Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G3269 Fragaria x ananassa HOM05D000188 ORTHO05D005820 1.0e-149 533.5 288 100.0
FvH4_3g12391 Fragaria vesca HOM05D000188 ORTHO05D005820 6.0e-94 348.2 317 61.8
RcHm_v2.0_Chr4g0407481 Rosa chinensis HOM05D000188 ORTHO05D005820 2.3e-69 266.5 311 49.2
FAN17G2674 Fragaria x ananassa HOM05D000188 ORTHO05D005820 2.5e-63 246.5 303 48.2
FvH4_4g11281 Fragaria vesca HOM05D000188 ORTHO05D005820 5.5e-63 245.4 315 46.3
FAN07G2807 Fragaria x ananassa HOM05D000188 ORTHO05D005820 6.1e-62 241.9 315 46.3
FAN22G0235 Fragaria x ananassa HOM05D004311 ORTHO05D005820 1.0e-56 224.6 304 45.1
Prupe.1G566100 Prunus persica HOM05D000188 ORTHO05D005820 1.8e-45 187.2 309 38.2
FAN21G1893 Fragaria x ananassa HOM05D000188 ORTHO05D005820 4.4e-44 182.6 119 75.6
Cfa005533 Carpinus fangiana HOM05D000188 ORTHO05D005820 3.2e-39 166.4 310 36.1
Migut.B01093 Erythranthe guttata HOM05D000188 ORTHO05D005820 4.7e-38 162.5 318 34.9
TAR381G0525 Trochodendron aralioides HOM05D000188 ORTHO05D005820 3.0e-37 159.8 307 33.6
MSTRG.16550 Avicennia marina HOM05D000188 ORTHO05D005820 4.0e-37 159.5 309 34.0
TAR381G1388 Trochodendron aralioides HOM05D000188 ORTHO05D005820 5.2e-37 159.1 307 33.6
MD15G1420100 Malus domestica HOM05D000188 ORTHO05D005820 8.8e-37 158.3 317 36.3
TWI63G0932 Tripterygium wilfordii HOM05D000188 ORTHO05D005820 8.8e-37 158.3 316 34.2
CANSAT01G0244 Cannabis sativa HOM05D000188 ORTHO05D005820 1.5e-36 157.5 310 34.8
Thecc.02G042000 Theobroma cacao HOM05D000188 ORTHO05D005820 2.6e-36 156.8 312 34.6
Manes.09G064900 Manihot esculenta HOM05D000188 ORTHO05D005820 9.8e-36 154.8 271 38.0
Actinidia33833 Actinidia chinensis HOM05D000188 ORTHO05D005820 1.3e-35 154.5 308 35.1
Gohir.D02G232100 Gossypium hirsutum HOM05D000188 ORTHO05D005820 1.3e-35 154.5 312 34.3
COL.COLO4_17905 Corchorus olitorius HOM05D000188 ORTHO05D005820 1.7e-35 154.1 317 34.4
Gohir.A03G210500 Gossypium hirsutum HOM05D000188 ORTHO05D005820 1.7e-35 154.1 312 34.6
Gorai.005G259800 Gossypium raimondii HOM05D000188 ORTHO05D005820 1.7e-35 154.1 312 34.3
Potri.017G056700 Populus trichocarpa HOM05D000188 ORTHO05D005820 2.2e-35 153.7 312 34.9
Sabra17G0048400 Salix brachista HOM05D000188 ORTHO05D005820 2.2e-35 153.7 312 34.6
EL10Ac3g04985 Beta vulgaris HOM05D000188 ORTHO05D005820 2.8e-35 153.3 310 32.9
CiPaw.05G041600 Carya illinoinensis HOM05D000188 ORTHO05D005820 2.8e-35 153.3 310 34.8
CSS0038654 Camellia sinensis var. sinensis HOM05D000188 ORTHO05D005820 3.7e-35 152.9 308 34.7
