Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 6.8e-159 563.9 282 100.0
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 4.6e-155 551.2 282 98.2
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.0e-154 550.1 282 97.5
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 6.2e-144 514.2 282 92.2
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.1e-140 503.4 290 89.0
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 7.1e-140 500.7 282 90.4
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 8.7e-122 440.7 283 80.2
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 4.1e-119 431.8 285 77.5
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 2.0e-110 402.9 295 71.9
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 1.1e-108 397.1 306 69.9
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 1.6e-107 393.3 293 70.6
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 4.7e-107 391.7 294 69.4
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 6.7e-106 387.9 296 70.3
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 6.7e-106 387.9 294 69.4
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 3.3e-105 385.6 294 69.4
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 2.4e-103 379.4 297 68.7
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 5.0e-101 371.7 290 69.0
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 1.9e-100 369.8 289 68.9
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 4.2e-100 368.6 289 68.5
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 5.5e-100 368.2 279 68.8
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 7.2e-100 367.9 293 67.6
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 9.4e-100 367.5 264 73.5
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 2.1e-99 366.3 295 67.5
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 1.8e-98 363.2 298 66.1
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 4.0e-98 362.1 295 65.1
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 4.0e-98 362.1 293 66.9
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 1.5e-97 360.1 266 69.9
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 3.3e-97 359.0 299 64.5
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 3.3e-97 359.0 291 66.3
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 5.7e-97 358.2 296 66.6
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 9.7e-97 357.5 295 66.1
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 9.7e-97 357.5 286 67.1
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 1.7e-96 356.7 281 66.5
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 8.2e-96 354.4 267 70.8
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 8.2e-96 354.4 216 81.9
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 8.2e-96 354.4 281 66.9
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 8.2e-96 354.4 292 66.1
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 1.1e-95 354.0 292 65.8
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 1.4e-95 353.6 297 65.3
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 4.1e-95 352.1 307 64.5
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 5.3e-95 351.7 295 65.8
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 7.0e-95 351.3 291 65.6
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 9.1e-95 350.9 295 65.1
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 2.0e-94 349.7 217 80.6
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 1.3e-93 347.1 300 63.3
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 1.3e-93 347.1 293 65.2
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 1.7e-93 346.7 274 67.5
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 2.2e-93 346.3 217 79.3
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 2.2e-93 346.3 292 65.4
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 8.5e-93 344.4 293 64.2
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 1.1e-92 344.0 300 64.0
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 1.5e-92 343.6 290 65.9
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 1.9e-92 343.2 294 62.6
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 5.5e-92 341.7 277 65.7
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 5.5e-92 341.7 296 63.5
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 5.5e-92 341.7 294 63.6
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 1.2e-91 340.5 287 64.5
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 8.0e-91 337.8 271 67.5
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 1.0e-90 337.4 285 64.2
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 3.0e-90 335.9 271 67.9
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 5.2e-90 335.1 276 63.8
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 8.8e-90 334.3 287 64.5
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 3.7e-88 328.9 208 78.8
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 8.3e-88 327.8 251 69.3
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 1.8e-87 326.6 295 63.4
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 5.4e-87 325.1 217 75.1
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 7.0e-87 324.7 267 64.0
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 1.6e-86 323.6 229 73.8
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 2.0e-86 323.2 273 63.7
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 3.5e-86 322.4 219 74.0
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 4.5e-86 322.0 285 61.8
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 4.5e-86 322.0 251 64.9
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 1.3e-85 320.5 225 72.4
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 2.9e-85 319.3 239 71.1
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 3.8e-85 318.9 221 72.9
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 5.0e-85 318.5 288 61.1
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 9.4e-84 314.3 247 68.0
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 1.6e-83 313.5 239 69.5
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 2.1e-83 313.2 198 77.8
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 6.1e-83 311.6 205 76.1
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 6.1e-83 311.6 208 76.0
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 6.1e-83 311.6 234 66.7
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 1.0e-82 310.8 239 69.0
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 2.3e-82 309.7 241 68.9
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 5.2e-82 308.5 240 68.8
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 5.2e-82 308.5 240 68.8
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 5.2e-82 308.5 240 68.8
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 5.2e-82 308.5 240 68.3
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 3.4e-81 305.8 208 74.5
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 4.4e-81 305.4 240 69.2
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 6.3e-80 301.6 209 71.8
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 1.6e-78 297.0 195 74.9
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 2.3e-77 293.1 291 58.1
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 1.2e-75 287.3 225 65.8
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 3.4e-73 279.3 210 63.8
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 1.3e-72 277.3 247 62.8
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 2.9e-72 276.2 287 57.5
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 2.0e-70 270.0 182 75.3
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 5.9e-70 268.5 256 57.4
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 7.0e-63 245.0 200 60.5
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 1.6e-59 233.8 200 57.0
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 6.4e-48 195.3 136 74.3
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 8.4e-48 194.9 181 60.2
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 1.6e-46 190.7 193 51.8
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 3.5e-46 189.5 102 85.3
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 7.3e-36 155.2 104 73.1
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 3.0e-29 133.3 81 80.2
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 7.6e-25 118.6 133 51.9
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 2.2e-24 117.1 84 66.7
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 8.4e-24 115.2 71 80.3
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 3.5e-14 83.2 97 41.2
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 4.6e-14 82.8 110 42.7
PRCOL_00005158 Prasinoderma coloniale HOM05D006957 ORTHO05D008647 5.9e-09 65.9 175 29.1
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 7.6e-09 65.5 97 41.2
Cpa.g.sc1199.4 Carica papaya HOM05D006957 ORTHO05D008647 1.0e-08 65.1 35 91.4
Nn1g08227 Nelumbo nucifera HOM05D006957 ORTHO05D008647 1.7e-08 64.3 116 41.4


User provided reference genes

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