Carya illinoinensis HOM05D000067 ORTHO05D000097 4.7e-06 54.7 55 56.4
FAN18G2125 Fragaria x ananassa HOM05D000067 ORTHO05D000097 4.7e-06 54.7 52 55.8
Prupe.4G199200 Prunus persica HOM05D000067 ORTHO05D000097 4.7e-06 54.7 95 38.9
Actinidia09944 Actinidia chinensis HOM05D000067 ORTHO05D000097 6.2e-06 54.3 82 40.2
Cfa020443 Carpinus fangiana HOM05D000067 ORTHO05D000097 6.2e-06 54.3 91 39.6
Cfa020465 Carpinus fangiana HOM05D000067 ORTHO05D000097 6.2e-06 54.3 87 41.4
Dinv20588 Davidia involucrata HOM05D000067 ORTHO05D000097 6.2e-06 54.3 51 52.9
FAN13G1677 Fragaria x ananassa HOM05D000067 ORTHO05D000097 6.2e-06 54.3 94 39.4
RcHm_v2.0_Chr1g0326051 Rosa chinensis HOM05D000067 ORTHO05D000097 6.2e-06 54.3 91 42.9
RcHm_v2.0_Chr1g0326061 Rosa chinensis HOM05D000067 ORTHO05D000097 6.2e-06 54.3 91 42.9
RcHm_v2.0_Chr1g0326071 Rosa chinensis HOM05D000067 ORTHO05D000097 6.2e-06 54.3 91 42.9
GSVIVG01036346001 Vitis vinifera HOM05D000067 ORTHO05D000097 6.2e-06 54.3 66 48.5
CSS0031462 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 8.1e-06 53.9 93 39.8
FvH4_3g21490 Fragaria vesca HOM05D000067 ORTHO05D000097 8.1e-06 53.9 90 37.8
RcHm_v2.0_Chr1g0326251 Rosa chinensis HOM05D000067 ORTHO05D000097 8.1e-06 53.9 79 40.5
GSVIVG01036315001 Vitis vinifera HOM05D000067 ORTHO05D000097 8.1e-06 53.9 86 38.4


User provided reference genes

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