Sabra17G0050100 Salix brachista HOM05D000188 ORTHO05D005820 3.7e-35 152.9 312 34.6
Ciclev10000289m.g Citrus clementina HOM05D000188 ORTHO05D005820 6.3e-35 152.1 310 34.8
Nitab4.5_0009570g0040 Nicotiana tabacum HOM05D000188 ORTHO05D005820 8.3e-35 151.8 309 33.7
AUR62015550 Chenopodium quinoa HOM05D000188 ORTHO05D005820 4.1e-34 149.4 309 34.0
Aqoxy6G00391 Aquilegia oxysepala HOM05D000188 ORTHO05D005820 5.4e-34 149.1 311 33.1
CsaV3_6G051830 Cucumis sativus L. HOM05D000188 ORTHO05D005820 5.4e-34 149.1 314 33.1
Cc02_g22110 Coffea canephora HOM05D000188 ORTHO05D005820 7.0e-34 148.7 309 32.4
Dinv19342 Davidia involucrata HOM05D000188 ORTHO05D005820 9.2e-34 148.3 308 32.8
MELO3C023175.2 Cucumis melo HOM05D000188 ORTHO05D005820 1.2e-33 147.9 314 32.8
Lj1A922G72 Lonicera japonica HOM05D000188 ORTHO05D005820 1.6e-33 147.5 307 33.9
ClCG04G000310 Citrullus lanatus HOM05D000188 ORTHO05D005820 2.7e-33 146.7 343 31.8
Aa31LG9G1850 Aethionema arabicum HOM05D000188 ORTHO05D005820 4.5e-33 146.0 316 33.2
AUR62002160 Chenopodium quinoa HOM05D000188 ORTHO05D005820 4.5e-33 146.0 309 33.7
PGSC0003DMG401029775 Solanum tuberosum HOM05D000188 ORTHO05D005820 7.8e-33 145.2 311 33.4
Sopen01g047150 Solanum pennellii HOM05D000188 ORTHO05D005820 1.0e-32 144.8 310 32.6
Lalb_Chr07g0189271 Lupinus albus HOM05D000188 ORTHO05D005820 1.3e-32 144.4 310 33.2
Oeu000646.1 Olea europaea HOM05D000188 ORTHO05D005820 1.3e-32 144.4 308 33.4
Solyc01g104640.3 Solanum lycopersicum HOM05D000188 ORTHO05D005820 1.3e-32 144.4 310 32.6
Hund08241 Selenicereus undatus HOM05D000188 ORTHO05D005820 2.3e-32 143.7 312 34.9
GSVIVG01014679001 Vitis vinifera HOM05D000188 ORTHO05D005820 2.9e-32 143.3 310 32.6
Ah.08g217650 Amaranthus hybridus HOM05D000188 ORTHO05D005820 3.8e-32 142.9 313 32.9
CAN.G1702.2 Capsicum annuum HOM05D000188 ORTHO05D005820 5.0e-32 142.5 312 33.0
Atru.chr6.975 Acer truncatum HOM05D000188 ORTHO05D005820 8.6e-32 141.7 316 32.9
Lsat_1_v5_gn_7_79440 Lactuca sativa HOM05D000188 ORTHO05D005820 8.6e-32 141.7 312 34.3
SGA_v2.0_scaffold114G31907 Striga asiatica HOM05D000188 ORTHO05D005820 8.6e-32 141.7 327 31.2
Duzib132G1041 Durio zibethinus HOM05D000188 ORTHO05D005820 1.9e-31 140.6 245 39.2
Phvul.008G162900 Phaseolus vulgaris HOM05D000188 ORTHO05D005820 4.3e-31 139.4 308 32.8
Peaxi162Scf01290g00247 Petunia axillaris HOM05D000188 ORTHO05D005820 5.6e-31 139.0 310 32.6
VMungo0251G1433 Vigna mungo HOM05D000188 ORTHO05D005820 9.5e-31 138.3 316 33.5
Lj4g0023932 Lotus japonicus HOM05D000188 ORTHO05D005820 1.2e-30 137.9 310 33.5
vmacro19905 Vaccinium macrocarpon HOM05D000188 ORTHO05D005820 1.2e-30 137.9 338 30.8
arahy.Tifrunner.gnm1.ann1.WDPT5N Arachis hypogaea HOM05D000188 ORTHO05D005820 2.1e-30 137.1 311 33.4
Nn6g35175 Nelumbo nucifera HOM05D000188 ORTHO05D005820 2.1e-30 137.1 307 32.2
Glyma.08G077500 Glycine max HOM05D000188 ORTHO05D005820 3.6e-30 136.3 314 32.2
A01p21960 Brassica napus HOM05D000188 ORTHO05D005820 8.0e-30 135.2 319 32.9
BolC1t02675H Brassica oleracea HOM05D000188 ORTHO05D005820 8.0e-30 135.2 316 32.9
BraA01t02102Z Brassica rapa HOM05D000188 ORTHO05D005820 8.0e-30 135.2 319 32.9
BcaNung00260 Brassica carinata HOM05D000188 ORTHO05D005820 1.0e-29 134.8 315 32.7
Thhalv10024423m.g Eutrema salsugineum HOM05D000188 ORTHO05D005820 1.0e-29 134.8 314 32.2
TPR.G29922 Trifolium pratense HOM05D000188 ORTHO05D005820 1.0e-29 134.8 311 32.8
Sp7g13870 Schrenkiella parvula HOM05D000188 ORTHO05D005820 1.8e-29 134.0 312 33.0
arahy.Tifrunner.gnm1.ann1.5NM8YJ Arachis hypogaea HOM05D000188 ORTHO05D005820 4.0e-29 132.9 317 32.8
BcaC09g50255 Brassica carinata HOM05D000188 ORTHO05D005820 8.9e-29 131.7 318 32.4
C01p27320 Brassica napus HOM05D000188 ORTHO05D005820 8.9e-29 131.7 318 32.4
PGR142G0377 Punica granatum HOM05D000188 ORTHO05D005820 8.9e-29 131.7 325 30.8
AT4G15570 Arabidopsis thaliana HOM05D000188 ORTHO05D005820 1.2e-28 131.3 314 30.9
Haze_01643 Corylus avellana HOM05D000188 ORTHO05D005820 1.2e-28 131.3 395 28.4
HanXRQChr11g0337501 Helianthus annuus HOM05D000188 ORTHO05D005820 1.5e-28 131.0 315 32.1
CDE04G0462 Ceratophyllum demersum HOM05D000188 ORTHO05D005820 2.0e-28 130.6 316 32.3
Haze_01647 Corylus avellana HOM05D000188 ORTHO05D005820 2.0e-28 130.6 395 27.8
A10p30980 Brassica napus HOM05D000188 ORTHO05D005820 3.4e-28 129.8 312 33.3
BraA10t45143Z Brassica rapa HOM05D000188 ORTHO05D005820 3.4e-28 129.8 315 32.1
AL7G39910 Arabidopsis lyrata HOM05D000188 ORTHO05D005820 4.4e-28 129.4 314 30.6
ATR0584G205 Amborella trichopoda HOM05D000188 ORTHO05D005820 7.5e-28 128.6 310 34.2
Psat6g089240 Pisum sativum HOM05D000188 ORTHO05D005820 1.3e-27 127.9 312 31.4
BolC9t59912H Brassica oleracea HOM05D000188 ORTHO05D005820 2.2e-27 127.1 316 32.3
Os03g0440200 Oryza sativa ssp. japonica HOM05D000188 ORTHO05D005820 2.2e-27 127.1 310 31.3
Os04g0424200 Oryza sativa ssp. japonica HOM05D000188 ORTHO05D005820 2.2e-27 127.1 310 31.3
Os06g0310200 Oryza sativa ssp. japonica HOM05D000188 ORTHO05D005820 2.2e-27 127.1 310 31.3
THA.LOC104820240 Tarenaya hassleriana HOM05D000188 ORTHO05D005820 2.9e-27 126.7 306 32.4
Carub.0007s2624 Capsella rubella HOM05D000188 ORTHO05D005820 3.7e-27 126.3 314 30.6
ECA236G2078 Erigeron canadensis HOM05D000188 ORTHO05D005820 8.3e-27 125.2 313 32.3
SEGI_32871 Sequoiadendron giganteum HOM05D000188 ORTHO05D005820 5.4e-26 122.5 307 29.3
CARHR290000 Cardamine hirsuta HOM05D000188 ORTHO05D005820 9.2e-26 121.7 314 29.6
PSO675G5913 Papaver somniferum HOM05D000188 ORTHO05D005820 3.5e-25 119.8 314 29.6
unitig_27.g24936 Utricularia gibba HOM05D000188 ORTHO05D005820 3.5e-25 119.8 279 31.2
PSO541G1917 Papaver somniferum HOM05D000188 ORTHO05D005820 7.8e-25 118.6 314 29.6
Zm00001eb214930 Zea mays HOM05D000188 ORTHO05D005820 7.8e-25 118.6 312 30.8
Medtr5g053930 Medicago truncatula HOM05D000188 ORTHO05D005820 2.3e-24 117.1 312 30.8
Sed0014594 Sechium edule HOM05D000188 ORTHO05D005820 6.6e-24 115.5 272 33.8
Hma1.2p1_1712F.1_g298830 Hydrangea macrophylla HOM05D000188 ORTHO05D005820 1.5e-20 104.4 261 29.1
MBI05_g33207_MAGBIO Magnolia biondii HOM05D000188 ORTHO05D005820 1.9e-18 97.4 261 31.0
Rhsim05G0184900 Rhododendron simsii HOM05D000188 ORTHO05D005820 1.6e-17 94.4 154 37.7
Pp3c6_5360 Physcomitrium patens HOM05D000188 ORTHO05D005820 4.6e-17 92.8 312 29.2
DCAR_029234 Daucus carota HOM05D000188 ORTHO05D005820 1.0e-16 91.7 145 41.4
SHI16849 Sapria himalayana HOM05D000188 ORTHO05D005820 3.9e-16 89.7 87 51.7
Eucgr.E02742 Eucalyptus grandis HOM05D000188 ORTHO05D005820 1.1e-15 88.2 97 47.4
Sc08g0003990 Simmondsia chinensis HOM05D000188 ORTHO05D005820 2.1e-14 84.0 82 51.2
SEGI_25554 Sequoiadendron giganteum HOM05D000188 ORTHO05D005820 1.4e-13 81.3 142 34.5
BcaC06g32230 Brassica carinata HOM05D000188 ORTHO05D005820 5.2e-13 79.3 102 43.1
Cpa.g.sc301.3 Carica papaya HOM05D002578 ORTHO05D005820 1.5e-12 77.8 144 38.2
HPP92_019359 Vanilla planifolia HOM05D000188 ORTHO05D005820 1.5e-12 77.8 79 48.1
Mapoly0048s0059 Marchantia polymorpha HOM05D000188 ORTHO05D005820 2.6e-12 77.0 321 24.9
HPP92_019360 Vanilla planifolia HOM05D000188 ORTHO05D005820 4.4e-12 76.3 134 39.6
SHI16851 Sapria himalayana HOM05D000188 ORTHO05D005820 9.8e-12 75.1 140 35.0
Phvul.002G203001 Phaseolus vulgaris HOM05D000188 ORTHO05D005820 2.4e-10 70.5 92 43.5
AagrBONN_evm.TU.Sc2ySwM_228.2059 Anthoceros agrestis HOM05D000188 ORTHO05D005820 3.2e-10 70.1 309 25.9
SMO174G0214 Selaginella moellendorffii HOM05D000188 ORTHO05D005820 1.3e-08 64.7 270 26.7


User provided reference genes

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